Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq98588 125 6e-24 seq60889 118 9e-22 seq38040 118 9e-22 seq49094 111 1e-19 seq89394 89.7 4e-13 >seq98588 Length=355 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| |||||||| ||||| | || || || |||||||| ||||| ||||||| Sbjct 114 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 173 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | |||||| ||||| |||||||| ||| | || ||||| Sbjct 174 GATACTATTGAAAACGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 233 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | ||||| | ||| || || |||||||||||| | ||| | |||| || || Sbjct 234 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGACTACAAC 293 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || |||||||||||||| || || || || |||||||| || ||||| Sbjct 294 ATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGG 340 >seq60889 Length=898 Score = 118 bits (130), Expect = 9e-22 Identities = 109/136 (80%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 ||||||||||| ||||| || ||||| ||||| |||| ||| || |||||| ||||| Sbjct 638 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 697 Query 111340 GATT--CTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGT 111397 ||| | | ||||| | ||||||||||| ||||| |||||||| ||||||||||| | Sbjct 698 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 755 Query 111398 TGCGTCTGCGCGGTGG 111413 ||||||| ||||| || Sbjct 756 TGCGTCTTCGCGGCGG 771 >seq38040 Length=2861 Score = 118 bits (130), Expect = 9e-22 Identities = 109/136 (80%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 ||||||||||| ||||| || ||||| ||||| |||| ||| || |||||| ||||| Sbjct 2826 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 2767 Query 111340 GATT--CTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGT 111397 ||| | | ||||| | ||||||||||| ||||| |||||||| ||||||||||| | Sbjct 2766 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 2709 Query 111398 TGCGTCTGCGCGGTGG 111413 ||||||| ||||| || Sbjct 2708 TGCGTCTTCGCGGCGG 2693 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| |||||||| || | || || || ||||| || | || ||| || Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 2404 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | ||||| ||||| ||||||||||| | || |||||| Sbjct 2403 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 2344 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111364 ||| | ||||| | ||| || || |||||||||||| || | |||| | || || | Sbjct 2343 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTAT--CTGACTACA 2286 Query 111365 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 |||| |||||||||||||| || || |||| ||||| |||| || || Sbjct 2285 ATATTCAAAAAGAATCTACCCTTCACCTAGTACTGCGTTTGCGAGGAGG 2237 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| || || | || || ||||| || || | ||| ||||||| Sbjct 1779 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCA 1720 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | || ||| || || |||||||| || ||||| |||||| Sbjct 1719 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1660 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| || || || || |||| ||| ||| || | || || || Sbjct 1659 CAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 1600 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || |||||||||||||| | |||||||| | ||||| |||||||| Sbjct 1599 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTCTTCGCGGTGG 1553 >seq49094 Length=1117 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||||||||| || || |||| |||||||| ||||| ||||| |||| | Sbjct 456 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACGATTACATTGGAAGTGGAAGCTTC 515 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | | | | || || ||||||| ||||||||||| |||| ||| || Sbjct 516 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCA 575 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| |||||||||| ||| || ||||| | |||||| | || || | |||||||| Sbjct 576 ACAGAGGCTTATTTTTGCAGGAAAACAGCTAGAAGATGGTCGTACGCTGTCAGATTATAA 635 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCT 111404 ||| || || ||||| || | || || ||| |||| || Sbjct 636 TATTCAGAAGGAATCAACTTTGCACTTGGTGCTGCGCCT 674 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||||||||| || || |||| ||||| || || || ||||| |||| | Sbjct 684 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 743 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | || || ||||||| || ||||| ||| ||||| ||||| Sbjct 744 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 803 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||||| || |||| ||| || || || | |||||| || || | || || || Sbjct 804 GCAAAGACTAATTTTTGCTGGAAAGCAGCTCGAAGATGGACGTACACTGTCAGACTACAA 863 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| || || |||||||| | |||||||| |||||||| | ||||| Sbjct 864 TATTCAGAAGGAATCTACCTTGCATTTAGTACTGCGTCTGAGAGGTGG 911 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||||||||| || || |||| ||||| || || || ||||| |||| | Sbjct 228 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 287 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | || || ||||||| || ||||| ||| ||||| ||||| Sbjct 288 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 347 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 111363 |||||| ||||||| ||| || || || | |||||| | | ||||| | || || Sbjct 348 ACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 405 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| || || |||||||| | || ||||| | || ||| | ||||| Sbjct 406 AATATTCAGAAGGAATCTACTTTGCACTTAGTACTACGGCTGAGAGGTGG 455 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| ||||| ||||||||||||| || || ||||| |||| | Sbjct 1 ATGCAAATTTTTGTTAAAACACTGACCGGCAAAACTATCACATTGGAAGTGGAAGCTTCT 60 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | | | | ||||| ||| ||| ||||| |||||| |||| |||||| Sbjct 61 GATACAATCGAGAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 120 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||| | |||| || || || ||| |||||||| || || | || |||||| Sbjct 121 CAAAGATTAATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACACTGTCAGACTATAAT 180 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || | || || ||| | || || | ||||| Sbjct 181 ATTCAGAAGGAATCGACTTTGCACTTGGTGCTACGCCTTAGGGGTGG 227 >seq89394 Length=1369 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 105162 AACGGGTTCTACTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTCTGCAAAGTGGAA 105221 ||||| ||||| || |||| |||| || ||||| ||||||||||| || ||||| ||| Sbjct 394 AACGGCTTCTATTACCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 453 Query 105222 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCCGTAGATCATAAACGATGGGCGCCACAG 105281 || ||| ||| | | ||||||||| || ||| || || |||| |||||||| || Sbjct 454 ATTATGAAATGGGTAGCGGGCGACGATCCCGCCAAGGACCACCAACGGTGGGCGCCCCAA 513 Query 105282 TGCCCGTTTTTGCG 105295 || || || |||| Sbjct 514 TGTCCCTTCCTGCG 527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421634332999600