Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq38040 111 1e-19 seq22409 104 1e-17 seq98588 102 5e-17 seq49094 82.4 5e-11 >seq38040 Length=2861 Score = 111 bits (122), Expect = 1e-19 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| || |||| ||||| || | || || |||||||| || ||||| || || Sbjct 2464 ACCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGA 2523 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | || | ||| ||||||||||||||| ||| || |||||||| || || | || Sbjct 2524 AAGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGG 2583 Query 33262 TATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||||||||| || || | ||| || || ||| ||| ||||| | || Sbjct 2584 AATGCCTTCTTTGTCTTGAATTTTAGCC---TTAACATTTTCAATTGTGTCAGAAGCTTC 2640 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || | || || |||||||| ||||| ||||| || ||||||||||| Sbjct 2641 AACTTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 Score = 100 bits (110), Expect = 2e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | || |||||||| || |||||||||||||||||| || | || ||| Sbjct 1799 ACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCC 1858 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---G 33277 |||||||| ||| |||||| | ||| || ||||| | ||| |||||||| || || Sbjct 1859 AATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGT 1918 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || | | || ||||| |||| || ||||| || || || Sbjct 1919 ATTTTAGCC---TTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTC 1975 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| || | ||||| || || |||||||| Sbjct 1976 TTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| || |||| || | || | || || |||||||| |||||||| ||||| Sbjct 2236 ACCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGA 2295 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | || | || ||||||||||| ||| ||| || | |||||| || || | || Sbjct 2296 TAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGG 2355 Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || |||||||| || | | | ||| ||||| ||| ||| ||||| || | Sbjct 2356 GATACCTTCTTTGTCTTGGATTTTAGCC---TTTACATTTTCAATTGTGTCAGATGGCTC 2412 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || |||||||| || ||||| || || || || || || |||||||| Sbjct 2413 CACCTCTAGAGTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2463 >seq22409 Length=1756 Score = 104 bits (114), Expect = 1e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||| | ||||||||| || || ||||| || ||||| |||||||| | || || || Sbjct 1454 CACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 1513 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279 | || || ||| ||| || |||||||||||||| | || || ||||| || || Sbjct 1514 TAGCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 1573 Query 33280 AATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTT 33339 ||| | |||||| ||| || || || || || || || || || || ||||| Sbjct 1574 AATTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTT 1633 Query 33340 TCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||||||| || || |||||||||||||| Sbjct 1634 ACCCGTAAGGGTCTTGACGAAAATTTGCAT 1663 >seq98588 Length=355 Score = 102 bits (112), Expect = 5e-17 Identities = 154/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| || | || || |||||||| || ||||| || || | | || | Sbjct 328 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGACCA 269 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT- 33273 || ||||||||||| ||| ||| || | ||| ||||| || | || ||||| ||||| Sbjct 268 TCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTG 209 Query 33274 --TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | | || |||||| ||| ||| || || ||||| || |||||||| Sbjct 208 TCTTGGATTTTAGC---TTTTACGTTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTA 152 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || ||||| || || ||||| || ||||| ||||| Sbjct 151 ATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq49094 Length=1117 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | |||| || |||||||| || || || || || |||||||| || ||| Sbjct 911 CCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTGAC 852 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | | || || || | ||||||||| ||| |||| | |||||| || | ||| Sbjct 851 AGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGGGA 792 Query 33263 ATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 ||||| ||||| || ||| |||| | || ||| ||| || || | || Sbjct 791 ATGCCCTCTTTATCCTGAATTTTTGCCT---TAACATTTTCAATTGTATCAGAAGCTTCC 735 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || || || || || || ||||| ||||||||||| Sbjct 734 ACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 317718373560924