Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq49094 152 4e-32 seq38040 149 5e-31 seq22409 123 2e-23 seq98588 122 8e-23 seq60889 109 5e-19 seq4357 104 2e-17 seq80369 93.3 4e-14 >seq49094 Length=1117 Score = 152 bits (168), Expect = 4e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||||||||| |||| || ||| | || ||| | |||||||| | || Sbjct 456 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACGATTACATTGGAAGTGGAAGCTTC 515 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || || | || ||||||| ||| ||||||||||| ||||| || |||| Sbjct 516 TGATACAATAGAAAATGTTAAGGCAAAAATTCA-AGACAAAGAAGGTATTCCTCCCGACC 574 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| || |||||||||| || ||||| ||||||||| ||| || || ||||| | Sbjct 575 AACAGAGGCTTATTTTTGCAGGAAAACAGCTAGAAGATGGTCGTACGCTGTCAGATTATA 634 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||| || ||||| || | || || ||||| | || || || |||| Sbjct 635 ATATTCAGAAGGAATCAACTTTGCACTTGGTGCTGCGCCTTAGGGGGGGAA 685 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||||||||| |||| || || | |||||| | |||||||| | || Sbjct 228 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 287 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || || | || ||||||| ||| || ||||| || ||||| || || | Sbjct 288 TGATACAATTGAAAATGTTAAGGCAAAAATTCA-GGATAAAGAGGGCATTCCCCCAGATC 346 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | |||||||||| || || || | ||||||| ||||| | || |||| Sbjct 347 AACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACA 406 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||| || ||||| || | || ||||| ||| |||| ||||| |||| Sbjct 407 ATATTCAGAAGGAATCTACTTTGCACTTAGTACTACGGCTGAGAGGTGGAA 457 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||||||||| |||| || || | |||||| | |||||||| | || Sbjct 684 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 743 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || || | || ||||||| ||| || ||||| || ||||| || || | Sbjct 744 TGATACAATTGAAAATGTTAAGGCAAAAATTCA-GGATAAAGAGGGCATTCCCCCAGATC 802 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || | | |||||||| || || || | ||||||| || || || || |||| Sbjct 803 AGCAAAGACTAATTTTTGCTGGAAAGCAGCTCGAAGATGGACGTACACTGTCAGACTACA 862 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||| || ||||| || | |||||||| || | || ||||| |||| Sbjct 863 ATATTCAGAAGGAATCTACCTTGCATTTAGTACTGCGTCTGAGAGGTGGAA 913 >seq38040 Length=2861 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| || || ||||| || || |||| || | ||||| || | ||| Sbjct 2007 ATGCAAATATTTGTGAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1948 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||| ||||| || || ||||| || || || |||||| Sbjct 1947 GACACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCAA 1888 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || ||||| ||||||| ||||||| || ||||||||| Sbjct 1887 CAGCGTCTCATATTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 1828 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| ||||| ||||| || || || || || | || ||||||| Sbjct 1827 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGG 1781 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| | || || || |||| || | || |||||| | ||| Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 2404 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| |||||| ||||||||||| || || || || ||| Sbjct 2403 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 2344 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||| ||||| || || ||||| ||||||| |||||| | || |||||| Sbjct 2343 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTATCTGACTACAAT 2284 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||||||||| || || || |||| || Sbjct 2283 ATTCAAAAAGAATCTACCCTTCACCTAGTACT 2252 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || | || || ||| | || || | ||||| || | ||| Sbjct 2691 ATGCAAATTTTTGTTAAAACACTTACAGGAAAAACAATTACGTTAGAAGTTGAAGCTTCT 2632 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | |||| ||| ||||||||||| ||||| || || || Sbjct 2631 GACACAATTGAAAATGTTAAGGCTAAAATTCAA-GACAAAGAAGGCATTCCTCCAGATCA 2573 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | |||||||| || || ||||| ||||| | ||||| | ||| ||||| Sbjct 2572 ACAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGACTACAA 2513 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||||||||||| || || | ||||| Sbjct 2512 CATTCAAAAAGAATCCACCCTCCACCTGGTGCT 2480 Score = 111 bits (122), Expect = 1e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 25057 CTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||| || || ||||| ||| ||| ||||||||||| ||||| || |||| Sbjct 2861 CTGACACAATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACC 2802 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| || | |||||||| || |||||| | ||||||| || || | ||||| | Sbjct 2801 AACAGAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATA 2742 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||||||| ||||| || ||||||||||| Sbjct 2741 ATATTCAAAAGGAATCTACTCTACATTTAGT 2711 Score = 109 bits (120), Expect = 5e-19 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | || || ||| | |||||| | |||||||| | || Sbjct 1779 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCA 1720 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || | || |||| || | || |||||||| || ||||| || || Sbjct 1719 GACACTATTGAA--AATGTTAAAGCCAAGATCCAA-GACAAAGAGGGTATTCCCCCAGAT 1663 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | ||||| || || || || | || |||| |||||| || || ||| Sbjct 1662 CAACAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTAC 1603 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || | |||||||| || Sbjct 1602 AACATCCAAAAAGAATCTACTTTGCATTTAGTACT 1568 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| | || || || | || || | || |||||| | ||| Sbjct 2235 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACTATAACTCTAGAGGTGGAGCCATCT 2176 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || | ||| | || | ||| || ||||| || ||||| || || || Sbjct 2175 GATACCATTGAAAACGTAAAGGCTAAGATTCAA-GATAAAGAGGGTATTCCTCCAGATCA 2117 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||||||||| || || ||||||| || || | || ||||| Sbjct 2116 ACAACGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGGCGTACCTTATCTGACTACAA 2057 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || || || || ||| | || ||| | || |||| || Sbjct 2056 CATCCAAAAGGAGTCTACCCTTCATCTTGTACTACGTCTGCGAGGTGG 2009 >seq22409 Length=1756 Score = 123 bits (136), Expect = 2e-23 Identities = 160/218 (73%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 ||||||||||| || || ||||| | || |||||| |||| || |||| ||||| | Sbjct 1666 ACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAAGCC 1607 Query 25056 TCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 ||||| ||||| || | || |||| |||| ||| || || ||||| |||||||| Sbjct 1606 TCTGATACTAT--AGAAAATGTAAAAGCGAAAATTCA-AGATAAGGAAGGTATTCCACCA 1550 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 ||||| || || | || ||||| || ||||| ||||||||| || || || || Sbjct 1549 GACCAGCAACGTTTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCTGAC 1490 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| |||||||| |||||||| | ||| | ||||| Sbjct 1489 TACAACATTCAAAAGGAATCCACATTGCATCTTGTGCT 1452 >seq98588 Length=355 Score = 122 bits (134), Expect = 8e-23 Identities = 156/213 (73%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | || || || |||| || | |||||||| | ||| Sbjct 114 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 173 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || ||||| || || | |||| |||| || |||||||| || || |||||||| Sbjct 174 GATACTATTGAAAACGTAA---AAGCTAAAATCCAA-GACAAAGAGGGCATCCCACCTGA 229 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| |||| ||||| || || ||||| ||||||| ||||||| | ||| || Sbjct 230 TCAGCAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGACTA 289 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||| |||||||||||||| || || || || || Sbjct 290 CAACATTCAAAAAGAATCTACTCTTCACTTGGT 322 >seq60889 Length=898 Score = 109 bits (120), Expect = 5e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 25075 TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTG 25134 ||||| ||| ||| ||||||||||| ||||| || ||||||||| || | ||||||| Sbjct 621 TGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTG 680 Query 25135 CCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCA 25194 | || |||||| | ||||||| || || | ||||| ||||||||||| ||||| | Sbjct 681 CTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATAATATTCAAAAGGAATCTA 740 Query 25195 CGCTACATTTAGT 25207 | ||||||||||| Sbjct 741 CTCTACATTTAGT 753 >seq4357 Length=5862 Score = 104 bits (114), Expect = 2e-17 Identities = 144/198 (73%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 51090 ACCCACATAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGC 51149 ||| |||||| |||||||| | || || || ||||||||||| || | | || || Sbjct 4493 ACCAACATAACCATTAGGATCTCTGCCGTCAACACTGTAATGATCATTCAAGTAAATAGC 4434 Query 51150 ATAACCCAATGCCATGTCTGC--ACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTAC 51207 | | ||| ||| || | ||| || ||||||||| ||| |||||| ||||||| Sbjct 4433 AAATTTCAAAGCCTGTTCAGGCGACTGGG--TCCATTCCAAAATCTTCTTGCACCAGTAC 4376 Query 51208 ATGCGCATGTAACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCC 51265 ||||| | | |||| |||||||||||||| || | ||||| |||||| ||||||| Sbjct 4375 ATGCGTAGGAAACCATGCATCTTGCCCTCTTTCACC--AGCTGTATTTGAGCTGAGTTCC 4318 Query 51266 ACAATTCGTCGTGAGTTT 51283 | | |||||||| |||| Sbjct 4317 ATAGGTCGTCGTGTGTTT 4300 >seq80369 Length=3501 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || || || || || | || ||| | ||||| ||||| | Sbjct 193 ATGCAGATCTTTGTTAAAACATTAACAGGAAAGACAATAACATTGGAAGTAGAGTCTAGT 252 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||||||| | || ||||||| | | ||||| || || |||||||| || Sbjct 253 GATACTATCGAG--AATGTAAAAGCAAAGATAGAA-GACAAGGAGGGCATTCCACCAGAT 309 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || |||| ||||| || || ||| | || |||| | | || | |||||| Sbjct 310 CAGCAGAGGCTTATCTTTGCTGGTAAGCAACTCGAGGATGCTAGAACGCTATCTGATTAC 369 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 ||||| || || ||| || || ||| | ||| |||| ||| | || || || Sbjct 370 AATATCCAGAAGGAAAGTACACTGCATCTTGTGTTAAGACTACGTGGGGGTAA 422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 431888148283970