Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq3120 104 2e-17 seq210326 102 9e-17 >seq3120 Length=2654 Score = 104 bits (114), Expect = 2e-17 Identities = 219/323 (68%), Gaps = 8/323 (2%) Strand=Plus/Minus Query 131860 TCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAAT 131919 || ||||||||| || ||| ||||| ||||| | ||| |||| | |||| || || Sbjct 563 TCTTATGACTCCAGTATTACCAATGTTAGCTGAAGCTTGCAAATCAGTTGAAATGGCTAT 504 Query 131920 AGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAAT 131979 | |||| | | |||| |||| ||| ||| ||||||||||||| || || || ||| | Sbjct 503 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 444 Query 131980 TCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCA 132039 |||||||| | |||| | ||| |||||| | |||||||| || | |||| Sbjct 443 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCGGTAATGGCTCA 384 Query 132040 TAAAATTGATGGATTTGATAAACTGTTGA-CTGATGCATTTCCCACAGCAAAAAACTTCA 132098 ||| || | |||| | | | | || | || | |||||||| | || | | || | Sbjct 383 CAAAGTT-AGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGCTGATTTGA 325 Query 132099 TTTTAGATGCGGAATTAATAATGATAGATACAAAATC---AAATTCATTTTTACCATTTG 132155 |||| ||||| ||| || | ||| | ||| || | ||| || || || || | Sbjct 324 TTTTGGATGCTGAAGTACTTATGGTTGATGTTAATACTGGAAAACCA---TTGCCTTTCG 268 Query 132156 GTTCATTAGGTATACATAAAAAA 132178 ||||||||||||| || ||| || Sbjct 267 GTTCATTAGGTATTCACAAACAA 245 >seq210326 Length=301 Score = 102 bits (112), Expect = 9e-17 Identities = 120/156 (77%), Gaps = 5/156 (3%) Strand=Plus/Plus Query 21477 ATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAAC 21536 || |||||| || | || |||| |||||||| || | |||||| || ||||| | Sbjct 9 ATTCAAAATTACTAATCATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATC 67 Query 21537 CGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAA 21595 ||||||| ||||||| ||||| |||||||||||||| ||||| ||| ||||| || || Sbjct 68 CGGGCATCAATCCTCGTTTTTTCAACCAAAATATTGAAGCAAA-GCTGCCTGAGAAAAAT 126 Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAAT-CGTTC 21630 || ||||||| || ||||| || | |||| ||||| Sbjct 127 ATTTCCTCAACTGCCGCAAAAGCGA-TAATACGTTC 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530088095371120