Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq51813 253 2e-62 seq98588 116 3e-21 seq49094 102 7e-17 seq38040 89.7 4e-13 seq80369 86.0 5e-12 seq60889 84.2 2e-11 >seq51813 Length=3444 Score = 253 bits (280), Expect = 2e-62 Identities = 639/965 (66%), Gaps = 21/965 (2%) Strand=Plus/Plus Query 101018 TAATCGACAACGCCGTCTTCCCAAGTACCGGTCACGGGCCCGGCAGCTGTGCCTGTGAA- 101076 ||||| || || ||||||| ||||||||| | || || || | ||| |||||||||| Sbjct 378 TAATCCACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAG 437 Query 101077 --ATAGTTGTCACCGTCATAGCCTGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACG 101134 | |||||| ||| || | || ||||| |||||||| || || ||||||||||| Sbjct 438 GGAATGTTGTCTTCGTAAT--CATGA-ACGCCAGTCCAACCACGACCATACATGGCAACA 494 Query 101135 CCCACAATAATTTTGCGCGGGTCTACGCCCTGGTTCGTGAGCGATTTAACAGCGTAATCC 101194 || | | ||| || || | || ||||| | | |||| || || | || Sbjct 495 CCTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAATATTTTACTCCGAAGTCA 554 Query 101195 GTGTTGTACAGCTCGTTTGGGTTCCAACTCGGCGCGTAGAGTGTAGTTTGATAGCCCAGA 101254 | |||| || || || ||||| |||||||| | || ||||||| || ||| Sbjct 555 GATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA 614 Query 101255 TCGATGTTTGACCACGCGCCTTTGAAATCGTAGCTCATGAGAAATATTTTATCGAGGAAC 101314 | |||||||| || || ||||| || |||||||| | || || | ||| | | Sbjct 615 GTGTCATTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATATGATCCATATAA 674 Query 101315 TTTTGCGCAAGATCGTATTTTACTACAGCAATTTTGTCGTGACCCGAACTAATTGCACTT 101374 ||||| || |||| | || || ||||| || || || ||||| ||| Sbjct 675 TTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAA 734 Query 101375 GTTAATTCGTATGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCCAGCATTGCGCGCAATTC 101433 || ||||||||| | ||||| | | || || | ||| || ||||| | || ||||| Sbjct 735 GTCAATTCGTATTTCTTGCCATTCTT-AGCTGAGAGCTCATCGAGCATCTCACGTAATTC 793 Query 101434 TTTCAGTAAAATGTTGTACGTGTCAGCGTCGCGTTCTTTGTTGCCGAGTGTTGGGTTGGC 101493 ||||| ||| | || ||| | || |||| | | ||||| ||||| || Sbjct 794 TTTCATCAAACTTACATAGCAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTTAGC 850 Query 101494 GCCTTTACCACCCGGAAACTCCCAATCGATGTCTACCCCGTCAAAAAATTTCCAAACCTG 101553 ||||| ||||| ||||||||||||||||| ||||| || || || |||||||| | Sbjct 851 ACCTTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAG 910 Query 101554 CAAAAATTCTTTGACAGAATCCACAAACA-----CACGCCGTTTTATCGCGTCGTGCATA 101608 | ||| || || || || | |||||| | | | |||||| | | | Sbjct 911 AAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTATCAACT-----AAA 965 Query 101609 TAATAGAACGGGTCGGACAATGTCCAGCCGCCGATGGACGGCAAAATTTTAAGGTGTGGA 101668 | | || || |||| | ||||| || || || || || | ||| || | | || Sbjct 966 AAGAAAAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCCGGG 1025 Query 101669 TTGGCCAATTTGGCCGCCATTAGCTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCA 101728 ||| ||| | ||||| || || |||||||||||||||||||||||||| | | Sbjct 1026 CGGGCTTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTCGTTCCATGAA 1085 Query 101729 GATACACCTTTCTGCGGTTTTTGTATTGCGGCCCAAGGATCGTGGATAGCAACTTTAAAA 101788 || | ||||| || |||||||||| ||| ||||| ||||||||||| | |||||||| Sbjct 1086 GACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAG 1145 Query 101789 TCTGAACGGCCCTGGCAAGAACGTTGCAACGCTTCAAAACTACCGGGTATGGTTTTGAGG 101848 || |||||| || || ||||||| |||| ||||| || || ||| | | Sbjct 1146 TCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAG 1205 Query 101849 GCGTCGTTAAGGCCATCGCCGCCACAAATGGGTATGAACCCGTACAACAAATGTGAGAGG 101908 ||| || | ||| || ||||| |||||||| || || || || | |||||| | || Sbjct 1206 CTGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGA 1265 Query 101909 TTGGGCAGCGGCACTTTGTCCACCGGAAAGTTGCGACCATACACGCCCCATTCTACAAAA 101968 || || | || | ||||| || || || | | ||| || ||||||||||| || Sbjct 1266 TTAGGTATAGGTATACGATCCACGGGGAACTTTCTAGGATAGACACCCCATTCTACGAAG 1325 Query 101969 TACGC 101973 || || Sbjct 1326 TAGGC 1330 >seq98588 Length=355 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| || || | | ||| ||||| || || |||||||||||||| |||||||| ||| Sbjct 342 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGG 283 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| | |||||||||||| || || ||| | ||||| | ||| ||||| | Sbjct 282 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTG 223 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||| |||||||| ||||| ||| || | ||| || ||| |||||| Sbjct 222 GGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCA 163 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| |||||||| || || || | ||||| |||||||| ||||| Sbjct 162 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq49094 Length=1117 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 || |||||| || | || ||||| || || || || ||||| || || | ||| Sbjct 669 CAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATC 610 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||| | ||||| || ||| |||||||||||||||| ||| || | ||||||||||| Sbjct 609 TTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTGTC 550 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 ||||||| || || | | | | ||| || |||| ||||| ||||| || Sbjct 549 TTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATCGT 490 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 |||||| |||| || || ||||||||||||||| Sbjct 489 TTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 456 >seq38040 Length=2861 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 |||||||| | | | ||||| || || || || ||||| || || |||||||| | Sbjct 1781 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGAC 1840 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||||||||| || || ||| | || || | |||||| || ||| Sbjct 1841 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGG 1900 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||| || || ||||| ||||| | | | | || ||||| | Sbjct 1901 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 1960 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| ||||||||| || || ||||| ||||| ||||| |||||||| Sbjct 1961 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 |||||||| || | || ||||| || || || ||||||||||| |||||||| ||| Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || ||||||||||| || || ||| |||| | | |||||||| || Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||||||| |||||| || || | ||| | || || ||| | Sbjct 2585 ATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACT 2644 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||||| ||||| || || | ||||| |||||||||||||| Sbjct 2645 TCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/122 (76%), Gaps = 4/122 (3%) Strand=Plus/Plus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--A 20053 ||| || |||||||| |||||||| ||||| || || ||||| ||||| | | | Sbjct 2707 CAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG--ATAGTGTACGGCCA 2764 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 ||||||| |||||| || ||| |||| ||||||||||| || ||| | ||||||||| Sbjct 2765 TCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTG 2824 Query 20114 TC 20115 || Sbjct 2825 TC 2826 >seq80369 Length=3501 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19979 TTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 || || || |||| || ||||| | ||| |||||| ||| || || || |||||||| Sbjct 422 TTACCCCCACGTAGTCTTAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCA 363 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 | ||| ||| ||| || | ||| || || ||| | ||||||||||| ||||| Sbjct 362 GATAGCGTTCTAGCATCCTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGT 303 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | ||| || ||||| | || ||| ||| || | | | || ||| | || || Sbjct 302 GGAATGCCCTCCTTGTCTTCTATCTTTGCTTTTACATTCTCGATAGTATCACTAGACTCT 243 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| || || || || || || || ||||| ||||| || ||||| Sbjct 242 ACTTCCAATGTTATTGTCTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193 >seq60889 Length=898 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/122 (76%), Gaps = 4/122 (3%) Strand=Plus/Minus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--A 20053 ||| || |||||||| |||||||| ||||| || || ||||| ||||| | | | Sbjct 757 CAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG--ATAGTGTACGGCCA 700 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 ||||||| |||||| || ||| |||| ||||||||||| || ||| | ||||||||| Sbjct 699 TCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTG 640 Query 20114 TC 20115 || Sbjct 639 TC 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418193005879278