Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq59246 122 2e-22 seq3260 89.7 1e-12 >seq59246 Length=1357 Score = 122 bits (134), Expect = 2e-22 Identities = 440/678 (65%), Gaps = 14/678 (2%) Strand=Plus/Minus Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 |||||| | || || ||||| ||| || ||||| |||||| || || ||||| ||| Sbjct 972 CCACAGCTTTCCTCCTGCTTCCTTATAGCTATGAAAGACGATAGTATTGAAGGTATTTTT 913 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 || || | || | ||||| | ||||| || |||||| || || ||| || || Sbjct 912 GATACTTTAAAACAATGTGCATTAATTTCTAAATCTGCAGGTGGCATAGGTTTAC--ATA 855 Query 363712 CACAATGT--TCGTGCACAGAACAGTTACATTCGCGGCAC--AGGGGGATACTCGAATGG 363767 |||| ||| | | || || ||| || ||||| | |||| | |||||||| Sbjct 854 CACATTGTATTAGAGCTCAAGGGTCTTATATAGCTGGCACTAATGGGGTT--TCGAATGG 797 Query 363768 GCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGG 363827 || || || ||| | | |||| |||||||||| || || || || || ||||| Sbjct 796 TCTAGTGCCAATGTTGAGAGTGTACAACAATACTGCCAGATATGTAGATCAAGGTGGCAA 737 Query 363828 AAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTT 363887 || || || || ||||| || || | || ||| ||||| || || |||||||| Sbjct 736 CAAACGTCCCGGTGCATTTGCAATTTACTTAGAACCTTGGCATGCGGACATATTTGAGTT 677 Query 363888 TCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGC 363947 | || | || ||||| || || || ||| |||| || | || ||||| ||||| Sbjct 676 CTTAGATTTAAAAAAGAACACAGGTAAGGAAGAAATGCGAGCTAGAGAACTGTTTTATGC 617 Query 363948 ACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTT 364007 | ||| | | || | |||||||| | || || | | | ||||| ||| | Sbjct 616 TTTATGGATACCAGATCTGTTTATGAAAAGGGTAGAAAAGGATGAAGATTGGAGTCTCAT 557 Query 364008 TTGCCCACACGAATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTAT 364066 || || || || ||||| || ||| | || ||| | || || || | | | |||| Sbjct 556 GTGTCCTCATGATTGTCCCGGCCTTGCTGACTGT-TATGGAGAGGAATTCGAAGAACTAT 498 Query 364067 ACGAAAAGTATGAATCGGAGGGAAA-GGCTCGTAAGACAATTCCC-GCACAGAAGCTATG 364124 | | || |||||| | || ||| || | ||| |||| || || || || |||| Sbjct 497 ATGCCAAATATGAA--GAAGAAAAACGGTTTATAAAACAAGTCAGAGCTCAAGAGTTATG 440 Query 364125 GTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTC 364184 | | || || || | || | ||||| || ||||| ||||||||||| || ||| | Sbjct 439 GAAGTCAATTATAGAAGCTCAAGTGGAGACTGGTACACCATATATGTTGTATAAGGATGC 380 Query 364185 GTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTAC 364244 |||||| | ||| || || | | ||||| || ||| | ||||| || || || Sbjct 379 TTGCAACAGGAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGCAC 320 Query 364245 CGAGATTATTGAATACAC 364262 ||| || | ||||||| Sbjct 319 TGAGGTTGTGCAATACAC 302 >seq3260 Length=4440 Score = 89.7 bits (98), Expect = 1e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 65872 TTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACGC 65931 ||||| | ||||| ||||||| |||| | ||| | ||||||| | || |||| Sbjct 1847 TTACGGACAGTTCCATCATAATGTACCATAACAGATTCCATAGCCTTTATTAAACGACGC 1788 Query 65932 TGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGAC 65991 || ||||||||| | | |||||||||||||| ||||||| |||||||||||| || | Sbjct 1787 TGAATGTAACCAGTTTCAGCAGTTTTTACCGCAGTATCAATGAGACCTTCACGACCTCCC 1728 Query 65992 ATTGCAGAAAAGAAAAACTCAG 66013 || || || ||||||||| Sbjct 1727 ATGGCGTGGAAATAAAACTCAG 1706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1298800758602916