Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq51813 168 5e-37 seq38040 98.7 8e-16 seq98588 96.9 3e-15 >seq51813 Length=3444 Score = 168 bits (186), Expect = 5e-37 Identities = 585/900 (65%), Gaps = 27/900 (3%) Strand=Plus/Plus Query 96116 GTTTTCGTAATT-TGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAA 96174 || |||||||| ||| || |||||||| || ||||| |||||||| || || | | || Sbjct 446 GTCTTCGTAATCATGA-ACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAA 504 Query 96175 TTTTGCGCGGGTCCACGCCTTGATTTGTGAGCAA---TTTAACGGCATGGTCCGTGTTGT 96231 | || || | ||| || || || | ||| ||| || | ||| | ||| Sbjct 505 TCTTCTTAGGATTCACTCCCTG---TGCCAACAAATATTTTACTCCGAAGTCAGATGTGT 561 Query 96232 ACAGCTCGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAA---TCAA 96288 | || || || ||||| |||||||||| || ||||| | ||| | | ||| Sbjct 562 AAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTGTCA- 620 Query 96289 TGTTTGACCACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTT 96348 |||||||| || || || || || |||||||| | || || | || | | |||| Sbjct 621 --TTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATATGATCCATATAATTTT 678 Query 96349 GCGCAACGTCGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCA 96408 | || | |||| | || || ||||| || || | || || ||| |||| Sbjct 679 GAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCA 738 Query 96409 ACTCGTACGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCTAACATCACGCGCAATTCCTTT 96467 | ||||| | ||||| | | || || | ||| || | |||| | || ||||| || Sbjct 739 ATTCGTATTTCTTGCCATTCTT-AGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTC 797 Query 96468 AATAGAATGTTGTACGTGTCAGCGTCGCGCTCTTTGTTGCCGAGCGTC-GGGTTGGCGCC 96526 | | | | || ||| | || ||| | | ||||| ||| ||||| || || Sbjct 798 ATCAAACTTACATAGCAATCACCATCT---TCTGGGCTACCGAG-GTCAGGGTTAGCACC 853 Query 96527 TTTACCGCCCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAA 96586 ||| || || ||||| ||||| ||||| || || || ||||| |||||||| | | Sbjct 854 TTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGAAG 913 Query 96587 AAATTCTCTGACGGAGTCTACAAACACGCGCCGTTTTTCCGCGTCGTGCATGTAATAGAA 96646 ||| || | || || | ||||| || | | | | | | | || |||| Sbjct 914 AAACTCCTTTACTGACTGCACAAAT---CGTGTTCTCTTAGATTTATCAACTAAAAAGAA 970 Query 96647 C---GGGTCGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGC 96703 || |||| || ||||| || || ||||| || ||||| || | | || || Sbjct 971 AAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCCGGGCGGGC 1030 Query 96704 CAGTTTGGCCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACAC 96763 |||| | ||| || || || |||||||||||||||||||||||||| | ||||| Sbjct 1031 TTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAA 1090 Query 96764 GCCCTTTTGCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGA 96823 || ||||| |||||||||| ||| ||||| || ||||| || | |||||||| || Sbjct 1091 TCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTC 1150 Query 96824 ACGGCCCTGGCAAGAGCGTTGCAGCGCTTCAAAACTACCGGGTATGGTTTTAAGGGCATC 96883 |||||| || || |||||||| |||| ||||| || || ||| | | || Sbjct 1151 ACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTGTC 1210 Query 96884 GTTAAGGCCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGG 96943 || | |||||| ||||| |||||||| ||||| || || | |||||| | | || || Sbjct 1211 ATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGG 1270 Query 96944 CAGCGGCACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGC 97003 | || | ||||| || || || | | ||| || |||||||| || || || || Sbjct 1271 TATAGGTATACGATCCACGGGGAACTTTCTAGGATAGACACCCCATTCTACGAAGTAGGC 1330 >seq38040 Length=2861 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| | | ||| |||| || || ||||| || ||||| ||||||||||||| Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| |||||||| || || ||| |||| | || ||||| || ||| Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| |||||||| ||||| ||| || | | | ||||| | || | Sbjct 2585 ATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACT 2644 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || || |||||||| || || ||||| |||||||| ||||| Sbjct 2645 TCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||||||| || || |||||||| || || || ||||| || | | Sbjct 1781 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGAC 1840 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || |||||||| || || ||| | || || ||||||||||| || Sbjct 1841 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGG 1900 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| || || || |||| |||||| | | | ||||| || || | Sbjct 1901 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 1960 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||| ||||| ||||| |||| ||||| ||||| || ||||| Sbjct 1961 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 >seq98588 Length=355 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || ||||| || || || || || ||||| ||||||||||||| Sbjct 340 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 281 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || |||||||| || || ||| | ||||| ||||| || || || Sbjct 280 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 221 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||||||||| || || ||| || || | | | ||| || ||| ||| Sbjct 220 ATGCCCTCTTTGTCTTGGATTTTAGCT--TTTACGTTTTCAATAGTATCAGAGGGTTCCA 163 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || ||||| ||||| || || ||||| |||||||||||||| Sbjct 162 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403741983467620