Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq59246 322 6e-83 seq157294 210 3e-49 seq10486 206 3e-48 seq55316 95.1 2e-14 seq229742 91.5 2e-13 >seq59246 Length=1357 Score = 322 bits (356), Expect = 6e-83 Identities = 699/1037 (67%), Gaps = 18/1037 (2%) Strand=Plus/Plus Query 62724 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62783 || |||||||||||||||||||| | || ||| |||| || ||| ||||| || | | Sbjct 92 CCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACA 151 Query 62784 GGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACA 62840 |||||| | |||| ||| || | ||| || | |||| | ||||| ||| | Sbjct 152 GGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAAT--CTTAGTGGTT- 208 Query 62841 TCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTACAAACATGTTCAAGGCAACAGAT 62900 || || | ||| ||||| |||| | || | ||||||||||| | || | || Sbjct 209 TCTTTTAATTTTTTAAAATGAAATTGATTATTTTCAACAAACATGTTAAGTGCTATGGAA 268 Query 62901 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 62960 || || || || || || || ||||| | | ||||| | | ||||||||||||| Sbjct 269 GCAAGGTTGCACACTGCCACTTCATTTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGA 328 Query 62961 TTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 63020 || ||||| || ||||| || | ||||| |||||||||||| |||| || ||||||||| Sbjct 329 TTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCCTGTTGCAAGCATCCTTA 388 Query 63021 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 63080 || | || |||| |||||||| || | |||| ||||||||| | ||||| | || Sbjct 389 TACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATTGACTTCCATAACTCT 448 Query 63081 CGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTATAGTGTATACAATCGTT 63138 |||| | | | | ||| || | ||| |||| || ||| | ||| | | || Sbjct 449 TGAGCTCTGACTT--GTTTTATAAACCGTTTTTCTTCTTCATATTTGGCATATAGTTCTT 506 Query 63139 CGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGAC 63197 |||| || ||||| || || | ||| || ||||| |||| |||||||| | | Sbjct 507 CGAATTCCTCTCCATAA-CAGTCAGCAAGGCCGGGACAATCATGAGGACACATGAGACTC 565 Query 63198 CACTCTCCGTCATCCTTCACT---CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63254 || ||| |||||||| || | ||||||||| ||||| || ||||| | ||| | Sbjct 566 CAATCT---TCATCCTTTTCTACCCTTTTCATAAACAGATCTGGTATCCATAAAGCATAA 622 Query 63255 AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63314 || || ||||| | || ||| || || ||||| |||||||| | ||| | |||| | Sbjct 623 AACAGTTCTCTAGCTCGCATTTCTTCCTTACCTGTGTTCTTTTTTAAATCTAAGAACTCA 682 Query 63315 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63374 | || || | |||||| ||||| ||||| || || | | || || |||||||| || Sbjct 683 AATATGTCCGCATGCCAAGGTTCTAAGTAAATTGCAAATGCACCGGGACGTTTGTTGCCA 742 Query 63375 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63434 || ||||||| ||||| || || || || || |||||||||||||| | | ||| || Sbjct 743 CCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACATTGGCACTAGACCATTC 802 Query 63435 GATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 63494 || | ||||| || || | ||||| || || | |||| | | || | Sbjct 803 GAAACCCCATTAGTGCCAGCTATATAAGACCCTTGAGCTCTAATACAATGTGTATGTAAA 862 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 ||||| || ||||| |||||| |||||||| ||| ||||||| || ||| | ||||| Sbjct 863 CCTATGCCACCTGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCT 922 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614 || || ||||| || |||| | || || ||| || | || | || || Sbjct 923 TCAATACTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGTGGCCGCGGTGTA 982 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 | || || || ||||| || || ||||| |||| || || | | ||| || Sbjct 983 GCTGCTGAGAACAATGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCATATTATAA 1042 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 || | || || || || || |||||| ||||| | ||| | ||| | |||| Sbjct 1043 GTATTGATTGCACTATCAATGTCTTCACCATGAATCCCTACGGAGACTCTCATAAGCATG 1102 Query 63735 TGCTGAGGTCTTTCAAC 63751 || |||||||||||||| Sbjct 1103 TGTTGAGGTCTTTCAAC 1119 >seq157294 Length=2047 Score = 210 bits (232), Expect = 3e-49 Identities = 710/1092 (65%), Gaps = 29/1092 (3%) Strand=Plus/Plus Query 62571 CCTACATATGTATCGTATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627 ||| |||||| ||||||||||| ||| ||| || | |||| || | || || Sbjct 750 CCTTCATATGATTCGTATGGTCCAAATTCTTTC---GCCAATTCAACGCTTTCTTCCAAG 806 Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 ||| |||| || ||||| || || || ||||| ||| |||||| | || ||| Sbjct 807 GCAGAAAAATACATCGTTTCAAATATTTTTGAATTTAAGTCTCTTGCTTCTTGACTGTCA 866 Query 62688 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62747 || | ||| | | || ||| || || |||| ||| || | |||||| || |||||| Sbjct 867 AACGCATATCTCATAAGGCAAAATGCATCTGCTAGTCCCTGTATACCAATTCCTATAGGT 926 Query 62748 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62807 || |||||| ||||| || | |||| || ||||||| | | |||||||| | Sbjct 927 CTGTGTCTCATATTACTTCTTCTACATTCTTCAACAGGATAAAATGTTGTATCTATACAT 986 Query 62808 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC 62867 | || |||||||| ||||||||| || || | | ||||| ||| |||||| Sbjct 987 CTGTTAAGATTTCTTGTAATTACTTTAACTACTTGCGATAGTTTTTCAAAGTCAAATTTT 1046 Query 62868 CCATCTATTACAAACATGTTCAAGGCAACAGAT-GCCAGATTACAAACGGCTACCTCATT 62926 |||| || ||||| | ||| ||| | | |||| ||||||||| |||| ||||| Sbjct 1047 TCATCAATGACAAATTTTGACAAA-CAAATGCTCGCCAAATTACAAACTGCTATTTCATT 1105 Query 62927 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATT 62986 || | ||||| || || || | |||||||| | | || || || |||||||| Sbjct 1106 TTTGTCAGAATATTCGATAATTTCCGCACAAAGATTTGAAGATTTTATTGTACCTAAATT 1165 Query 62987 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 63046 |||||||||||| ||||||| | || |||||||| || | || ||||| ||||| Sbjct 1166 TTGTTGATTACTTAGCCTGTTACAAGTGTCTTTATAAAGCATATAAGGTGTACCCGTTTC 1225 Query 63047 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCT 63106 | || | ||||||||| |||||||| | || ||| |||| | || || ||| | Sbjct 1226 TAATTGTGCTTCTATAATGGCTTTCCATAACTTTCTAGCTTTTACAACAG--TTCTAT-T 1282 Query 63107 CCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAA 63166 || | |||| ||| ||| ||| | || || ||||||||||||| || | Sbjct 1283 TTTTATTTTTTCATATTTGCAATATAATTTATTAAAATCTTCTCCCCAAACATCATCTAG 1342 Query 63167 TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 63226 || || | ||||| | || ||||||||| | | | | ||||||| ||| Sbjct 1343 ACCTTTTGCCTCGTTTGGACAGAATAAAGACCACTCTTCATTTTTATCTACTCGTTCCAT 1402 Query 63227 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 63286 ||| | ||| ||||| | |||||| || | ||||| | |||| || || | | Sbjct 1403 AAATAAGTCATTTATCCATAAAGCTATGAAAACGTCTCTAGCTCTAATGTCTTCACTGCT 1462 Query 63287 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63346 ||||| ||| | | ||| | ||| | | ||| || ||||| ||||| || || || Sbjct 1463 GGTATTTTTTCTTAAATCTAAGAAATCGAAAATGTCTTTGTGCCAAGGTTCTAAATAAAT 1522 Query 63347 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63406 || | | | | | ||| |||| || |||| ||| ||| | ||| | ||| Sbjct 1523 TGCGACACTACTTGATCTTTTACTTCCGCCTTGATTTATATATTTTCTGGTATAATTCAT 1582 Query 63407 AACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGG-AGATAT---AGC 63462 ||| | || |||||| || || | || || ||||| || ||| | | Sbjct 1583 GACTTGTATCAGTGGAATTATTCC------TCGACTCTTTCCACCGGCAGCTATTAAATC 1636 Query 63463 --TTCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63518 |||| | | |||| | | ||||||| |||||||| || | |||||| Sbjct 1637 CGATCCATTACTTCTAATACTGTGCAAATTGAT--GCCTATTCCACCGGAATATTTAGAA 1694 Query 63519 ATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTA 63578 || | |||||| |||||| |||||||| || | ||||| ||| || || | Sbjct 1695 ATGACTGCGCACTGTTTTATAGTGTCATAAATTCTTTCTATTGAATCTTCAATAGGACTC 1754 Query 63579 AGTAGAAAACAGCTAGACATTTGGTGA-CGACTAGTTCCCGCATTAAATAAGGTAGGAGA 63637 | || |||||| || | || || |||| | | || | || ||| ||||| || || | Sbjct 1755 ATTAAAAAACAACTTGCCAATT-GTGACCTGTTTGTACACGAATTTAATAAAGTTGGTGT 1813 Query 63638 AGCGTGCGTAAA 63649 |||||| || || Sbjct 1814 AGCGTGAGTGAA 1825 >seq10486 Length=2602 Score = 206 bits (228), Expect = 3e-48 Identities = 461/685 (67%), Gaps = 13/685 (2%) Strand=Plus/Plus Query 61977 ATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAG 62036 |||||| | ||||| | || || ||||| | | | ||| ||||| || ||| ||| Sbjct 1921 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGTGTAAGTAG 1980 Query 62037 TACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 62096 |||||||| ||||||| ||| | |||| ||| ||||| || ||||||||| | Sbjct 1981 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 2040 Query 62097 TAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTG 62156 || | || | || | ||| || || | |||||||||||| || || || || || || Sbjct 2041 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCCCCTCTA 2100 Query 62157 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 62215 || || ||||| | |||| || || ||| ||| ||||| | ||||| || || || Sbjct 2101 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTATAAATCT 2160 Query 62216 CTTAATATCTTCTGGAAGGTTTGTA--TTC-TGAATGGATCCACCATCTGCCATAATCCT 62272 ||| || |||| || | ||| | ||| || || |||||| | ||||| Sbjct 2161 CTT-ATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 2219 Query 62273 ATTCTTGATCTCATCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGCGGAT 62331 ||| || || || |||| |||||| | || | || ||| | | || ||||| | | Sbjct 2220 ATTTTTCATATCTTCATCCCATAA-ATCAGCTAGAGTCAAATCAGTCAGAAGATGATGGT 2278 Query 62332 TAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTT 62391 | ||||| ||||||||||||| || ||||| | ||||||||| ||| | |||| Sbjct 2279 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTT 2338 Query 62392 CCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCA 62451 | | || ||| | || || | |||||| ||||| || ||||||||||||||||| | || Sbjct 2339 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCA 2398 Query 62452 ATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCA 62509 ||| | ||| | | ||| ||||| || || || ||||| || |||| ||||| Sbjct 2399 ATAGAGAATTCCGCAAACC--ATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCA 2456 Query 62510 AAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACG 62568 ||| || | || || || ||||| | || || | || Sbjct 2457 AAGGTCTGTAGGAGTTTTGACCCACATATCATACTGGAGGATACCTTGGCTAGCTGGAC- 2515 Query 62569 ATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATG 62628 |||| |||||| ||||| ||||| || || |||| ||||||||| || ||||||| Sbjct 2516 TTCCTTGATATGTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATG 2575 Query 62629 CACCGTAATAAATGGTTTCGAAGAT 62653 |||| |||||||| ||||| || || Sbjct 2576 CACCATAATAAATTGTTTCAAATAT 2600 >seq55316 Length=1040 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849 ||||||| ||||||||||| | |||||||| ||||| || || ||||||||||| | | Sbjct 466 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 407 Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 || ||||| ||||||||||||||| ||||| || Sbjct 406 CATATGTCTGGATATTGGATTGGGAATATAACGAA 372 >seq229742 Length=505 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 63966 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCC 64025 || || || || || |||| ||| |||| ||||||||||| || | |||||||||||| Sbjct 250 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 309 Query 64026 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 64085 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 310 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 369 Query 64086 GTTACTCCATTATATATTCC 64105 ||||| ||| |||||| || Sbjct 370 GTTACACCAGAATATATGCC 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620824211516080