Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq55316 147 2e-30
seq70647 129 7e-25
seq210326 118 1e-21
seq63803 93.3 5e-14
>seq55316
Length=1040
Score = 147 bits (162), Expect = 2e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414
||| | ||| || || || ||||| | ||| ||||| || ||||| ||||| ||||||||
Sbjct 809 ATCCCTTATATAAGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATTGC 750
Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474
|||||| || || ||||| || || ||||| || | || || ||||| || || | |||
Sbjct 749 AATTTGAAACCCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTC 690
Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534
|| | || ||||| || |||||||| || || ||||| || || || | ||| || ||
Sbjct 689 CACTAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGAT 630
Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570
|||||||||||| |||||| | | ||||||||
Sbjct 629 AAAATGTTTCTCGCAATCTTTTAATGTCTCCCAATC 594
Score = 140 bits (154), Expect = 4e-28
Identities = 110/132 (83%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649
|| |||||||| ||||||||||||||||||| |||||||| ||||| | ||||||||||
Sbjct 457 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATGTCT 398
Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709
||||||| ||||| ||||| || ||||| ||||||| ||| | | | ||||| |||
Sbjct 397 GGATATTGGATTGGGAATATAACGAAACGTCTAGGGTTTTCTCTCAACAGAGGCTCAAGT 338
Query 93710 TGTGGGTCAAAC 93721
||||||||||||
Sbjct 337 TGTGGGTCAAAC 326
>seq70647
Length=913
Score = 129 bits (142), Expect = 7e-25
Identities = 80/85 (94%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 323 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 382
Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||
Sbjct 383 TGGGTTCGAACCCCACACCTGACAA 407
>seq210326
Length=301
Score = 118 bits (130), Expect = 1e-21
Identities = 153/213 (72%), Gaps = 13/213 (6%)
Strand=Plus/Plus
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
||||||||||| ||||| || || | || ||||||||| || | ||||||||||||||||
Sbjct 49 TCATTGCTGAAAGTTAATCCGGGCATCAATCCTCGTTTTTTCAACCAAAATATTGAAGCA 108
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGG----- 93248
|| || || || |||||||| | || || || ||||| || | ||||||||| |
Sbjct 109 AAGCTGCCTGAGAAAAATATTTCCTCAACTGCCGCAAAAGCGATAATACGTTCTGNNNNN 168
Query 93249 -------CAAAAT-TTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTT 93300
|||| | || | || |||| |||||| | ||| ||||| || || || ||
Sbjct 169 NNNNNNNNNAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTT 228
Query 93301 CTTAATACAAGGTAGTGTTTCGATAGCGTTAAA 93333
|| ||||| ||||| || || || || || ||
Sbjct 229 TTTTATACATGGTAGAGTCTCAATTGCATTGAA 261
>seq63803
Length=1726
Score = 93.3 bits (102), Expect = 5e-14
Identities = 96/125 (77%), Gaps = 3/125 (2%)
Strand=Plus/Minus
Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACA 92801
||| || |||||||||| ||||| |||||||| | || | | | ||| || || ||
Sbjct 369 TTAAAATTCTGCATCTAAGGTAAACACATTGTCCATAGGTTGCGT---CATCACTCCCCA 313
Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861
||||||||||| |||||||| || |||||||| ||||| || |||||||| || ||
Sbjct 312 CTTTTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTCCAATGAGATGAG 253
Query 92862 ATTCA 92866
|||||
Sbjct 252 ATTCA 248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 554963032315120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |