Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq51813 168 5e-37
seq38040 98.7 8e-16
seq98588 96.9 3e-15
>seq51813
Length=3444
Score = 168 bits (186), Expect = 5e-37
Identities = 585/900 (65%), Gaps = 27/900 (3%)
Strand=Plus/Plus
Query 96116 GTTTTCGTAATT-TGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAA 96174
|| |||||||| ||| || |||||||| || ||||| |||||||| || || | | ||
Sbjct 446 GTCTTCGTAATCATGA-ACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAA 504
Query 96175 TTTTGCGCGGGTCCACGCCTTGATTTGTGAGCAA---TTTAACGGCATGGTCCGTGTTGT 96231
| || || | ||| || || || | ||| ||| || | ||| | |||
Sbjct 505 TCTTCTTAGGATTCACTCCCTG---TGCCAACAAATATTTTACTCCGAAGTCAGATGTGT 561
Query 96232 ACAGCTCGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAA---TCAA 96288
| || || || ||||| |||||||||| || ||||| | ||| | | |||
Sbjct 562 AAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTGTCA- 620
Query 96289 TGTTTGACCACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTT 96348
|||||||| || || || || || |||||||| | || || | || | | ||||
Sbjct 621 --TTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATATGATCCATATAATTTT 678
Query 96349 GCGCAACGTCGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCA 96408
| || | |||| | || || ||||| || || | || || ||| ||||
Sbjct 679 GAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCA 738
Query 96409 ACTCGTACGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCTAACATCACGCGCAATTCCTTT 96467
| ||||| | ||||| | | || || | ||| || | |||| | || ||||| ||
Sbjct 739 ATTCGTATTTCTTGCCATTCTT-AGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTC 797
Query 96468 AATAGAATGTTGTACGTGTCAGCGTCGCGCTCTTTGTTGCCGAGCGTC-GGGTTGGCGCC 96526
| | | | || ||| | || ||| | | ||||| ||| ||||| || ||
Sbjct 798 ATCAAACTTACATAGCAATCACCATCT---TCTGGGCTACCGAG-GTCAGGGTTAGCACC 853
Query 96527 TTTACCGCCCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAA 96586
||| || || ||||| ||||| ||||| || || || ||||| |||||||| | |
Sbjct 854 TTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGAAG 913
Query 96587 AAATTCTCTGACGGAGTCTACAAACACGCGCCGTTTTTCCGCGTCGTGCATGTAATAGAA 96646
||| || | || || | ||||| || | | | | | | | || ||||
Sbjct 914 AAACTCCTTTACTGACTGCACAAAT---CGTGTTCTCTTAGATTTATCAACTAAAAAGAA 970
Query 96647 C---GGGTCGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGC 96703
|| |||| || ||||| || || ||||| || ||||| || | | || ||
Sbjct 971 AAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCCGGGCGGGC 1030
Query 96704 CAGTTTGGCCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACAC 96763
|||| | ||| || || || |||||||||||||||||||||||||| | |||||
Sbjct 1031 TTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAA 1090
Query 96764 GCCCTTTTGCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGA 96823
|| ||||| |||||||||| ||| ||||| || ||||| || | |||||||| ||
Sbjct 1091 TCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTC 1150
Query 96824 ACGGCCCTGGCAAGAGCGTTGCAGCGCTTCAAAACTACCGGGTATGGTTTTAAGGGCATC 96883
|||||| || || |||||||| |||| ||||| || || ||| | | ||
Sbjct 1151 ACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTGTC 1210
Query 96884 GTTAAGGCCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGG 96943
|| | |||||| ||||| |||||||| ||||| || || | |||||| | | || ||
Sbjct 1211 ATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGG 1270
Query 96944 CAGCGGCACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGC 97003
| || | ||||| || || || | | ||| || |||||||| || || || ||
Sbjct 1271 TATAGGTATACGATCCACGGGGAACTTTCTAGGATAGACACCCCATTCTACGAAGTAGGC 1330
>seq38040
Length=2861
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||| | | ||| |||| || || ||||| || ||||| |||||||||||||
Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | |||| |||||||| || || ||| |||| | || ||||| || |||
Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||| |||||||| ||||| ||| || | | | ||||| | || |
Sbjct 2585 ATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACT 2644
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | || || |||||||| || || ||||| |||||||| |||||
Sbjct 2645 TCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||| || | ||||||| || || |||||||| || || || ||||| || | |
Sbjct 1781 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGAC 1840
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | || |||||||| || || ||| | || || ||||||||||| ||
Sbjct 1841 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGG 1900
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||| || || || |||| |||||| | | | ||||| || || |
Sbjct 1901 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 1960
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||| ||||| ||||| |||| ||||| ||||| || |||||
Sbjct 1961 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007
>seq98588
Length=355
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | || ||||| || || || || || ||||| |||||||||||||
Sbjct 340 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 281
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | || |||||||| || || ||| | ||||| ||||| || || ||
Sbjct 280 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 221
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||||||||| || || ||| || || | | | ||| || ||| |||
Sbjct 220 ATGCCCTCTTTGTCTTGGATTTTAGCT--TTTACGTTTTCAATAGTATCAGAGGGTTCCA 163
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| || ||||| ||||| || || ||||| ||||||||||||||
Sbjct 162 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403741983467620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |