Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1786 93.3 2e-14 seq49054 84.2 1e-11 >seq1786 Length=1317 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/75 (87%), Gaps = 5/75 (7%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 180 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA- 238 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||| Sbjct 239 ----CTAATGGGCCG 249 >seq49054 Length=233 Score = 84.2 bits (92), Expect = 1e-11 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 11482 ACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 233 ACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 186 Lambda K H 0.640 0.410 0.923 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260622323414488