Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq93763 185 6e-42 seq38040 147 1e-30 seq51 140 2e-28 seq49094 118 7e-22 seq22409 93.3 3e-14 seq80369 91.5 1e-13 seq60889 89.7 3e-13 seq117761 84.2 1e-11 seq33669 84.2 1e-11 >seq93763 Length=982 Score = 185 bits (204), Expect = 6e-42 Identities = 134/155 (86%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221 |||||| || ||||||| || | || |||||||||||||||||||||||||| |||||| Sbjct 737 ATGGGGTCCTTGAACGTGAACAGGAACGTGGCGGACGCGTTCTACCGCTACAAGATGCCG 796 Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281 ||||||||||||||||||||||| ||||||||||| || || |||||||| || |||||| Sbjct 797 CGCATCTGCGCCAAGGTCGAGGGCAAGGGAAACGGCATCAAGACCGTCATCGTTAACATG 856 Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCAC 6316 || || |||||||||||||| || | || ||||| Sbjct 857 CCAGAGGTCGCTAAGGCGCTTGGCAGGCCGGCCAC 891 >seq38040 Length=2861 Score = 147 bits (162), Expect = 1e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||| || ||| | ||||| ||||| ||| ||| || |||||||||||||||| Sbjct 1779 TACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAG 1838 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||||| || | || || ||||| || || |||||||| || || ||||| || | || Sbjct 1839 ACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGG 1898 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||| || ||| ||||| ||||||||||| || || || ||| | Sbjct 1899 GGATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTA 1958 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||||| || || || ||||| |||||||| ||||| ||||| Sbjct 1959 CTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||| |||||||| ||||| || || ||| || |||||||| ||||| || | Sbjct 2463 TACCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGG 2522 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || |||| || ||||| ||||| ||||| || | ||||||||||| | | Sbjct 2523 AAAGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAG 2582 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||||||||| |||||| ||| ||||| | | || || | ||||| Sbjct 2583 GAATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAA 2642 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| ||||| ||||| || || | ||||| || || || ||||| Sbjct 2643 CTTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 Score = 89.7 bits (98), Expect = 3e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | | |||||| || ||||| ||||| |||||||||||||| ||||||| Sbjct 2691 TACCGCCGCGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG 2750 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| | || || | ||||||||| ||||| || || | ||||| || | || Sbjct 2751 ATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGG 2810 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 | | ||||||||||| || ||| ||||||||| Sbjct 2811 GAATACCTTCTTTGTCTTGGATCTTTGCCTTCACATT 2847 Score = 86.0 bits (94), Expect = 4e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||| |||||||| || | ||||| || || |||||||||||||| |||| Sbjct 2235 TACCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAG 2294 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || ||||| || || ||||| || || ||||||||||| | | Sbjct 2295 ATAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAG 2354 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 ||| ||||||||||| ||||| ||| ||||| Sbjct 2355 GGATACCTTCTTTGTCTTGGATTTTAGCCTTTACATT 2391 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||| || ||| | || | |||||| || ||||||||| || ||||| |||| Sbjct 2007 TACCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAG 2066 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || ||| | || || || || || |||||||| || || ||||||||||| | | Sbjct 2067 ATAAGGTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAG 2126 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||| || ||| || ||| || || | | ||||| || | Sbjct 2127 GAATACCCTCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTATCAGATGGCTCCA 2186 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||| || ||||| || || || | || || || ||||| ||||| Sbjct 2187 CCTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2235 >seq51 Length=8754 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1531 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 1590 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1591 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1625 Score = 140 bits (154), Expect = 2e-28 Identities = 77/77 (100%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4030 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 4089 Query 20007 GGTAATATTTAGCCTTA 20023 ||||||||||||||||| Sbjct 4090 GGTAATATTTAGCCTTA 4106 >seq49094 Length=1117 Score = 118 bits (130), Expect = 7e-22 Identities = 166/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||||| ||||| || ||||| | || ||||| ||||||||||| | Sbjct 915 CATT-CCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGT 857 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | |||| |||| | || || | || ||||| ||||| ||||| | ||| ||||| | Sbjct 856 CTGACAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTG 797 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||| | ||| ||||| ||| ||||||| ||| ||||| | | ||||| | || Sbjct 796 GGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTT 737 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | ||| ||||| || || |||| || || || || || ||||| Sbjct 736 CCACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 685 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 |||| |||||| || | ||| ||||| |||||||| ||||| |||| ||| | Sbjct 671 CGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCA 612 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || |||| |||||||| ||||| || || | ||||| |||| || | ||||||||| Sbjct 611 TCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTG 552 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282 || ||||||| ||| ||||| | | ||||| | ||| ||||| |||||||| Sbjct 551 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATC 492 Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || |||| || || || || || ||||| Sbjct 491 GTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 457 Score = 104 bits (114), Expect = 2e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||||| || | || || || | ||| ||||| ||||||||||| | Sbjct 459 CATT-CCACCTCTCAGCCGTAGTACTAAGTGCAAAGTAGATTCCTTCTGAATATTGTAGT 401 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| | ||| | || || | || ||||| ||||| || || | ||||||||| | Sbjct 400 CAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTG 341 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||| | ||| ||||| ||| ||||||| ||| ||||| | | ||||| | || Sbjct 340 GGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTT 281 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | ||| ||||| || || |||| || || || || || ||||| Sbjct 280 CCACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 229 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| || || || || ||||||| || | || || | ||| ||||| || || Sbjct 1103 TCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAA 1044 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || | | |||||| || | |||| |||||| ||||| ||| ||| ||| ||||| Sbjct 1043 ATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTT 984 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | || || || | ||| || ||||| |||||||||||||| |||| ||||| ||| Sbjct 983 TCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAGTCAGTGTTTTAACG 924 Query 38307 AATATCTGCAT 38317 || || ||||| Sbjct 923 AAAATTTGCAT 913 >seq22409 Length=1756 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||||||||| ||||| |||||||| |||| | || |||| ||||| || ||||| Sbjct 1473 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAG 1532 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || | ||||| || || | || | ||||| || || |||||| || ||||| Sbjct 1533 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTCGCTTTTACATTT 1592 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | |||||| ||| || || | ||||| ||||||||||| | ||| || ||| Sbjct 1593 TCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 1652 Query 38307 AATATCTGCAT 38317 || || ||||| Sbjct 1653 AAAATTTGCAT 1663 >seq80369 Length=3501 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTT----C 38161 ||||| | ||| || || || ||||| || |||||||||||||| | |||| | Sbjct 404 AACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGATA----GCGTTCTAGC 349 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | ||| || || ||||| || || | || ||||| | || | ||| || || Sbjct 348 ATCCTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTT 289 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| || ||| || ||||||| || |||||| | | || ||||| ||||| || Sbjct 288 GTCTTCTATCTTTGCTTTTACATTCTCGATAGTATCACTAGACTCTACTTCCAATGTTAT 229 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || || ||||| || || |||||||| Sbjct 228 TGTCTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193 >seq60889 Length=898 Score = 89.7 bits (98), Expect = 3e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | | |||||| || ||||| ||||| |||||||||||||| ||||||| Sbjct 773 TACCGCCGCGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG 714 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| | || || | ||||||||| ||||| || || | ||||| || | || Sbjct 713 ATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGG 654 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 | | ||||||||||| || ||| ||||||||| Sbjct 653 GAATACCTTCTTTGTCTTGGATCTTTGCCTTCACATT 617 >seq117761 Length=1917 Score = 84.2 bits (92), Expect = 1e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 7160 CGCGCTTAAACTGCTGTACGACCTAGACATAGTACAAGAGAAAACGATCATGGAGTGGTT 7219 ||| || || ||||| |||||||| ||||| || | ||| | | |||| ||| Sbjct 1915 CGCCCTCAAGCTGCTCTACGACCTGGACATCGTGGACGAGCGCGCCGTGCTGGACTGGGC 1856 Query 7220 CCACAAGCCGTCGTGCAAG-ACTCTCAGCAAAGAAGTGATGGCTGACGTGCACCGCCGCG 7278 | |||||| ||| |||| || | | ||| || ||| |||||||||||| || |||| Sbjct 1855 CGCCAAGCCCTCGCGCAAATACGCGCC-CAAGGAGGTGGTGGCTGACGTGCTGCGGCGCG 1797 Query 7279 CGCAGCCCTTCCTGAACTGGCTGCAGCAAGCCGAGGATGA 7318 |||| ||||| || | ||||||||||| ||||| || || Sbjct 1796 CGCAACCCTTTCTCGAGTGGCTGCAGCAGGCCGACGAGGA 1757 >seq33669 Length=2832 Score = 84.2 bits (92), Expect = 1e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || || || ||||| ||||| || ||||| || |||||||| || ||| |||||| Sbjct 2194 CCCACTAAGTACTTCGGATGCGAGCTCGGCGCCCAAACGCAGTTCGACTTCAAGAACGAG 2135 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGA 6424 ||||||||||| ||||| ||| |||| |||||| |||| || Sbjct 2134 CGCTTCATCGTCAACGGCAGCCATGACTCCGCCAAGTTGCAAGA 2091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333834245608178