Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq59246 322 6e-83
seq157294 210 3e-49
seq10486 206 3e-48
seq55316 95.1 2e-14
seq229742 91.5 2e-13
>seq59246
Length=1357
Score = 322 bits (356), Expect = 6e-83
Identities = 699/1037 (67%), Gaps = 18/1037 (2%)
Strand=Plus/Plus
Query 62724 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62783
|| |||||||||||||||||||| | || ||| |||| || ||| ||||| || | |
Sbjct 92 CCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACA 151
Query 62784 GGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACA 62840
|||||| | |||| ||| || | ||| || | |||| | ||||| ||| |
Sbjct 152 GGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAAT--CTTAGTGGTT- 208
Query 62841 TCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTACAAACATGTTCAAGGCAACAGAT 62900
|| || | ||| ||||| |||| | || | ||||||||||| | || | ||
Sbjct 209 TCTTTTAATTTTTTAAAATGAAATTGATTATTTTCAACAAACATGTTAAGTGCTATGGAA 268
Query 62901 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 62960
|| || || || || || || ||||| | | ||||| | | |||||||||||||
Sbjct 269 GCAAGGTTGCACACTGCCACTTCATTTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGA 328
Query 62961 TTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 63020
|| ||||| || ||||| || | ||||| |||||||||||| |||| || |||||||||
Sbjct 329 TTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCCTGTTGCAAGCATCCTTA 388
Query 63021 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 63080
|| | || |||| |||||||| || | |||| ||||||||| | ||||| | ||
Sbjct 389 TACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATTGACTTCCATAACTCT 448
Query 63081 CGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTATAGTGTATACAATCGTT 63138
|||| | | | | ||| || | ||| |||| || ||| | ||| | | ||
Sbjct 449 TGAGCTCTGACTT--GTTTTATAAACCGTTTTTCTTCTTCATATTTGGCATATAGTTCTT 506
Query 63139 CGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGAC 63197
|||| || ||||| || || | ||| || ||||| |||| |||||||| | |
Sbjct 507 CGAATTCCTCTCCATAA-CAGTCAGCAAGGCCGGGACAATCATGAGGACACATGAGACTC 565
Query 63198 CACTCTCCGTCATCCTTCACT---CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63254
|| ||| |||||||| || | ||||||||| ||||| || ||||| | ||| |
Sbjct 566 CAATCT---TCATCCTTTTCTACCCTTTTCATAAACAGATCTGGTATCCATAAAGCATAA 622
Query 63255 AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63314
|| || ||||| | || ||| || || ||||| |||||||| | ||| | |||| |
Sbjct 623 AACAGTTCTCTAGCTCGCATTTCTTCCTTACCTGTGTTCTTTTTTAAATCTAAGAACTCA 682
Query 63315 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63374
| || || | |||||| ||||| ||||| || || | | || || |||||||| ||
Sbjct 683 AATATGTCCGCATGCCAAGGTTCTAAGTAAATTGCAAATGCACCGGGACGTTTGTTGCCA 742
Query 63375 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63434
|| ||||||| ||||| || || || || || |||||||||||||| | | ||| ||
Sbjct 743 CCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACATTGGCACTAGACCATTC 802
Query 63435 GATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 63494
|| | ||||| || || | ||||| || || | |||| | | || |
Sbjct 803 GAAACCCCATTAGTGCCAGCTATATAAGACCCTTGAGCTCTAATACAATGTGTATGTAAA 862
Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554
||||| || ||||| |||||| |||||||| ||| ||||||| || ||| | |||||
Sbjct 863 CCTATGCCACCTGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCT 922
Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614
|| || ||||| || |||| | || || ||| || | || | || ||
Sbjct 923 TCAATACTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGTGGCCGCGGTGTA 982
Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674
| || || || ||||| || || ||||| |||| || || | | ||| ||
Sbjct 983 GCTGCTGAGAACAATGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCATATTATAA 1042
Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734
|| | || || || || || |||||| ||||| | ||| | ||| | ||||
Sbjct 1043 GTATTGATTGCACTATCAATGTCTTCACCATGAATCCCTACGGAGACTCTCATAAGCATG 1102
Query 63735 TGCTGAGGTCTTTCAAC 63751
|| ||||||||||||||
Sbjct 1103 TGTTGAGGTCTTTCAAC 1119
>seq157294
Length=2047
Score = 210 bits (232), Expect = 3e-49
Identities = 710/1092 (65%), Gaps = 29/1092 (3%)
Strand=Plus/Plus
Query 62571 CCTACATATGTATCGTATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627
||| |||||| ||||||||||| ||| ||| || | |||| || | || ||
Sbjct 750 CCTTCATATGATTCGTATGGTCCAAATTCTTTC---GCCAATTCAACGCTTTCTTCCAAG 806
Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687
||| |||| || ||||| || || || ||||| ||| |||||| | || |||
Sbjct 807 GCAGAAAAATACATCGTTTCAAATATTTTTGAATTTAAGTCTCTTGCTTCTTGACTGTCA 866
Query 62688 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62747
|| | ||| | | || ||| || || |||| ||| || | |||||| || ||||||
Sbjct 867 AACGCATATCTCATAAGGCAAAATGCATCTGCTAGTCCCTGTATACCAATTCCTATAGGT 926
Query 62748 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62807
|| |||||| ||||| || | |||| || ||||||| | | |||||||| |
Sbjct 927 CTGTGTCTCATATTACTTCTTCTACATTCTTCAACAGGATAAAATGTTGTATCTATACAT 986
Query 62808 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC 62867
| || |||||||| ||||||||| || || | | ||||| ||| ||||||
Sbjct 987 CTGTTAAGATTTCTTGTAATTACTTTAACTACTTGCGATAGTTTTTCAAAGTCAAATTTT 1046
Query 62868 CCATCTATTACAAACATGTTCAAGGCAACAGAT-GCCAGATTACAAACGGCTACCTCATT 62926
|||| || ||||| | ||| ||| | | |||| ||||||||| |||| |||||
Sbjct 1047 TCATCAATGACAAATTTTGACAAA-CAAATGCTCGCCAAATTACAAACTGCTATTTCATT 1105
Query 62927 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATT 62986
|| | ||||| || || || | |||||||| | | || || || ||||||||
Sbjct 1106 TTTGTCAGAATATTCGATAATTTCCGCACAAAGATTTGAAGATTTTATTGTACCTAAATT 1165
Query 62987 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 63046
|||||||||||| ||||||| | || |||||||| || | || ||||| |||||
Sbjct 1166 TTGTTGATTACTTAGCCTGTTACAAGTGTCTTTATAAAGCATATAAGGTGTACCCGTTTC 1225
Query 63047 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCT 63106
| || | ||||||||| |||||||| | || ||| |||| | || || ||| |
Sbjct 1226 TAATTGTGCTTCTATAATGGCTTTCCATAACTTTCTAGCTTTTACAACAG--TTCTAT-T 1282
Query 63107 CCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAA 63166
|| | |||| ||| ||| ||| | || || ||||||||||||| || |
Sbjct 1283 TTTTATTTTTTCATATTTGCAATATAATTTATTAAAATCTTCTCCCCAAACATCATCTAG 1342
Query 63167 TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 63226
|| || | ||||| | || ||||||||| | | | | ||||||| |||
Sbjct 1343 ACCTTTTGCCTCGTTTGGACAGAATAAAGACCACTCTTCATTTTTATCTACTCGTTCCAT 1402
Query 63227 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 63286
||| | ||| ||||| | |||||| || | ||||| | |||| || || | |
Sbjct 1403 AAATAAGTCATTTATCCATAAAGCTATGAAAACGTCTCTAGCTCTAATGTCTTCACTGCT 1462
Query 63287 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63346
||||| ||| | | ||| | ||| | | ||| || ||||| ||||| || || ||
Sbjct 1463 GGTATTTTTTCTTAAATCTAAGAAATCGAAAATGTCTTTGTGCCAAGGTTCTAAATAAAT 1522
Query 63347 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63406
|| | | | | | ||| |||| || |||| ||| ||| | ||| | |||
Sbjct 1523 TGCGACACTACTTGATCTTTTACTTCCGCCTTGATTTATATATTTTCTGGTATAATTCAT 1582
Query 63407 AACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGG-AGATAT---AGC 63462
||| | || |||||| || || | || || ||||| || ||| | |
Sbjct 1583 GACTTGTATCAGTGGAATTATTCC------TCGACTCTTTCCACCGGCAGCTATTAAATC 1636
Query 63463 --TTCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63518
|||| | | |||| | | ||||||| |||||||| || | ||||||
Sbjct 1637 CGATCCATTACTTCTAATACTGTGCAAATTGAT--GCCTATTCCACCGGAATATTTAGAA 1694
Query 63519 ATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTA 63578
|| | |||||| |||||| |||||||| || | ||||| ||| || || |
Sbjct 1695 ATGACTGCGCACTGTTTTATAGTGTCATAAATTCTTTCTATTGAATCTTCAATAGGACTC 1754
Query 63579 AGTAGAAAACAGCTAGACATTTGGTGA-CGACTAGTTCCCGCATTAAATAAGGTAGGAGA 63637
| || |||||| || | || || |||| | | || | || ||| ||||| || || |
Sbjct 1755 ATTAAAAAACAACTTGCCAATT-GTGACCTGTTTGTACACGAATTTAATAAAGTTGGTGT 1813
Query 63638 AGCGTGCGTAAA 63649
|||||| || ||
Sbjct 1814 AGCGTGAGTGAA 1825
>seq10486
Length=2602
Score = 206 bits (228), Expect = 3e-48
Identities = 461/685 (67%), Gaps = 13/685 (2%)
Strand=Plus/Plus
Query 61977 ATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAG 62036
|||||| | ||||| | || || ||||| | | | ||| ||||| || ||| |||
Sbjct 1921 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGTGTAAGTAG 1980
Query 62037 TACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 62096
|||||||| ||||||| ||| | |||| ||| ||||| || ||||||||| |
Sbjct 1981 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 2040
Query 62097 TAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTG 62156
|| | || | || | ||| || || | |||||||||||| || || || || || ||
Sbjct 2041 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCCCCTCTA 2100
Query 62157 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 62215
|| || ||||| | |||| || || ||| ||| ||||| | ||||| || || ||
Sbjct 2101 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTATAAATCT 2160
Query 62216 CTTAATATCTTCTGGAAGGTTTGTA--TTC-TGAATGGATCCACCATCTGCCATAATCCT 62272
||| || |||| || | ||| | ||| || || |||||| | |||||
Sbjct 2161 CTT-ATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 2219
Query 62273 ATTCTTGATCTCATCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGCGGAT 62331
||| || || || |||| |||||| | || | || ||| | | || ||||| | |
Sbjct 2220 ATTTTTCATATCTTCATCCCATAA-ATCAGCTAGAGTCAAATCAGTCAGAAGATGATGGT 2278
Query 62332 TAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTT 62391
| ||||| ||||||||||||| || ||||| | ||||||||| ||| | ||||
Sbjct 2279 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTT 2338
Query 62392 CCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCA 62451
| | || ||| | || || | |||||| ||||| || ||||||||||||||||| | ||
Sbjct 2339 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCA 2398
Query 62452 ATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCA 62509
||| | ||| | | ||| ||||| || || || ||||| || |||| |||||
Sbjct 2399 ATAGAGAATTCCGCAAACC--ATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCA 2456
Query 62510 AAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACG 62568
||| || | || || || ||||| | || || | ||
Sbjct 2457 AAGGTCTGTAGGAGTTTTGACCCACATATCATACTGGAGGATACCTTGGCTAGCTGGAC- 2515
Query 62569 ATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATG 62628
|||| |||||| ||||| ||||| || || |||| ||||||||| || |||||||
Sbjct 2516 TTCCTTGATATGTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATG 2575
Query 62629 CACCGTAATAAATGGTTTCGAAGAT 62653
|||| |||||||| ||||| || ||
Sbjct 2576 CACCATAATAAATTGTTTCAAATAT 2600
>seq55316
Length=1040
Score = 95.1 bits (104), Expect = 2e-14
Identities = 78/95 (82%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849
||||||| ||||||||||| | |||||||| ||||| || || ||||||||||| | |
Sbjct 466 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 407
Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
|| ||||| ||||||||||||||| ||||| ||
Sbjct 406 CATATGTCTGGATATTGGATTGGGAATATAACGAA 372
>seq229742
Length=505
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 63966 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCC 64025
|| || || || || |||| ||| |||| ||||||||||| || | ||||||||||||
Sbjct 250 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 309
Query 64026 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 64085
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 310 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 369
Query 64086 GTTACTCCATTATATATTCC 64105
||||| ||| |||||| ||
Sbjct 370 GTTACACCAGAATATATGCC 389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620824211516080
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