Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_005344.1
Length=39043
Score E
Sequences producing significant alignments: (Bits) Value
seq262377 113 1e-20
seq250077 86.0 2e-12
>seq262377
Length=537
Score = 113 bits (124), Expect = 1e-20
Identities = 358/540 (66%), Gaps = 14/540 (3%)
Strand=Plus/Plus
Query 7505 GCACAGCCATCACTGATGGTGCAAAAAGGCATCGCCGGGACTTACTGCAAAACGCCGTT- 7563
|| ||||| ||||||||||| || || || ||||| || || | | || || | || |
Sbjct 3 GCTCAGCCGTCACTGATGGTCCAGAAGGGGATCGCTGGAACGTTC-GCCAAGTGTCGCTA 61
Query 7564 TGCTGATTCGTATGCGTTCATCAGCAATCCGGC-AACGGGTGCGCCGTCTGTGTATATCA 7622
||| || || | || || | ||||| ||||| ||||||| |||| ||||| ||| | |
Sbjct 62 TGCAGACTCACACGCCTTTGTTAGCAACCCGGCCAACGGGT-CGCCTTCTGTTTATGTGA 120
Query 7623 TCGGCTCCGG-TCAGGTGTCACCAATCGCCAGCGCGAGCATTGAGAAAATCCTCCGCTCC 7681
| || || || | | ||| |||| || | || | || || | || |
Sbjct 121 TAAGCCAAGGCTCTGCTA-CACAAATCTCCTCGGTCAGTGTCGATAAGGTTCTGAGAAGT 179
Query 7682 TACACTGCTGATGAACTGGCTGATGGTGTG-ATGGAATCTCTGCGGTTTGATGCTCATGA 7740
|||| || ||| ||||| | |||| ||||| || | || || |||| ||| ||
Sbjct 180 TACAGCGCCACTGATTTGGCTCA-GGTGCACATGGAGTCCTTACGATTCGATGGTCACGA 238
Query 7741 GTTGCTGATTATCCACCTTCCTCGCCATGTTCTCGTGTACGACGCATCTTCAAGCGCCAA 7800
| | | || |||||||| || |||| || || ||||| || |||| ||
Sbjct 239 GCTAATCATCATCCACCTACCGAATGATGTACTTTGCTATGACGCCTCAGCAAGTCAGAA 298
Query 7801 TGGTCCGCAATGGTGTGTACTGAAAACAGGCTTGTATGACGATGTGTACCGCGCTATCGA 7860
||||||||||||| | |||||||| || | ||||| | | | || ||||||||
Sbjct 299 CGGTCCGCAATGGTCAATCCTGAAAACTGGACTCTATGATACTCCGCATCGTGCTATCGA 358
Query 7861 CTTCATTTACGAAGGAAATCAGATAACGTGCGGCGATAAGCTGGAATCGGTGACCGGGAA 7920
|||||| || || || || ||||| || ||||| || ||| | |||| ||||||||| |
Sbjct 359 CTTCATGTATGAGGGTAACCAGATTACCTGCGGAGACAAGACGCAATCTGTGACCGGGTA 418
Query 7921 ATTGCAGTTCGAT--ATCAGCAGTCAGTATGGGCTTCAACAGGAACACCTGCTGTTTACT 7978
| | | | | ||| || ||||| | | || |||||||| || | ||
Sbjct 419 TCTTAATTATGCTCACTCATCA--CAGTACGACGCAGAGCAAGAACACCTTCTCTACACG 476
Query 7979 CCACTGTTCAAAGCGGATAAC-GCCAGATGCTTCGATCTGGAGGTGGAATCATCCACTGG 8037
||||| ||||| || |||||| || ||| |||||| | || | ||| |||| || ||
Sbjct 477 CCACTTTTCAAGGCTGATAACAACCTGAT-ATTCGATTTCGAATTAGAAGCATCAACAGG 535
>seq250077
Length=544
Score = 86.0 bits (94), Expect = 2e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 8338 CAGTCGTATCTGCTTTACGTTATCGCACAGGGCACTGATGTTGGTAACGTGGCTAACAAA 8397
||| | ||||| ||||| ||| || || || || || | ||||| || ||| |||
Sbjct 442 CAGCCTTATCTACTTTATGTTGTCCAGCAAGGTACCGACTTAGGTAATGTTGCTGGTAAA 383
Query 8398 GCCAACGAGGCCGGACAGGGCGCTTATGATGCACAGGTCAGGAACGATGAGCAGGAT 8454
||||||||||| || ||||| ||||| ||||| ||||| | ||| || |||||||||
Sbjct 382 GCCAACGAGGCAGGTCAGGGTGCTTACGATGCCCAGGTGAAGAATGACGAGCAGGAT 326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124411898682780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |