Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq51813 214 1e-50
seq80369 113 4e-20
seq89394 102 7e-17
seq49094 100 2e-16
seq22409 93.3 3e-14
seq98588 89.7 4e-13
>seq51813
Length=3444
Score = 214 bits (236), Expect = 1e-50
Identities = 597/905 (66%), Gaps = 21/905 (2%)
Strand=Plus/Plus
Query 100328 TAATCGACAACGCCGTCTTCCCAAGTGCCGGTCACGGGCCCGGCAGCTGTGCCTGTGAA- 100386
||||| || || ||||||| |||||| || | || || || | ||| ||||||||||
Sbjct 378 TAATCCACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAG 437
Query 100387 --ATAGTTGTCACCGTCATAGCCCGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACG 100444
| |||||| ||| || | ||||| |||||||| || || |||||||||||
Sbjct 438 GGAATGTTGTCTTCGTAAT---CATGAACGCCAGTCCAACCACGACCATACATGGCAACA 494
Query 100445 CCCACAATAATTTTGCGCGGGTCCACGCCCTGGTTCGTGAGCAATTTCACGGCGTGATCC 100504
|| | | ||| || || | ||| ||||| | | |||| || || ||
Sbjct 495 CCTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAATATTTTACTCCGAAGTCA 554
Query 100505 GTGTTGTACAGCTCGTTCGGGTTCCAACTCGGCGCGTAGAGAGTGGTTTGGTAGCCCAAA 100564
| |||| || || || ||||| |||||||| | | ||||| | || | |
Sbjct 555 GATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA 614
Query 100565 TCGGTGTTTGACCAGGCGCCTTTAAAATCGTAGCTCAT-AAGAAATATTTTATCGAGAAG 100623
| ||||||||||| || || || || |||||||| |||||| || | ||| | |
Sbjct 615 GTGTCATTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAA-ATATGATCCATATA 673
Query 100624 CTTTTGCGCAACGTCGTACTGTACCACAGCAATTTTGTCATAGCCGGAACTGATTGCGCT 100683
||||| || | |||| | || || ||||| || | || || || || ||
Sbjct 674 ATTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGA 733
Query 100684 TGTCAACTCGTACGTTTTGCCCGTTTGCAGTTGT-AGCTGGTCCAGCATCGCGCGCAATT 100742
||||| ||||| | ||||| | | || || |||| || |||||| | || ||||
Sbjct 734 AGTCAATTCGTATTTCTTGCCATTCTT-AGCTGAGAGCTCATCGAGCATCTCACGTAATT 792
Query 100743 CCTTCAGTAAAATGTTGTACGTGTCGGCGTCGCGCTCCCCGTTGCCAAGAGTC-GGGTTG 100801
| |||| ||| | || || | || || | | || || ||| |||||
Sbjct 793 CTTTCATCAAACTTACATAGCAATCACCATCT---TCTGGGCTACCGAG-GTCAGGGTTA 848
Query 100802 GCGCCTTTGCCGCCCGGAAACTCCCAGTCAATGTCCACGCCGTCAAAAAACTTCCACACC 100861
|| |||||||| || ||||||||||| || || || || || || || || |||||
Sbjct 849 GCACCTTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTT 908
Query 100862 TGCAAAAATTCCTTGACCGAGTCCACAAACACGCGCCGTTTTTCCGCATCGTGCATGAAA 100921
| | ||| ||||| || || | |||||| || | | | | | | | |||
Sbjct 909 AGAAGAAACTCCTTTACTGACTGCACAAAT---CGTGTTCTCTTAGATTTATCAACTAAA 965
Query 100922 TAGAAC---GGGTCGGACAACGTCCAGCCGCCGATGGACGGCAGAATTTTGAGGTGCGGA 100978
|||| || |||| | |||||| || || || || || ||||| || | | |||
Sbjct 966 AAGAAAAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCCGGG 1025
Query 100979 TTGGCCAGCTTGGCCGCCATTAGCTGACCGAAATTGCCCTTGTACGGCTCGTTCCATGCG 101038
||| | || | ||||| || ||||| ||||| ||||| |||||||||||||
Sbjct 1026 CGGGCTTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTCGTTCCATGAA 1085
Query 101039 GACACGCCCTTTTGCGGTTTTTGTATTGCGGCCCAGGGATCGTGAATGGCGACTTTGAAA 101098
|||| || ||||| |||||||||| ||| ||||| |||||||| || | |||||| ||
Sbjct 1086 GACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAG 1145
Query 101099 TCTGAACGACCCTTGCAGGAGCGCTGCAGCGCTTCAAAACTGCCGGGAATGGTTTTGAGG 101158
|| ||| || | ||||| || ||||| |||| |||||||| || ||| | |
Sbjct 1146 TCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAG 1205
Query 101159 GCGTCGTTGAGGCCGTCGCCGCCGCAAATGGGTATGAACCCGTACAACAGATGCGAGAGA 101218
||| || | |||||| |||||||||||||| || || || || | || ||| | |||
Sbjct 1206 CTGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGA 1265
Query 101219 TTGGG 101223
|| ||
Sbjct 1266 TTAGG 1270
>seq80369
Length=3501
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886
|||||||| | |||| ||| ||||| || ||||||||||| | | ||| | ||
Sbjct 407 CTTAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGATAGCGTTCTAGCA 348
Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946
||||| || || ||||| ||| | ||||| ||||||||||| || | |||||| |||
Sbjct 347 TCCTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTG 288
Query 18947 TCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATG 19006
|| | || || |||||| | ||| |||||| | || ||| ||| | || ||
Sbjct 287 TCTTCTATCTTTGCTTTTACATTCTCGATAGTATCACTAGACTCTACTTCCAATGTTATT 228
Query 19007 GTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || |||||||| ||||| ||||| || |||||
Sbjct 227 GTCTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193
>seq89394
Length=1369
Score = 102 bits (112), Expect = 7e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 25230 CGCAAAAACGGGCATTGCGGCGCCCATTTTTGATGATCGCGAGCCGGGTCGTCGCCCGCC 25289
|||| || || ||||| |||||||| ||| || || || || |||||||||||
Sbjct 527 CGCAGGAAGGGACATTGGGGCGCCCACCGTTGGTGGTCCTTGGCGGGATCGTCGCCCGCT 468
Query 25290 TCCCAGCGCATAATCTCCACTTTGCAAAACGCGCAGCGCACTTCGTCGCCGCGTCCCAAG 25349
|||| |||||| || ||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct 467 ACCCATTTCATAATTTCTACTTTACAAAACGCGCAGCGTACTTCATCGCCGCGGCCCAGG 408
Query 25350 TAGTAGAACCCATT 25363
|| ||||| || ||
Sbjct 407 TAATAGAAGCCGTT 394
>seq49094
Length=1117
Score = 100 bits (110), Expect = 2e-16
Identities = 163/234 (70%), Gaps = 8/234 (3%)
Strand=Plus/Minus
Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872
|||| |||| || || || || | |||||| ||||| ||||| ||||||||||| || |
Sbjct 457 TTCCACCTCTCAGCCGTAGTACTAAGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 398
Query 18873 CCATTGTTTTGGCGTCC----TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCC 18928
| ||| |||||| || ||||| || || ||| |||||||||| || |||||
Sbjct 397 ATAGTGT----GCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCT 342
Query 18929 ACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGC 18988
||| | ||||||||| || |||||| || || | | | ||||| ||
Sbjct 341 GGGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCT 282
Query 18989 TCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042
||| ||| | || || || || ||||| | || || |||||||||||||||
Sbjct 281 TCCACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 228
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898
||||| ||||| ||||| ||||||||||| || | || ||| | || || |||||
Sbjct 887 TGCAAGGTAGATTCCTTCTGAATATTGTAGTCTGACAGTGTACGTCCATCTTCGAGCTGC 828
Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958
|| || ||| |||| ||||| |||||||| ||| | ||||||||| || ||||||
Sbjct 827 TTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCCTGAATTTTT 768
Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018
|| || | | | ||||| || ||| ||| | || || || || |||||
Sbjct 767 GCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTCTTGCCTGTC 708
Query 19019 AAAGTTTTGACAAAAATTTGCATT 19042
| || || |||||||||||||||
Sbjct 707 AGTGTCTTTACAAAAATTTGCATT 684
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| |||||| || || ||||| |||||||| ||||| | || || | || ||
Sbjct 666 CACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCTTC 607
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|||||||| || ||| ||||||| ||||| || || || | || ||||||||
Sbjct 606 TAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTGTCTTG 547
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
|||||| || || | | | ||||| || ||| ||| | ||||| |||||
Sbjct 546 AATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATCGTTTT 487
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042
|| || | || || |||||||||||||||
Sbjct 486 GCCAGTCAGTGTCTTTACAAAAATTTGCATT 456
>seq22409
Length=1756
Score = 93.3 bits (102), Expect = 3e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898
||||| || || ||||||||||| ||||| || | || ||| | || || ||||||
Sbjct 1461 TGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGT 1520
Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958
||||| ||| | || | | ||||| || || | || || || || |||||||
Sbjct 1521 TTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTC 1580
Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGC-TCCGTTTCGACGGTAATGGTTTTACCTGT 19017
|||||| | | | |||||| |||| ||| |||| ||||||||||||||| ||
Sbjct 1581 GCTTTTACATTTTCTATAGTATC-AGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGT 1639
Query 19018 TAAAGTTTTGACAAAAATTTGCATT 19042
| || ||||| ||||||||||||
Sbjct 1640 AAGGGTCTTGACGAAAATTTGCATT 1664
>seq98588
Length=355
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18830 AACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC 18889
|| |||| ||| | ||||| || |||||||| ||||| || | | || | ||
Sbjct 325 AATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGACCATCT 266
Query 18890 TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCG 18949
|||| || ||||| ||| | ||||| | ||||||||| || | ||||||||||||
Sbjct 265 TCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 206
Query 18950 GCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTT 19009
||||| |||||| | | | |||||| || ||| ||| | ||||||||
Sbjct 205 TGGATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTC 146
Query 19010 TTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || |||| ||||| |||||||| |||||
Sbjct 145 TTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413195267605372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |