Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq51813 212 5e-50 seq89394 159 3e-34 seq98588 116 3e-21 seq38040 107 2e-18 seq22409 93.3 4e-14 seq49094 82.4 6e-11 >seq51813 Length=3444 Score = 212 bits (234), Expect = 5e-50 Identities = 539/809 (67%), Gaps = 21/809 (3%) Strand=Plus/Minus Query 32249 CATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAACGATGCCCTCAAA 32308 ||| || | || || |||||||| ||||||||||| ||||| |||| || | | ||| Sbjct 1258 CATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAATGACAGCTTAAAA 1199 Query 32309 ACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGCGCAGACTTTAAG 32368 ||| |||||||| | || |||||||| || || | ||||| | |||||||| Sbjct 1198 GAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCGTGAGGACTTTAAA 1139 Query 32369 GTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGCGTGTCTGCGTGG 32428 || | || ||||| || ||||| ||| |||||||||| || || || ||||| | ||| Sbjct 1138 GTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGG 1079 Query 32429 AACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTGGCAAACCCTCAC 32488 ||||| ||||||||||||||||| |||||||| ||| | || || ||| | Sbjct 1078 AACGAGCCCTACAAAGGCAACTTCGGCCAATTAATGTCACTAAAACAAGCCCGCCCGGAA 1019 Query 32489 ATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCCCTTTT--ATTTTA-TG 32545 | || ||| | || |||||||| ||||||||| | | ||||| |||| ||||| | Sbjct 1018 TTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCTTTTTTCTTTTTAGTT 959 Query 32546 CACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTTTTACAGGTTTGG 32605 | | | || | |||| ||||| | || || || |||||| | | ||| Sbjct 958 GATAAATC--TAAGAGAACACG-ATTTGTGCAGTCAGTAAAGGAGTTTCTTCTAACATGG 902 Query 32606 AAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAAGGTGCCAACCCG 32665 |||||||| || || || || || ||||||||||| || || ||||||||||| ||||| Sbjct 901 AAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGCAAAGGTGCTAACCCT 842 Query 32666 GCGCTCGGTAACGGGGAGCGCGACGCGCACACGTACATTATTTTGTTACAAGAATTGCGT 32725 | ||||||| | || || | | || | | |||| | ||||||| ||| Sbjct 841 GACCTCGGTAGCCCAGA---AGATGGTGATTGCTATGTAAGTTTGATGAAAGAATTACGT 785 Query 32726 TCTATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTACGAGTTGACTAGCGCAAT 32784 ||||| || || || ||| | | | ||||| | ||||| |||||| || || Sbjct 784 GAGATGCTCGATGAGCTCTCAGCT-AAGAATGGCAAGAAATACGAATTGACTTCTGCTAT 726 Query 32785 TAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATG--AAGCCGCGCAAAAGTACCTC 32842 ||| | || || ||||| || || | || | ||| || ||||| || | Sbjct 725 TAGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAG--GCTCAAAATTATATG 668 Query 32843 GATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTAACACCGATTTGGGC 32902 ||| | || || | ||||| || ||||| || || || ||||| || | | | || Sbjct 667 GATCATATTTTCTTGATGAGCTATGACTTCAAGGGAGCCTGGTCAAATGACACTCTTGGA 608 Query 32903 TATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATTGTACACCACAGATCAC 32962 |||| || | |||||||| || ||||||||| | ||| ||||| | || | Sbjct 607 CATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAACTTACACATCTGACTTC 548 Query 32963 GCTGTTAAA---TTGTTAACAAGTCAAGGTGTAGCTTCTTACAAAATCATTGTCGGCATC 33019 | || ||| ||||| || || || || | || | || || | | || | Sbjct 547 GGAGTAAAATATTTGTTGGCA---CAGGGAGTGAATCCTAAGAAGATTGTATTAGGTGTT 491 Query 33020 GCCATGTACGGTCGCGGGTGGACGGGCGT 33048 |||||||| ||||| || ||||| ||||| Sbjct 490 GCCATGTATGGTCGTGGTTGGACTGGCGT 462 >seq89394 Length=1369 Score = 159 bits (176), Expect = 3e-34 Identities = 182/242 (75%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 109259 TGCGCA-CTTTTGCAGAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAG 109317 |||||| ||| || || |||||||| | |||| ||| ||||||| |||| || ||| Sbjct 683 TGCGCAGCTTCAGC-GACTGGCCTCGCAGCATGAAGCAGAAACCCGAAGAACTCGCAGAG 741 Query 109318 GCCGGGTTTTATTACACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGT 109377 || || || | ||||| |||||||| || ||||| || || || || ||||||||||| Sbjct 742 GCGGGATTCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGG 801 Query 109378 TTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGT 109437 | || ||||||||| ||||| | ||||||| | | ||||||||| ||||| ||||| Sbjct 802 CTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGG 861 Query 109438 TGCCCTTACGTGTTGCTTGTTAAGGGTCGAGATTATGTGCAAAAAATTGTAACGGAATCG 109497 ||| ||||||| ||| || ||||| ||||| ||||| || || | | ||||| || Sbjct 862 TGCGCTTACGTCCAGCTGGTAAAGGGCCGAGACTATGTACAGAAGGTGATCACGGAGGCG 921 Query 109498 TG 109499 || Sbjct 922 TG 923 Score = 86.0 bits (94), Expect = 5e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 109047 CGGATTTTATTATTTGGGTCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAAT 109106 ||| || ||||| |||| |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 396 CGGCTTCTATTACCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAAT 455 Query 109107 AATGCGTTGGCTTGAGGGTGACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTG 109166 ||| ||| | | ||| ||||| || || ||||| || | | ||||| || || Sbjct 456 TATGAAATGGGTAGCGGGCGACGATCCCGCCAAGGACCACCAACGGTGGGCGCCCCAATG 515 Query 109167 TCCGTTC 109173 ||| ||| Sbjct 516 TCCCTTC 522 >seq98588 Length=355 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| ||||| || || ||||| |||||||| | ||| ||| || Sbjct 114 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 173 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | |||||| ||||| || ||||| ||| |||| ||||||| Sbjct 174 GATACTATTGAAAACGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 233 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | ||||| | ||| || || ||||| ||||||| || | |||| || ||| Sbjct 234 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGACTACAAC 293 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||||||| |||||| | || |||| ||| | | || || |||| Sbjct 294 ATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGGAA 342 >seq38040 Length=2861 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || |||||||| ||||| | ||| || | Sbjct 2691 ATGCAAATTTTTGTTAAAACACTTACAGGAAAAACAATTACGTTAGAAGTTGAAGCTTCT 2632 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || || |||||| || ||||||||| | || ||||| Sbjct 2631 GACACAATTGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 2572 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | |||| ||| || || ||||| ||||| | | ||| | |||| || ||| Sbjct 2571 CAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGACTACAAC 2512 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| || || | || ||||| || | ||||||||||| Sbjct 2511 ATTCAAAAAGAATCCACCCTCCACCTGGTGCTGCGTTTGCGAGGAGG 2465 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| |||||||| || || || ||||| ||||| || | || |||| ||| | Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAG-CCATC 2405 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | | ||||| ||||| || |||||||| |||| ||||| Sbjct 2404 TGACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCA 2345 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||| | ||| || || ||||| ||||||| ||| | | || || || Sbjct 2344 ACAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTATCTGACTACAA 2285 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| ||||| | || | || || | ||||||||||| Sbjct 2284 TATTCAAAAAGAATCTACCCTTCACCTAGTACTGCGTTTGCGAGGAGG 2237 >seq22409 Length=1756 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || || ||||| |||||||||||| |||| ||| || Sbjct 1664 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAAGCCTC 1605 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| | | | | |||||| |||||| ||||| ||||| | || || || Sbjct 1604 TGATACTATAGAAAATGTAAAAGCGAAAATTCAAGATAAGGAAGGTATTCCACCAGACCA 1545 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | ||| || ||||| ||||||||| || || | || || || Sbjct 1544 GCAACGTTTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCTGACTACAA 1485 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||||||| || || || | ||| | ||| Sbjct 1484 CATTCAAAAGGAATCCACATTGCATCTTGTG 1454 >seq49094 Length=1117 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || || || || || || || || | ||| ||| | Sbjct 684 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 743 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || || ||||||| |||||||| ||| | ||| ||||| Sbjct 744 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 803 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||||| |||| ||| || || || | ||||||| || || | || || || Sbjct 804 GCAAAGACTAATTTTTGCTGGAAAGCAGCTCGAAGATGGACGTACACTGTCAGACTACAA 863 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| || || ||||| | ||| | || || | || |||| |||| Sbjct 864 TATTCAGAAGGAATCTACCTTGCATTTAGTACTGCGTCTGAGAGGTGGAA 913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423930677324560