Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq3120 104 2e-17
seq210326 102 9e-17
>seq3120
Length=2654
Score = 104 bits (114), Expect = 2e-17
Identities = 219/323 (68%), Gaps = 8/323 (2%)
Strand=Plus/Minus
Query 131860 TCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAAT 131919
|| ||||||||| || ||| ||||| ||||| | ||| |||| | |||| || ||
Sbjct 563 TCTTATGACTCCAGTATTACCAATGTTAGCTGAAGCTTGCAAATCAGTTGAAATGGCTAT 504
Query 131920 AGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAAT 131979
| |||| | | |||| |||| ||| ||| ||||||||||||| || || || ||| |
Sbjct 503 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 444
Query 131980 TCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCA 132039
|||||||| | |||| | ||| |||||| | |||||||| || | ||||
Sbjct 443 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCGGTAATGGCTCA 384
Query 132040 TAAAATTGATGGATTTGATAAACTGTTGA-CTGATGCATTTCCCACAGCAAAAAACTTCA 132098
||| || | |||| | | | | || | || | |||||||| | || | | || |
Sbjct 383 CAAAGTT-AGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGCTGATTTGA 325
Query 132099 TTTTAGATGCGGAATTAATAATGATAGATACAAAATC---AAATTCATTTTTACCATTTG 132155
|||| ||||| ||| || | ||| | ||| || | ||| || || || || |
Sbjct 324 TTTTGGATGCTGAAGTACTTATGGTTGATGTTAATACTGGAAAACCA---TTGCCTTTCG 268
Query 132156 GTTCATTAGGTATACATAAAAAA 132178
||||||||||||| || ||| ||
Sbjct 267 GTTCATTAGGTATTCACAAACAA 245
>seq210326
Length=301
Score = 102 bits (112), Expect = 9e-17
Identities = 120/156 (77%), Gaps = 5/156 (3%)
Strand=Plus/Plus
Query 21477 ATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAAC 21536
|| |||||| || | || |||| |||||||| || | |||||| || ||||| |
Sbjct 9 ATTCAAAATTACTAATCATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATC 67
Query 21537 CGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAA 21595
||||||| ||||||| ||||| |||||||||||||| ||||| ||| ||||| || ||
Sbjct 68 CGGGCATCAATCCTCGTTTTTTCAACCAAAATATTGAAGCAAA-GCTGCCTGAGAAAAAT 126
Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAAT-CGTTC 21630
|| ||||||| || ||||| || | |||| |||||
Sbjct 127 ATTTCCTCAACTGCCGCAAAAGCGA-TAATACGTTC 161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530088095371120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |