Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_005841.1
Length=41391
Score E
Sequences producing significant alignments: (Bits) Value
seq271029 455 9e-124
seq249728 217 4e-52
seq177630 152 1e-32
seq262377 120 8e-23
seq272271 82.4 2e-11
>seq271029
Length=527
Score = 455 bits (504), Expect = 9e-124
Identities = 426/544 (78%), Gaps = 20/544 (4%)
Strand=Plus/Plus
Query 25548 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 25607
|||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | |
Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60
Query 25608 AGAATCCCAGTAAGTCGCAGAAAGTGGTCAACATGACCATCTATGATGCTGAGCACTACA 25667
|||| || || ||| |||||| |||||||| |||||||||||||| || || |||||||
Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120
Query 25668 CCGACGAGCAGAAAGAGCAAATCATAGCATCCTATCCTGAGCATGAGAGAGAGGCACGTG 25727
||||||||||||||||||||||||| || || ||||||||||||||| | || || ||||
Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180
Query 25728 CTCGTGGTATTCCTACGATGGGTAGCGGTCGAATATTCCAGATACCGGAAGAGACGATTA 25787
| || ||||| || || |||||||||||| | || | ||| ||||| ||||| || || |
Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240
Query 25788 AGTGCCAGCCGTTTGAGTGTCCCGATCACTTCTATGTTATCGACGCTCAGGACTTCGGCT 25847
|||||||||||||||| ||||||||||||||||| |||||||||| || ||||| ||||
Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300
Query 25848 GGAACCACCCGCAAGCTCACATTCAGCTTTGGTGGGACAAAGACGCAGATGTTTTCTATC 25907
|||| ||||||||| |||| |||| ||||| || |||||||
Sbjct 301 GGAATCACCCGCAA--TCAC------------NNGGACGAAGAC------GTCTTCTATC 340
Query 25908 TGGCGCGTGTATGGAAGAAATCAGAGAACACTGCCGTTCAGGCATGGGGTGCTGTTAAGT 25967
| || || || ||||||||||| ||||||||||| || ||||| ||||| ||| |||||
Sbjct 341 TTGCTCGAGTGTGGAAGAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTAAGT 400
Query 25968 CGTGGGCTAACAAAATACCTGTCGCGTGGCCTCATGACGGTCACCAACACGAAAAGGGCG 26027
| ||| | ||||| |||||||| || |||||||| || || ||||||||||| || ||||
Sbjct 401 CATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAGGCG 460
Query 26028 GTGGTGAGCAACTTAAAACCCAATATGCGGATGCCGGGTTCTCTATGCTTCCCGATCACG 26087
| |||||||| || || | ||||| || || || || ||| ||| | || || || |
Sbjct 461 GCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGCATG 520
Query 26088 CAAC 26091
| ||
Sbjct 521 CCAC 524
>seq249728
Length=458
Score = 217 bits (240), Expect = 4e-52
Identities = 286/395 (72%), Gaps = 25/395 (6%)
Strand=Plus/Minus
Query 26986 CCCAACGATTGGGTATTTCCATGGCTGACGCAGGA-CACAATTCAGATCGCTGAGTTTTA 27044
||||||||||||||||| || |||||||| ||| | | | | | |||||||||| |||
Sbjct 372 CCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGCTGAGTATTA 314
Query 27045 CGAAGTGGTCGAGAAGAAAGAGACGGCGTTTATCTACCAAGACCCGGTTACGGGTGAGCC 27104
|||||| | |||||||||||| || | |||||| | |||||| | || ||||||||
Sbjct 313 CGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAACCGGTGAGCC 254
Query 27105 GGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATCGACGACCTGGCTGATAGTGGATT 27164
|| |||||||| |||||| || | ||||| |||| |
Sbjct 253 AGTTAGCTACTTCAAGCGCATGCTT------------GCCGACC---------GTGGCAT 215
Query 27165 TATCAAAATTGCAGAGCGCCAGATTAAGCGTCGCCGGGTATACAAATCTATTATCACCTG 27224
| || |||| ||| ||||||| || ||| |||| || ||| | ||| |||| |
Sbjct 214 GAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGATTCTCACATC 155
Query 27225 CACCGCAGTACTGAAAGATAAGCA-ACTCATTGCTGGAGAACATATCCCCATTGTTCCGG 27283
|||||||| ||||||| ||| | | || || || || ||| | || ||||| || |
Sbjct 154 TTCCGCAGTATTGAAAGACC-GCACATTGATAGCCGGTGAGCATCTGCCGATTGTGCCAG 96
Query 27284 TATTCGGAGAGTGGGGCTTCGTTGAAGATAAAGAAGTGTATGAGGGGGTCGTCCGCCTGA 27343
| ||||| |||||||| ||||| || ||||||||||| |||||||| |||| | ||||
Sbjct 95 TGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCGTTAGGCTGA 36
Query 27344 CAAAAGACGGTCAGCGTCTGCGCAACATGATTATG 27378
| |||||||| ||||| ||||||||||||||||||
Sbjct 35 CGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1
>seq177630
Length=801
Score = 152 bits (168), Expect = 1e-32
Identities = 205/284 (72%), Gaps = 1/284 (0%)
Strand=Plus/Plus
Query 31335 CAAAGCCTAAGGCGGAAAGCGATGCAGATAAAGACTAAAGGCGATCTGGTCAGGGCGGCG 31394
||||||| |||| || | |||||| || |||| || || || | || | |||||
Sbjct 508 CAAAGCC-AAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCGGCA 566
Query 31395 CTGCGTAAGCTTGGTGTAGCATCAGATGCAACTCTCACTGATGTTGAGCCACAGTCTATG 31454
||||| ||||| ||| | || || || || || || |||||||| |||||||| || |||
Sbjct 567 CTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCAATG 626
Query 31455 CAGGATGCCGTAGATGACCTTGAAGCGATGATGGCTGAGTGGTATCAGGACGGGAAAGGC 31514
|||| | ||| | ||||| ||| |||||||||||| |||||||||||||| |||
Sbjct 627 GAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGAGGG 686
Query 31515 ATTGTTACCGGGTATGTATTCTCAGATGATGATAACCCGCCATCCGAAGGTGACGACCAC 31574
||| | || || || | || | |||| || | || || | |||||||||||||||
Sbjct 687 ATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGACCAC 746
Query 31575 GGTCTTCGCTCAAGCGCAATCAGCGCAGTATTCCACAATCTGGC 31618
| || || ||| | || ||||||||| |||| || || ||
Sbjct 747 TCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGC 790
Score = 150 bits (166), Expect = 5e-32
Identities = 251/367 (68%), Gaps = 18/367 (5%)
Strand=Plus/Plus
Query 30442 CCTGAGCAACGCGCCTACGCTAACGTTAACACCTCACTGGCTGATGCAATGGCGGTGAAC 30501
|| ||| ||||| | || || ||||| ||||| | || |||||| | ||| | |||
Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60
Query 30502 ATCCTGAACGTT--AAGGATGCCCGTACCAACGTGTTCTGGGCTGATGACGCCATCCGTA 30559
||| ||||||| || | || || ||||| |||||||| ||||| | |||||||
Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118
Query 30560 TTGTGTCTCAGCCGATTCCTGCTAACCACGAATTGTTTGCAGGTATGAAAACTACCTCAT 30619
| ||||||||||| ||||| || ||| || ||||||| || |||||||| || ||
Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGACTTCGN 178
Query 30620 TCAGCATCCCGGATGTCGGCCTTAACGGTATCTTCGCTACGCAGGGTGATATTTCCACCC 30679
|| | || || ||||| || || | |||
Sbjct 179 NNNNNNNNNNNNNNNNNNN-----------TCATGGCGACTCAGGGCGACATCGCAACCT 227
Query 30680 TGTCCGGCCTGTGCCGTATTGCGCTGTGGTACGGCGTAAACGCGACACGACCGGAAGCAA 30739
|| |||| ||||||||||| |||||||| ||||| ||||| || || || |||||||
Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287
Query 30740 TCGGTGTTGGCCTGCCTGGTCAGACTGCGTAACTAACAGGGGCTTCGGCCCCTTTCTTAT 30799
|||| || ||||| ||||||| || || ||| | | |||||||||||||||| || |
Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAA-TCAATGGGGCTTCGGCCCCTT--TTCT 344
Query 30800 TTGAGGT 30806
|||||||
Sbjct 345 TTGAGGT 351
>seq262377
Length=537
Score = 120 bits (132), Expect = 8e-23
Identities = 268/398 (67%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 32485 GCGCAGCCATCGTTAATGGTACAGAAGGGGATTGCCGGAACATACTGTAAAA--CGCCAT 32542
|| ||||| || | ||||| ||||||||||| || ||||| | | || ||| ||
Sbjct 3 GCTCAGCCGTCACTGATGGTCCAGAAGGGGATCGCTGGAACGTTCGCCAAGTGTCGCTAT 62
Query 32543 TCGCTGATTCATATGCATTCATCAGTCACCCGGCTACTGGCGCACCTTCCGTCTACATCA 32602
|| || ||| | || || | || ||||||| | || | ||||| || || | |
Sbjct 63 --GCAGACTCACACGCCTTTGTTAGCAACCCGGCCAACGGGTCGCCTTCTGTTTATGTGA 120
Query 32603 TCGGGTCAGGGCAGGCTTCACCAATTGCGACGGCCAGTATTGAGAAGATTATCCGCTCAT 32662
| | ||| ||| ||| ||| | ||| |||| | || ||| || | | |
Sbjct 121 TAAGCCAAGGCTCTGCTACACAAATCTCCTCGGTCAGTGTCGATAAGGTTCTGAGAAGTT 180
Query 32663 ACACAGCTGAAGAACTGGCGACTGGTGTA-ATGGAGACTTTGCGCTTCGATTCTCATGAG 32721
||| || || |||| | |||| | |||||| | || || |||||| ||| |||
Sbjct 181 ACAGCGCCACTGATTTGGCT-CAGGTGCACATGGAGTCCTTACGATTCGATGGTCACGAG 239
Query 32722 CTTCTGATTATTCATCTCCCTCGTCATGTTCTGGTTTACGACGCATCGTCAAGTCAGAAC 32781
|| | || || || || || | |||| || || ||||| || |||||||||||
Sbjct 240 CTAATCATCATCCACCTACCGAATGATGTACTTTGCTATGACGCCTCAGCAAGTCAGAAC 299
Query 32782 GGACCGCAATGGTGTGTGCTGAAAACAGGGCTTTACGATGATGTATATCGTGCTGTCGAC 32841
|| |||||||||| | |||||||| || || || ||| | |||||||| |||||
Sbjct 300 GGTCCGCAATGGTCAATCCTGAAAACTGGACTCTATGATACTCCGCATCGTGCTATCGAC 359
Query 32842 TTCATGTATGAAGGCAACCAGATAACGTGCGGCGATAA 32879
||||||||||| || |||||||| || ||||| || ||
Sbjct 360 TTCATGTATGAGGGTAACCAGATTACCTGCGGAGACAA 397
>seq272271
Length=345
Score = 82.4 bits (90), Expect = 2e-11
Identities = 167/254 (66%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 28028 TGCTGTTGCTTCAGTACTTCACACTGCTTGATGGCAAAGGCGTTGAGATGATGCGCGATT 28087
||||||| ||||||||| | || | || || || |||||| ||||||| | |||||||
Sbjct 17 TGCTGTTACTTCAGTACCTGACGTTACTCGACGGTAAAGGCATTGAGATTACTCGCGATT 76
Query 28088 ATGCCAATAAGCAGCTTATTCAGATGGGCGTTAAGAAGCCAGAAACGCCTGAAGAGCAGC 28147
| || || |||||||| || | ||| | ||| |||| || || | || |||||||
Sbjct 77 ACGCTAACAAGCAGCTAATCGTGCAGGGACTCAAGCAGCCTGAGACAGCCGAGGAGCAGC 136
Query 28148 AATGGTTAGTAGAGGCGCAACAAGC--CAAACAAGGTCAACAAGACCCGGCAATGGTTCA 28205
| ||| | |||||| || ||||| ||||
Sbjct 137 AGTGGCTGCAAGAGGCTCAGCAAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCA 196
Query 28206 GGCTCAGGGCGTACTCCTGCAGGGGCAGGCTGAACTGGCTAAAGCTCAGAACC-AGACGC 28264
|||||| ||||| | ||||| || ||||| || || ||||||||||||| | | ||
Sbjct 197 GGCTCAAGGCGTGTTACTGCAAGGTCAGGCAGATATGCAGAAAGCTCAGAACCAACAGGC 256
Query 28265 TGTCCCTGCAAATC 28278
|| ||||||||||
Sbjct 257 TG-ACCTGCAAATC 269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 131901172829868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |