Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq262377 113 1e-20 seq250077 86.0 2e-12 >seq262377 Length=537 Score = 113 bits (124), Expect = 1e-20 Identities = 358/540 (66%), Gaps = 14/540 (3%) Strand=Plus/Plus Query 7505 GCACAGCCATCACTGATGGTGCAAAAAGGCATCGCCGGGACTTACTGCAAAACGCCGTT- 7563 || ||||| ||||||||||| || || || ||||| || || | | || || | || | Sbjct 3 GCTCAGCCGTCACTGATGGTCCAGAAGGGGATCGCTGGAACGTTC-GCCAAGTGTCGCTA 61 Query 7564 TGCTGATTCGTATGCGTTCATCAGCAATCCGGC-AACGGGTGCGCCGTCTGTGTATATCA 7622 ||| || || | || || | ||||| ||||| ||||||| |||| ||||| ||| | | Sbjct 62 TGCAGACTCACACGCCTTTGTTAGCAACCCGGCCAACGGGT-CGCCTTCTGTTTATGTGA 120 Query 7623 TCGGCTCCGG-TCAGGTGTCACCAATCGCCAGCGCGAGCATTGAGAAAATCCTCCGCTCC 7681 | || || || | | ||| |||| || | || | || || | || | Sbjct 121 TAAGCCAAGGCTCTGCTA-CACAAATCTCCTCGGTCAGTGTCGATAAGGTTCTGAGAAGT 179 Query 7682 TACACTGCTGATGAACTGGCTGATGGTGTG-ATGGAATCTCTGCGGTTTGATGCTCATGA 7740 |||| || ||| ||||| | |||| ||||| || | || || |||| ||| || Sbjct 180 TACAGCGCCACTGATTTGGCTCA-GGTGCACATGGAGTCCTTACGATTCGATGGTCACGA 238 Query 7741 GTTGCTGATTATCCACCTTCCTCGCCATGTTCTCGTGTACGACGCATCTTCAAGCGCCAA 7800 | | | || |||||||| || |||| || || ||||| || |||| || Sbjct 239 GCTAATCATCATCCACCTACCGAATGATGTACTTTGCTATGACGCCTCAGCAAGTCAGAA 298 Query 7801 TGGTCCGCAATGGTGTGTACTGAAAACAGGCTTGTATGACGATGTGTACCGCGCTATCGA 7860 ||||||||||||| | |||||||| || | ||||| | | | || |||||||| Sbjct 299 CGGTCCGCAATGGTCAATCCTGAAAACTGGACTCTATGATACTCCGCATCGTGCTATCGA 358 Query 7861 CTTCATTTACGAAGGAAATCAGATAACGTGCGGCGATAAGCTGGAATCGGTGACCGGGAA 7920 |||||| || || || || ||||| || ||||| || ||| | |||| ||||||||| | Sbjct 359 CTTCATGTATGAGGGTAACCAGATTACCTGCGGAGACAAGACGCAATCTGTGACCGGGTA 418 Query 7921 ATTGCAGTTCGAT--ATCAGCAGTCAGTATGGGCTTCAACAGGAACACCTGCTGTTTACT 7978 | | | | | ||| || ||||| | | || |||||||| || | || Sbjct 419 TCTTAATTATGCTCACTCATCA--CAGTACGACGCAGAGCAAGAACACCTTCTCTACACG 476 Query 7979 CCACTGTTCAAAGCGGATAAC-GCCAGATGCTTCGATCTGGAGGTGGAATCATCCACTGG 8037 ||||| ||||| || |||||| || ||| |||||| | || | ||| |||| || || Sbjct 477 CCACTTTTCAAGGCTGATAACAACCTGAT-ATTCGATTTCGAATTAGAAGCATCAACAGG 535 >seq250077 Length=544 Score = 86.0 bits (94), Expect = 2e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 8338 CAGTCGTATCTGCTTTACGTTATCGCACAGGGCACTGATGTTGGTAACGTGGCTAACAAA 8397 ||| | ||||| ||||| ||| || || || || || | ||||| || ||| ||| Sbjct 442 CAGCCTTATCTACTTTATGTTGTCCAGCAAGGTACCGACTTAGGTAATGTTGCTGGTAAA 383 Query 8398 GCCAACGAGGCCGGACAGGGCGCTTATGATGCACAGGTCAGGAACGATGAGCAGGAT 8454 ||||||||||| || ||||| ||||| ||||| ||||| | ||| || ||||||||| Sbjct 382 GCCAACGAGGCAGGTCAGGGTGCTTACGATGCCCAGGTGAAGAATGACGAGCAGGAT 326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124411898682780