Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq55316 147 2e-30 seq70647 129 7e-25 seq210326 118 1e-21 seq63803 93.3 5e-14 >seq55316 Length=1040 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 ||| | ||| || || || ||||| | ||| ||||| || ||||| ||||| |||||||| Sbjct 809 ATCCCTTATATAAGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATTGC 750 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 |||||| || || ||||| || || ||||| || | || || ||||| || || | ||| Sbjct 749 AATTTGAAACCCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTC 690 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 || | || ||||| || |||||||| || || ||||| || || || | ||| || || Sbjct 689 CACTAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGAT 630 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570 |||||||||||| |||||| | | |||||||| Sbjct 629 AAAATGTTTCTCGCAATCTTTTAATGTCTCCCAATC 594 Score = 140 bits (154), Expect = 4e-28 Identities = 110/132 (83%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649 || |||||||| ||||||||||||||||||| |||||||| ||||| | |||||||||| Sbjct 457 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATGTCT 398 Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709 ||||||| ||||| ||||| || ||||| ||||||| ||| | | | ||||| ||| Sbjct 397 GGATATTGGATTGGGAATATAACGAAACGTCTAGGGTTTTCTCTCAACAGAGGCTCAAGT 338 Query 93710 TGTGGGTCAAAC 93721 |||||||||||| Sbjct 337 TGTGGGTCAAAC 326 >seq70647 Length=913 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 323 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 382 Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||||||||||| Sbjct 383 TGGGTTCGAACCCCACACCTGACAA 407 >seq210326 Length=301 Score = 118 bits (130), Expect = 1e-21 Identities = 153/213 (72%), Gaps = 13/213 (6%) Strand=Plus/Plus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 ||||||||||| ||||| || || | || ||||||||| || | |||||||||||||||| Sbjct 49 TCATTGCTGAAAGTTAATCCGGGCATCAATCCTCGTTTTTTCAACCAAAATATTGAAGCA 108 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGG----- 93248 || || || || |||||||| | || || || ||||| || | ||||||||| | Sbjct 109 AAGCTGCCTGAGAAAAATATTTCCTCAACTGCCGCAAAAGCGATAATACGTTCTGNNNNN 168 Query 93249 -------CAAAAT-TTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTT 93300 |||| | || | || |||| |||||| | ||| ||||| || || || || Sbjct 169 NNNNNNNNNAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTT 228 Query 93301 CTTAATACAAGGTAGTGTTTCGATAGCGTTAAA 93333 || ||||| ||||| || || || || || || Sbjct 229 TTTTATACATGGTAGAGTCTCAATTGCATTGAA 261 >seq63803 Length=1726 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/125 (77%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACA 92801 ||| || |||||||||| ||||| |||||||| | || | | | ||| || || || Sbjct 369 TTAAAATTCTGCATCTAAGGTAAACACATTGTCCATAGGTTGCGT---CATCACTCCCCA 313 Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 ||||||||||| |||||||| || |||||||| ||||| || |||||||| || || Sbjct 312 CTTTTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTCCAATGAGATGAG 253 Query 92862 ATTCA 92866 ||||| Sbjct 252 ATTCA 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554963032315120