Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq51813 199 3e-46 seq22409 93.3 4e-14 >seq51813 Length=3444 Score = 199 bits (220), Expect = 3e-46 Identities = 643/983 (65%), Gaps = 35/983 (4%) Strand=Plus/Minus Query 30220 GTGGTGGCCGGTTACTTTGTAGAGTGGGGTGTTTACGACAGACAATATCCAGCAGA-CTT 30278 || |||| || ||||| ||||| |||||||| || ||| | | || | || | | Sbjct 1339 GTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTATCCTAGAAAGTTCCCCGTGGATCGT 1280 Query 30279 AGTTCCCGTCCCCAACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGA 30338 | | || | || || ||||| ||| | | ||||||||| | || | ||||| || || Sbjct 1279 A-TACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGA 1221 Query 30339 TGGTATAAACGATAGCTTAAAGCAAGTGCCGGGTTCGTTTGAGGCTTTACAAAAATCTTG 30398 || ||||| || |||||||| | | || || | || | ||| || || Sbjct 1220 CGGCATAAATGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTG 1161 Query 30399 CGCGGGTCGAGAGGATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACC 30458 || || ||||| |||||||| | || |||||| |||| || | |||||||| Sbjct 1160 TAGCGGCCGTGAGGACTTTAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACC 1101 Query 30459 ACAAAAAGGAGTGGGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGC 30518 |||||||||| || | ||| |||| || || ||||| || || |||||| | ||| | Sbjct 1100 ACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTCGGCCAATTAATGTC 1041 Query 30519 GATTAAAAGACACAATCCCGACC-----TTACGATTTTACCGTCTATTGGCGGGTGGACA 30573 | ||||| ||| |||| || | | |||| | || |||||||| |||||||| Sbjct 1040 -ACTAAAA----CAAGCCCGCCCGGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACG 986 Query 30574 CTTAGCGACCCTTTCTTTAAATTGAGTTCTGCCGA-AAATC-----GCGC-CGTTTTCGT 30626 ||| ||| ||||| ||| || |||| || ||||| | | || ||| || Sbjct 985 CTTGCCGATCCTTT-TTTCTTTTTAGTT-----GATAAATCTAAGAGAACACGATTT-GT 933 Query 30627 TGAGTCCGCACGAGAGTATTTGCGCACATGGAAATTTTTTGACGGACTAGACATCGACTG 30686 |||| | | |||| | | | ||||||||||| || || || |||| ||||| || Sbjct 932 GCAGTCAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTG 873 Query 30687 GGAGTTTCCGGGCGGTAAAGGTGCTAATCCCGAATTAGGAGATCCAGAAAAGGATGGAGT 30746 ||||||||| || || ||||||||||| || || | || |||||| ||||| | Sbjct 872 GGAGTTTCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGA 816 Query 30747 AACATATGTGCAGTTATTGAAAGAGCTCAGAGAAATGCTAAACGATCTTTC--TAAAGAA 30804 ||||| || ||||||| | | || ||||| | || || || ||||| Sbjct 815 TTGCTATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCTAAGAA 756 Query 30805 ACAGGGAAAAAATACCAGCTCACCTCGGCGATTAGCGCGGGGTACGATAAAATCTCTATA 30864 || || |||||| | | || || || |||||| | || | ||||||||| | Sbjct 755 --TGGCAAGAAATACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTT 698 Query 30865 GTTAATTATGAAAATGCGCAAGAGTATCTTGATCACATTTTTGTTATGACGTACGATTTT 30924 ||| | || | || || ||| | ||| | ||||| ||||| | |||| || || || Sbjct 697 GTTGACTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGCTATGACTTC 638 Query 30925 AAAGGCGCTTGGTCTAA-CACGGACTTGGGATATCACACTACACTTTATTCACCCTCTTG 30983 || || || ||||| || || ||| ||| |||| || || | || | || | || Sbjct 637 AAGGGAGCCTGGTCAAATGACACTCTT-GGACATCAAACACCATTGTACGCGCCTGCATG 579 Query 30984 GAACGCTGAAGAAAAATATACTGCCGAGTACGCGACAAAGGAGTTGTTAAAACAAAACGT 31043 ||| | | |||| || || | || | || ||| | ||||| ||| || Sbjct 578 GAATCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATATTTGTTGGCACAGGGAGT 519 Query 31044 CAATAGTAAGAAAATAGTGCTAGCTGTTGCAATGTACGGAAGAGGGTGGACGGGTGTGCA 31103 ||| |||||| || || ||| |||||| ||||| || | || ||||| || || || Sbjct 518 GAATCCTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCA 459 Query 31104 TGACATAAAAAACAACAATCCCTTTACGGGTGTAGCTCAGGGGCCGATTAAAGGAACTTG 31163 ||| || |||||| |||||| || || ||| || || | ||||| ||||| Sbjct 458 TGATTACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTG 399 Query 31164 GGAAAGTGGAGTTGTAGATTACA 31186 | || ||||| || ||||||| Sbjct 398 GCAAGACGGAGTGGTGGATTACA 376 >seq22409 Length=1756 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| | ||| | |||| ||||||||||||||||| |||| |||| || | || || Sbjct 1454 CACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 1513 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||| ||||| | | || ||||| ||||| || || | || |||||| || Sbjct 1514 TAGCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 1573 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||||||| || | | |||| ||||| | | ||| ||||| || |||||||| Sbjct 1574 AATTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTT 1633 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 ||| || || || || || ||||| ||||| ||| Sbjct 1634 ACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 1667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419851476780638