Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq49094 210 5e-49 seq80369 170 4e-37 seq38040 170 4e-37 seq98588 158 3e-33 seq22409 152 1e-31 seq60889 150 4e-31 seq55316 116 8e-21 >seq49094 Length=1117 Score = 210 bits (232), Expect = 5e-49 Identities = 185/231 (80%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| |||| ||||||| || || |||||||| ||||||||||| |||||| Sbjct 458 ATTCCACCTCTCAGCCGTAGTACTAAGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCA 399 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||| || | || ||||| || || |||||||||||||| || || |||||||| || Sbjct 398 GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGG 339 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||||||||| ||||| || |||||||| | ||||| || ||| Sbjct 338 GGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCC 279 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || ||||| |||||||| || || ||||| |||||||| || |||||| Sbjct 278 ACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 228 Score = 201 bits (222), Expect = 3e-46 Identities = 183/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| || | ||||||| ||| || |||||||| ||||||||||| ||||| Sbjct 914 ATTCCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCT 855 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| || || ||||||||||||||||| || || ||||| || Sbjct 854 GACAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGG 795 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||||||||| ||||| || |||||||| | ||||| || ||| Sbjct 794 GGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCC 735 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || ||||| |||||||| || || ||||| |||||||| || |||||| Sbjct 734 ACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 684 Score = 196 bits (216), Expect = 1e-44 Identities = 182/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 |||||||| || || | || || | || || || ||||| |||||||||||||| || Sbjct 686 ATTCCCCCCCTAAGGCGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCT 627 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| |||||||| |||||||| |||||||| ||||||||||| || ||| Sbjct 626 GACAGCGTACGACCATCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGA 567 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || ||||| ||||| || |||||||||| ||||| || ||| Sbjct 566 GGAATACCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 507 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | |||||| || || ||||| ||||| |||||||| || |||||| Sbjct 506 ACTTCCAATGTAATCGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 456 Score = 172 bits (190), Expect = 1e-37 Identities = 161/205 (79%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 104356 ATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTG 104415 ||| || |||||||| ||||| || ||||||||||| || || | || ||||| ||||| Sbjct 1116 ATGCAAAGTAGATTCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTTG 1057 Query 104416 TTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 |||||||| ||||| | || ||||| || ||||| || ||||| || || |||||||| Sbjct 1056 CTTTCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCTT 997 Query 104476 TGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 ||| || |||||||| | || || || ||| ||||||| |||||||| |||||||| Sbjct 996 TGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAGT 937 Query 104536 AAGTGTTTTTACAAATATCTGCATT 104560 |||||||| || || || |||||| Sbjct 936 CAGTGTTTTAACGAAAATTTGCATT 912 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || || || | || || | || || || ||||| ||||||||||||||||| Sbjct 230 ATTCCACCCCTAAGGCGTAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCT 171 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| ||||| ||||| || ||||||| || |||||||| ||| Sbjct 170 GACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGA 111 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || ||||||||||| ||||| || || | ||||| || ||| Sbjct 110 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCC 51 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||| ||||| || || || |||||||| ||||| || ||||| Sbjct 50 ACTTCCAATGTGATAGTTTTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1 >seq80369 Length=3501 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 ||||| | ||| || | || ||||| | |||| ||| ||||| ||||| || |||||| Sbjct 419 CCCCCACGTAGTCTTAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGAT 360 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || |||||| | || || ||||| || |||||||| || |||||||| ||||| || || Sbjct 359 AGCGTTCTAGCATCCTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGA 300 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || || || || || | ||||||||||||||||| || | ||||| |||| ||||| Sbjct 299 ATGCCCTCCTTGTCTTCTATCTTTGCTTTTACATTCTCGATAGTATCACTAGACTCTACT 240 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || | ||| || ||||| || || | |||||| ||||| |||||||| Sbjct 239 TCCAATGTTATTGTCTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193 >seq38040 Length=2861 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 |||||||| || | ||||||||||| |||||||| ||||||||||| || | ||| ||| Sbjct 2252 AGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGATAGGGTGCGACCATCT 2311 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | ||| || |||||||| || || | |||||||| ||||| || |||||||| || Sbjct 2312 TCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGGATACCTTCTTTGTCT 2371 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || || || || ||||||||||| | || || || || |||||||| || || ||| Sbjct 2372 TGGATTTTAGCCTTTACATTTTCAATTGTGTCAGATGGCTCCACCTCTAGAGTTATGGTC 2431 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || |||||||| ||||| Sbjct 2432 TTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2463 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | |||||||| ||| || ||||||||||| || || || ||||| Sbjct 1550 ATTCCACCGCGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCC 1609 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | || || || || || || ||||| |||||||| | |||||||| || Sbjct 1610 GACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGG 1669 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| || || ||||| ||||| |||||||| | || || ||||| Sbjct 1670 GGAATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCC 1729 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| ||| ||||| || || || ||||| |||||||| |||||||| Sbjct 1730 ACTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 1779 Score = 150 bits (166), Expect = 4e-31 Identities = 118/141 (84%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||||| ||||| |||||||| || ||||||||||| |||||||| || | || ||||| Sbjct 2710 TACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCTTC 2769 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 |||||||||||||||||||| ||||||||||| || || || || |||||||| || || Sbjct 2770 CAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTG 2829 Query 104470 AATCTTTGCTTTTACATTTTC 104490 |||||||| || |||||||| Sbjct 2830 GATCTTTGCCTTCACATTTTC 2850 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||| ||||| || ||||| || || || | |||||||| | ||| |||||| Sbjct 2495 GTGGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAATTGCTTTCCA 2554 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | | |||||||| ||||| || |||||||| || ||||| || || || Sbjct 2555 GCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTAGCCTTA 2614 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | || || || ||| || |||| ||||| || || || ||||||||| Sbjct 2615 ACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAACGTAATTGTTTTTCCTGTAAGTGTT 2674 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 2675 TTAACAAAAATTTGCAT 2691 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||||| | || | || || |||||||||||||| || ||| Sbjct 1778 ATACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCA 1837 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||| | ||| ||||| | ||| || |||||||| || || | |||||| || || Sbjct 1838 GACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGG 1897 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| |||||||| || || || || ||||| || | || || |||||| Sbjct 1898 GGGATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCT 1957 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| ||||| || || | |||||| |||||||| ||||| Sbjct 1958 ACTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 >seq98588 Length=355 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||||||||| ||||| || ||||| || ||||| | ||| ||||| | ||| || ||| Sbjct 310 GTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGACCATCTTCCAATTGCTTACCA 251 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| |||||||| || || || ||||| || || || || |||||| Sbjct 250 GCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTT 191 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| | ||||| ||||| || || || ||||| ||||| ||||| || ||| Sbjct 190 ACGTTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTT 131 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 130 TTAACAAAAATCTGCAT 114 >seq22409 Length=1756 Score = 152 bits (168), Expect = 1e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| ||||| ||||| || ||||| || |||||||| | || | || || Sbjct 1451 AAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATC 1510 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 |||||| ||||| |||||||| || | | || || || || || || ||||| ||||| Sbjct 1511 TTCTAGCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATC 1570 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||| || |||||||||||||||| ||||| | ||| ||||| || ||||| || Sbjct 1571 TTGAATTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGT 1630 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 ||||| ||||| || || || || || |||||| || Sbjct 1631 TTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 1667 >seq60889 Length=898 Score = 150 bits (166), Expect = 4e-31 Identities = 118/141 (84%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||||| ||||| |||||||| || ||||||||||| |||||||| || | || ||||| Sbjct 754 TACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCTTC 695 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 |||||||||||||||||||| ||||||||||| || || || || |||||||| || || Sbjct 694 CAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTG 635 Query 104470 AATCTTTGCTTTTACATTTTC 104490 |||||||| || |||||||| Sbjct 634 GATCTTTGCCTTCACATTTTC 614 Score = 89.7 bits (98), Expect = 1e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 104438 TGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTA 104497 |||||||| ||||| || |||||||| || || || || || ||||||||||| | || Sbjct 894 TGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTG 835 Query 104498 TCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGC 104557 || | || || |||| ||||| || || |||||||||||||| ||||| || ||| Sbjct 834 TCAGAGGCCTCAACTTCTAACGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGC 775 Query 104558 AT 104559 || Sbjct 774 AT 773 >seq55316 Length=1040 Score = 116 bits (128), Expect = 8e-21 Identities = 125/164 (76%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 268855 TCTT-GCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT 268913 |||| || || ||||| | | ||||||||| ||||| || || |||| ||| |||| Sbjct 640 TCTTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTAGTGGAGCGTTTCT 699 Query 268914 GTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAA 268973 |||||||| || | |||||||||| || || || || || || || || || |||| Sbjct 700 CACAAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGGTTTCAAATTGCAATGGAAA 759 Query 268974 ATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATA 269017 || ||||||||||||||||| | ||||||| || ||||||||| Sbjct 760 ATGTTCATTCAGAGATGTACTCTTTATTAATTGACACTTATATA 803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147376364613704