Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq7383 131 3e-26 >seq7383 Length=6892 Score = 131 bits (144), Expect = 3e-26 Identities = 349/524 (67%), Gaps = 22/524 (4%) Strand=Plus/Plus Query 4474 AAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTA-GGTTT--- 4529 ||||| ||||||||||| || |||| |||| | |||||| ||| || ||||| Sbjct 2309 AAAAAAAATTATGTTATACATTATAGAAATCTTTTGCAATGTG-AGAAATATGGTTTGCG 2367 Query 4530 AGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATA 4589 ||| | | ||| | || ||| || ||||| ||||| | ||||| ||| ||| Sbjct 2368 AGTAC---AAAAAGTTCATAGAGTATTAAAATTCAAGCAAAAACCTTGGCTAAAAAAATA 2424 Query 4590 TATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTA 4649 ||| || ||| ||| || |||| |||| | || || |||||| | ||||| Sbjct 2425 TATTGAATTAAACACCCAATTACGAACTTTAGCAACATCCGACTTTGAAAAAGATTTTTA 2484 Query 4650 TAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAA-AG 4708 ||| | ||||||||| | || ||||||||||| ||||| ||| | |||||| | | | Sbjct 2485 TAAGCTGATGAATAATTCTGTATTTGGAAAGACAATGGAAAATAT-CGAAAAAAGAGTAA 2543 Query 4709 ATATATATTTAAGAACAAAGTGGCAAAGTCA-------ATACAATGTAT-CGGATTTAGT 4760 | || | ||| |||| | ||| ||| ||| || || || | | || | Sbjct 2544 ACGTAAAATTATTAACACACTGGAAAAATCATGGAAAAATCGAAGGTGTTCAGAGTCTCA 2603 Query 4761 ATG-TAGACCAAACTTCCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTGAAC 4819 || | | || | |||||||| ||| | |||||| ||| || |||| ||| ||| Sbjct 2604 TTGCTCGCCCCGAATTCCACAGTCTTTCTATTTTTTCTGAAAATTTGGTCGCAGTCCAAC 2663 Query 4820 TTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAGATT 4879 || ||| ||| | | | | || ||||| || ||| |||| ||||| |||||||| Sbjct 2664 TTCGCAAAACTAAATTGTTTTATAATAAGCCCATATATTTAGGTTTTAGCATATTAGAGA 2723 Query 4880 TATCTAAAATTTATATTTATGACTTTCATTACAATTATGTTATGCAAAATTATGTAAATA 4939 |||| || | || || ||||||||||| || | || ||| ||||| | | | | Sbjct 2724 TATCCAAGACTTTAATGTATGACTTTCACTATCAGTA---CATGAAAAATAAATTTACGA 2780 Query 4940 CCTCAAAATTATTGTACACTGACACAGATAGTCTAATTTACCAA 4983 | |||||| || || ||||| || |||||||| || || ||| Sbjct 2781 ACATAAAATTGTTATATACTGATACTGATAGTCTGATATATCAA 2824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97657200409452