Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq93763 185 6e-42
seq38040 147 1e-30
seq51 140 2e-28
seq49094 118 7e-22
seq22409 93.3 3e-14
seq80369 91.5 1e-13
seq60889 89.7 3e-13
seq117761 84.2 1e-11
seq33669 84.2 1e-11
>seq93763
Length=982
Score = 185 bits (204), Expect = 6e-42
Identities = 134/155 (86%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221
|||||| || ||||||| || | || |||||||||||||||||||||||||| ||||||
Sbjct 737 ATGGGGTCCTTGAACGTGAACAGGAACGTGGCGGACGCGTTCTACCGCTACAAGATGCCG 796
Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281
||||||||||||||||||||||| ||||||||||| || || |||||||| || ||||||
Sbjct 797 CGCATCTGCGCCAAGGTCGAGGGCAAGGGAAACGGCATCAAGACCGTCATCGTTAACATG 856
Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCAC 6316
|| || |||||||||||||| || | || |||||
Sbjct 857 CCAGAGGTCGCTAAGGCGCTTGGCAGGCCGGCCAC 891
>seq38040
Length=2861
Score = 147 bits (162), Expect = 1e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| |||| || ||| | ||||| ||||| ||| ||| || ||||||||||||||||
Sbjct 1779 TACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAG 1838
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||||| || | || || ||||| || || |||||||| || || ||||| || | ||
Sbjct 1839 ACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGG 1898
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| |||||| || ||| ||||| ||||||||||| || || || ||| |
Sbjct 1899 GGATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTA 1958
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| | ||||| || || || ||||| |||||||| ||||| |||||
Sbjct 1959 CTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007
Score = 125 bits (138), Expect = 5e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| |||| |||||||| ||||| || || ||| || |||||||| ||||| || |
Sbjct 2463 TACCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGG 2522
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | || |||| || ||||| ||||| ||||| || | ||||||||||| | |
Sbjct 2523 AAAGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAG 2582
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||||||||| |||||| ||| ||||| | | || || | |||||
Sbjct 2583 GAATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAA 2642
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||||| ||||| ||||| || || | ||||| || || || |||||
Sbjct 2643 CTTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691
Score = 89.7 bits (98), Expect = 3e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| || | | |||||| || ||||| ||||| |||||||||||||| |||||||
Sbjct 2691 TACCGCCGCGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG 2750
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | ||| | || || | ||||||||| ||||| || || | ||||| || | ||
Sbjct 2751 ATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGG 2810
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245
| | ||||||||||| || ||| |||||||||
Sbjct 2811 GAATACCTTCTTTGTCTTGGATCTTTGCCTTCACATT 2847
Score = 86.0 bits (94), Expect = 4e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| |||| |||||||| || | ||||| || || |||||||||||||| ||||
Sbjct 2235 TACCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAG 2294
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | || | || || ||||| || || ||||| || || ||||||||||| | |
Sbjct 2295 ATAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAG 2354
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245
||| ||||||||||| ||||| ||| |||||
Sbjct 2355 GGATACCTTCTTTGTCTTGGATTTTAGCCTTTACATT 2391
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||| || ||| | || | |||||| || ||||||||| || ||||| ||||
Sbjct 2007 TACCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAG 2066
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || ||| | || || || || || |||||||| || || ||||||||||| | |
Sbjct 2067 ATAAGGTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAG 2126
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || ||||| || ||| || ||| || || | | ||||| || |
Sbjct 2127 GAATACCCTCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTATCAGATGGCTCCA 2186
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| |||| || ||||| || || || | || || || ||||| |||||
Sbjct 2187 CCTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2235
>seq51
Length=8754
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1531 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 1590
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 1591 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1625
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4030 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 4089
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 4090 GGTAATATTTAGCCTTA 4106
>seq49094
Length=1117
Score = 118 bits (130), Expect = 7e-22
Identities = 166/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| |||||||||| ||||| || ||||| | || ||||| ||||||||||| |
Sbjct 915 CATT-CCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGT 857
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| |||| |||| | || || | || ||||| ||||| ||||| | ||| ||||| |
Sbjct 856 CTGACAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTG 797
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||| | ||| ||||| ||| ||||||| ||| ||||| | | ||||| | ||
Sbjct 796 GGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTT 737
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||| | ||| ||||| || || |||| || || || || || |||||
Sbjct 736 CCACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 685
Score = 113 bits (124), Expect = 3e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162
|||| |||||| || | ||| ||||| |||||||| ||||| |||| ||| |
Sbjct 671 CGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCA 612
Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222
|| |||| |||||||| ||||| || || | ||||| |||| || | |||||||||
Sbjct 611 TCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTG 552
Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282
|| ||||||| ||| ||||| | | ||||| | ||| ||||| ||||||||
Sbjct 551 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATC 492
Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||| || |||| || || || || || |||||
Sbjct 491 GTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 457
Score = 104 bits (114), Expect = 2e-17
Identities = 163/232 (70%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| |||||||||| || | || || || | ||| ||||| ||||||||||| |
Sbjct 459 CATT-CCACCTCTCAGCCGTAGTACTAAGTGCAAAGTAGATTCCTTCTGAATATTGTAGT 401
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
|||| | ||| | || || | || ||||| ||||| || || | ||||||||| |
Sbjct 400 CAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTG 341
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||| | ||| ||||| ||| ||||||| ||| ||||| | | ||||| | ||
Sbjct 340 GGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTT 281
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||| | ||| ||||| || || |||| || || || || || |||||
Sbjct 280 CCACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 229
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
||||| || || || || ||||||| || | || || | ||| ||||| || ||
Sbjct 1103 TCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAA 1044
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| | | |||||| || | |||| |||||| ||||| ||| ||| ||| |||||
Sbjct 1043 ATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTT 984
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| || || || | ||| || ||||| |||||||||||||| |||| ||||| |||
Sbjct 983 TCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAGTCAGTGTTTTAACG 924
Query 38307 AATATCTGCAT 38317
|| || |||||
Sbjct 923 AAAATTTGCAT 913
>seq22409
Length=1756
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
||||||||||| ||||| |||||||| |||| | || |||| ||||| || |||||
Sbjct 1473 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAG 1532
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| | ||||| || || | || | ||||| || || |||||| || |||||
Sbjct 1533 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTCGCTTTTACATTT 1592
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| | |||||| ||| || || | ||||| ||||||||||| | ||| || |||
Sbjct 1593 TCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 1652
Query 38307 AATATCTGCAT 38317
|| || |||||
Sbjct 1653 AAAATTTGCAT 1663
>seq80369
Length=3501
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTT----C 38161
||||| | ||| || || || ||||| || |||||||||||||| | |||| |
Sbjct 404 AACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGATA----GCGTTCTAGC 349
Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221
|| || | ||| || || ||||| || || | || ||||| | || | ||| || ||
Sbjct 348 ATCCTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTT 289
Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281
||| || ||| || ||||||| || |||||| | | || ||||| ||||| ||
Sbjct 288 GTCTTCTATCTTTGCTTTTACATTCTCGATAGTATCACTAGACTCTACTTCCAATGTTAT 229
Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || || || ||||| || || ||||||||
Sbjct 228 TGTCTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193
>seq60889
Length=898
Score = 89.7 bits (98), Expect = 3e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| || | | |||||| || ||||| ||||| |||||||||||||| |||||||
Sbjct 773 TACCGCCGCGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG 714
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | ||| | || || | ||||||||| ||||| || || | ||||| || | ||
Sbjct 713 ATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGG 654
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245
| | ||||||||||| || ||| |||||||||
Sbjct 653 GAATACCTTCTTTGTCTTGGATCTTTGCCTTCACATT 617
>seq117761
Length=1917
Score = 84.2 bits (92), Expect = 1e-11
Identities = 116/160 (73%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 7160 CGCGCTTAAACTGCTGTACGACCTAGACATAGTACAAGAGAAAACGATCATGGAGTGGTT 7219
||| || || ||||| |||||||| ||||| || | ||| | | |||| |||
Sbjct 1915 CGCCCTCAAGCTGCTCTACGACCTGGACATCGTGGACGAGCGCGCCGTGCTGGACTGGGC 1856
Query 7220 CCACAAGCCGTCGTGCAAG-ACTCTCAGCAAAGAAGTGATGGCTGACGTGCACCGCCGCG 7278
| |||||| ||| |||| || | | ||| || ||| |||||||||||| || ||||
Sbjct 1855 CGCCAAGCCCTCGCGCAAATACGCGCC-CAAGGAGGTGGTGGCTGACGTGCTGCGGCGCG 1797
Query 7279 CGCAGCCCTTCCTGAACTGGCTGCAGCAAGCCGAGGATGA 7318
|||| ||||| || | ||||||||||| ||||| || ||
Sbjct 1796 CGCAACCCTTTCTCGAGTGGCTGCAGCAGGCCGACGAGGA 1757
>seq33669
Length=2832
Score = 84.2 bits (92), Expect = 1e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
|| || || || ||||| ||||| || ||||| || |||||||| || ||| ||||||
Sbjct 2194 CCCACTAAGTACTTCGGATGCGAGCTCGGCGCCCAAACGCAGTTCGACTTCAAGAACGAG 2135
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGA 6424
||||||||||| ||||| ||| |||| |||||| |||| ||
Sbjct 2134 CGCTTCATCGTCAACGGCAGCCATGACTCCGCCAAGTTGCAAGA 2091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 333834245608178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |