Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq51 152 4e-32 seq38040 111 1e-19 seq4357 86.0 5e-12 seq49094 84.2 2e-11 >seq51 Length=8754 Score = 152 bits (168), Expect = 4e-32 Identities = 94/98 (96%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 7764 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 7823 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 |||||||||||||||||||||||| ||||||| ||||| Sbjct 7824 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 7861 Score = 152 bits (168), Expect = 4e-32 Identities = 94/98 (96%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 7764 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 7823 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 |||||||||||||||||||||||| ||||||| ||||| Sbjct 7824 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 7861 Score = 82.4 bits (90), Expect = 6e-11 Identities = 50/52 (96%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 114145 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 114195 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 7702 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 7753 Score = 82.4 bits (90), Expect = 6e-11 Identities = 50/52 (96%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 115342 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 115392 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 7702 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 7753 >seq38040 Length=2861 Score = 111 bits (122), Expect = 1e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||||| || ||||||||||| || || ||| || || ||||||||||| || | Sbjct 2464 ACCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTC-GG 2522 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || || || |||| ||||||||||| || ||||| |||| || || ||||| | Sbjct 2523 AAAGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAG 2582 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATT 34075 | | || |||||||| |||||| ||||| | | || | |||| || || Sbjct 2583 GAATGCCTTCTTTGTCTTGAATTTTAGCCTTAA---CATTTTCAATTGTGTCAGAAGCTT 2639 Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | ||| | ||| ||||||||||| || |||||||| ||||| |||||||| Sbjct 2640 CAACTTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||||| ||| || || |||| ||||| ||| ||| |||||||| |||||||| | Sbjct 1780 ACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGA 1839 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 ||| || | || ||||||||||| || |||||||| || ||||| || || || Sbjct 1840 CAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGG 1899 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGC 34078 | || || || ||| ||||| ||| | ||| | | |||| | ||| Sbjct 1900 GATGCCTTCCTTATCCTGTATTTTAGCCTTCA-CATTCTCGATTGTGTCAGATGGTTCTA 1958 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | || || || ||||| || | |||||||||||| |||||||| Sbjct 1959 CTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 >seq4357 Length=5862 Score = 86.0 bits (94), Expect = 5e-12 Identities = 128/178 (72%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 37842 TGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCATG 37901 |||||| | |||||||| ||||| ||| ||||| ||||||||| | | |||||| Sbjct 4317 TGGAACTCAGCTCAAATACAGCTGGTGAAAGAGGGCAAGATGCATGGTTTCCTACGCATG 4376 Query 37902 TATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC--GCGCTCAACTACG 37959 || ||||||||||| |||||||||||| | | | || | || | || | || | | Sbjct 4377 TACTGGTGCAAGAAGATTTTGGAATGGACCCA-GTCGC-CTGAACAGGCTTTGAAATTTG 4434 Query 37960 CCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGG 38017 | ||||| | |||||| | ||||| | ||||| | ||||| || ||||| || || Sbjct 4435 CTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGATCCTAATGGTTATGTTGG 4492 >seq49094 Length=1117 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| || | ||| | || ||||||||||| ||||| |||| | Sbjct 911 CCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTGAC 852 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | | || | || || | ||||| || ||||| || || | |||||||| || Sbjct 851 AGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGGGA 792 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTCG 34077 | || |||||| ||| ||||||| ||||| | | || |||||| || ||| Sbjct 791 ATGCCCTCTTTATCCTGAATTTTTGCCTTAA---CATTTTCAATTGTATCAGAAGCTTCC 735 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||| | || || || || || || ||||| || ||||| ||||||||| Sbjct 734 ACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395743050735676