Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq49094 147 2e-30 seq38040 127 2e-24 seq60889 98.7 9e-16 seq22409 96.9 3e-15 >seq49094 Length=1117 Score = 147 bits (162), Expect = 2e-30 Identities = 179/242 (74%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| || || | || | ||||||||||||||| |||||||| || | Sbjct 240 AAAAATTTGCATTCCACCCCTAAGGCGTAGCACCAAGTGCAAAGTCGATTCCTTCTGAAT 181 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||||| || | | ||||| | ||| ||||| || |||||| | || ||||||||| Sbjct 180 ATTATAGTC--TGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATTAATCTT 123 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||||||||| ||||| ||||| | ||| |||||||| ||| ||| || Sbjct 122 TGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTCTCGATTGTA 63 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| || || || | ||||| ||||| || || || ||||| ||||| || ||| Sbjct 62 TCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCGGTCAGTGTTTTAACAAAAATTTGC 3 Query 95006 AT 95007 || Sbjct 2 AT 1 Score = 134 bits (148), Expect = 1e-26 Identities = 176/242 (73%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| || || | |||| ||||||||||||||| |||||||| || | Sbjct 696 AAAAATTTGCATTCCCCCCCTAAGGCGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAAT 637 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 |||||||| | | || || || ||| || ||||||||||| |||| || | || Sbjct 636 ATTATAATC--TGACAGCGTACGACCATCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTC 579 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || || || |||||||||||||||||||| | |||||||||||| || | | || Sbjct 578 TGTTGGTCGGGAGGAATACCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTA 519 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| || || || | || || ||||| ||||| || || || ||||| || ||| Sbjct 518 TCAGAAGCTTCCACTTCCAATGTAATCGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGC 459 Query 95006 AT 95007 || Sbjct 458 AT 457 Score = 118 bits (130), Expect = 9e-22 Identities = 172/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || ||| ||||||| |||| || || ||||| ||||||||||| || | Sbjct 923 AAAATTTGCATTCCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATA 864 Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 || || || | | ||||| | ||| || ||||| ||||| |||| |||| ||||| Sbjct 863 TTGTAGTC--TGACAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTT 806 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 |||||||||| ||||| || ||||| || | |||||||||||| || | | || | Sbjct 805 GCTGATCTGGGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTAT 746 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 ||| || || || | ||||| || || || || || || || ||||| || |||| Sbjct 745 CAGAAGCTTCCACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCA 686 Query 95007 T 95007 | Sbjct 685 T 685 Score = 116 bits (128), Expect = 3e-21 Identities = 172/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| ||||||| || | || |||||||||||||||||||| || | Sbjct 468 AAAAATTTGCATTCCACCTCTCAGCCGTAGTACTAAGTGCAAAGTAGATTCCTTCTGAAT 409 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || || || ||||||| | ||| || ||||| ||||| |||| || | |||| Sbjct 408 ATTGTAGTCAG--ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTT 351 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||| ||||| || ||||| || | |||||||||||| || | | || Sbjct 350 TGTTGATCTGGGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTA 291 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| || || || | ||||| || || || || || || || ||||| || ||| Sbjct 290 TCAGAAGCTTCCACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGC 231 Query 95006 AT 95007 || Sbjct 230 AT 229 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGT 94864 ||||||||||||||||| || | |||||| || || ||| ||| ||||| || Sbjct 1115 TGCAAAGTAGATTCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTTGC 1056 Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 ||||| | || || |||||||| || |||||||| || ||||| ||||| | ||| ||| Sbjct 1055 TTTCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTT 996 Query 94925 GCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTA 94984 ||||| || ||| ||||||| || || || | || || ||||| ||||| Sbjct 995 GCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAGTC 936 Query 94985 AGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || || ||||| Sbjct 935 AGTGTTTTAACGAAAATTTGCAT 913 >seq38040 Length=2861 Score = 127 bits (140), Expect = 2e-24 Identities = 173/240 (72%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 94769 AAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||||| ||| |||| ||||| ||| | || ||||| ||||| | Sbjct 2452 AAATATTTGCATACCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAAT 2511 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || ||| | ||| | || |||| || ||||| |||| || || | ||| Sbjct 2512 GTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTG 2571 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||||||||||| ||||||||||| | |||||| ||||| || | | ||||| Sbjct 2572 TTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTC 2631 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | ||| || |||||||| ||||| ||||| ||||| || ||||| Sbjct 2632 AGAAGCTTCAACTTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 || || |||||||||||||| ||||| | ||| || || || |||| | ||||||| Sbjct 1571 ACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCC 1630 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || | || |||| | ||| |||||||| |||||||| |||||||| | Sbjct 1631 AGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGG 1690 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || || || || | | |||||| | | | || || || | ||||| ||||| Sbjct 1691 ATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTC 1750 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || |||||||||||||| Sbjct 1751 CCTGTGAGTGTCTTTACAAAGATCTGCAT 1779 Score = 104 bits (114), Expect = 2e-17 Identities = 170/242 (70%), Gaps = 5/242 (2%) Strand=Plus/Plus Query 94769 AAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||||| ||| |||| || | ||| | |||||||| ||||| | Sbjct 2224 AAATATTTGCATACCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAAT 2283 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || || || |||| || || ||| |||| || || || ||||||| | | | Sbjct 2284 ATTGTAGTCAG--ATAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGT 2341 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || ||||||||||| |||||||||||||| | ||||| ||||| || | | ||| Sbjct 2342 TGTTGATCTGGAGGGATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTG 2401 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | || || || | || ||||| ||||| || || || || ||||| || ||| Sbjct 2402 TCAGATGGCTCCACCTCTAGAGTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGC 2461 Query 95006 AT 95007 || Sbjct 2462 AT 2463 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/142 (76%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 ||||| || || || | ||||||||||||||| | |||||||| ||||||| | Sbjct 2705 CGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG--ATAGTGTACGGC 2762 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| ||||| |||||||| |||| || | || || || ||||| ||||||||||||| Sbjct 2763 CATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTT 2822 Query 94911 TGTCATAAATTTTTGCCTTGAC 94932 |||| | || |||||||| || Sbjct 2823 TGTCTTGGATCTTTGCCTTCAC 2844 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| ||| || ||| ||||||| | | ||| ||||||||||||||||| ||||| Sbjct 2080 ATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGAATACCCTCTTT 2139 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||| || ||||| ||| | | || |||| | || || || | || || Sbjct 2140 ATCTTGAATCTTAGCCTTTACGTTTTCAATGGTATCAGATGGCTCCACCTCTAGAGTTAT 2199 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || || || ||||| || ||||| Sbjct 2200 AGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2235 >seq60889 Length=898 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/142 (76%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 ||||| || || || | ||||||||||||||| | |||||||| ||||||| | Sbjct 759 CGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG--ATAGTGTACGGC 702 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| ||||| |||||||| |||| || | || || || ||||| ||||||||||||| Sbjct 701 CATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTT 642 Query 94911 TGTCATAAATTTTTGCCTTGAC 94932 |||| | || |||||||| || Sbjct 641 TGTCTTGGATCTTTGCCTTCAC 620 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 94885 TTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGT 94944 ||| |||||||||||||| ||||||||||| | ||||| ||||| || | | || Sbjct 895 TTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGT 836 Query 94945 GTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTG 95004 ||||| | || || || | ||| || |||||||||||||| ||||| ||||| || || Sbjct 835 GTCAGAGGCCTCAACTTCTAACGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTG 776 Query 95005 CAT 95007 ||| Sbjct 775 CAT 773 >seq22409 Length=1756 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| ||||| || ||||||||||| | ||| || || || || ||| || | Sbjct 1456 CAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTA 1515 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 ||||||| || ||||||| || | |||||| ||||| ||||||||||| || || | || Sbjct 1516 GCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAA 1575 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 |||| || || || | | ||| |||| | || || || | || |||||||| | Sbjct 1576 TTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTAC 1635 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || || || || || ||||| Sbjct 1636 CCGTAAGGGTCTTGACGAAAATTTGCAT 1663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446763434797680