Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq51 152 4e-32
seq38040 111 1e-19
seq4357 86.0 5e-12
seq49094 84.2 2e-11
>seq51
Length=8754
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 7764 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 7823
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
|||||||||||||||||||||||| ||||||| |||||
Sbjct 7824 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 7861
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 7764 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 7823
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
|||||||||||||||||||||||| ||||||| |||||
Sbjct 7824 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 7861
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Plus
Query 114145 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 114195
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 7702 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 7753
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Plus
Query 115342 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 115392
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 7702 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 7753
>seq38040
Length=2861
Score = 111 bits (122), Expect = 1e-19
Identities = 166/232 (72%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
|||||||| || ||||||||||| || || ||| || || ||||||||||| || |
Sbjct 2464 ACCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTC-GG 2522
Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
|| || || |||| ||||||||||| || ||||| |||| || || ||||| |
Sbjct 2523 AAAGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAG 2582
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATT 34075
| | || |||||||| |||||| ||||| | | || | |||| || ||
Sbjct 2583 GAATGCCTTCTTTGTCTTGAATTTTAGCCTTAA---CATTTTCAATTGTGTCAGAAGCTT 2639
Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
| ||| | ||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct 2640 CAACTTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
|||||||| ||| || || |||| ||||| ||| ||| |||||||| |||||||| |
Sbjct 1780 ACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGA 1839
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
||| || | || ||||||||||| || |||||||| || ||||| || || ||
Sbjct 1840 CAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGG 1899
Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGC 34078
| || || || ||| ||||| ||| | ||| | | |||| | |||
Sbjct 1900 GATGCCTTCCTTATCCTGTATTTTAGCCTTCA-CATTCTCGATTGTGTCAGATGGTTCTA 1958
Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||| | || || || ||||| || | |||||||||||| ||||||||
Sbjct 1959 CTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007
>seq4357
Length=5862
Score = 86.0 bits (94), Expect = 5e-12
Identities = 128/178 (72%), Gaps = 4/178 (2%)
Strand=Plus/Plus
Query 37842 TGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCATG 37901
|||||| | |||||||| ||||| ||| ||||| ||||||||| | | ||||||
Sbjct 4317 TGGAACTCAGCTCAAATACAGCTGGTGAAAGAGGGCAAGATGCATGGTTTCCTACGCATG 4376
Query 37902 TATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC--GCGCTCAACTACG 37959
|| ||||||||||| |||||||||||| | | | || | || | || | || | |
Sbjct 4377 TACTGGTGCAAGAAGATTTTGGAATGGACCCA-GTCGC-CTGAACAGGCTTTGAAATTTG 4434
Query 37960 CCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGG 38017
| ||||| | |||||| | ||||| | ||||| | ||||| || ||||| || ||
Sbjct 4435 CTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGATCCTAATGGTTATGTTGG 4492
>seq49094
Length=1117
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/231 (68%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| |||||||| ||||| || | ||| | || ||||||||||| ||||| |||| |
Sbjct 911 CCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTGAC 852
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| | || | || || | ||||| || ||||| || || | |||||||| ||
Sbjct 851 AGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGGGA 792
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTCG 34077
| || |||||| ||| ||||||| ||||| | | || |||||| || |||
Sbjct 791 ATGCCCTCTTTATCCTGAATTTTTGCCTTAA---CATTTTCAATTGTATCAGAAGCTTCC 735
Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
||| | || || || || || || ||||| || ||||| |||||||||
Sbjct 734 ACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395743050735676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |