Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq22409 134 3e-26 seq38040 129 1e-24 seq49094 116 9e-21 >seq22409 Length=1756 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || ||||| | ||| ||| ||||| || || ||||| | | || ||||| || Sbjct 1451 AAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATC 1510 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 ||||| ||||| || || ||||||| ||| || || ||| || ||||| ||||| Sbjct 1511 TTCTAGCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATC 1570 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 || ||||||||||| || |||||||||| ||| | ||| || ||||| || || || Sbjct 1571 TTGAATTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGT 1630 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTCTAATAT 288489 || || || || ||||||||||| || |||||| || | | |||||| Sbjct 1631 TTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGAGACTGTAATAT 1679 >seq38040 Length=2861 Score = 129 bits (142), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||||||| || | |||||| | ||| | || |||||||||||| || ||||| | Sbjct 1552 TCCACCGCGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGA 1611 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || || || | || || || ||||| || ||||| ||||| |||||| Sbjct 1612 CAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTG---ATCTGG 1668 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || || ||||| || ||||| || ||||| || ||||| |||| || | ||| Sbjct 1669 GGGAATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTC 1728 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| || ||||| || || ||||| || || |||||||| Sbjct 1729 CACTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 1779 Score = 109 bits (120), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 ||||| | |||| ||| ||||| || ||||| || || | | ||||| || ||| Sbjct 1796 AGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCT 1855 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTA 288378 || ||||| || || || || || ||||||||||| ||| ||||| ||||| ||| Sbjct 1856 TCCAATTGCTTACCAGCAAATATGAGACGCTGTTG---GTCTGGGGGGATGCCTTCCTTA 1912 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 ||||| ||||| || ||||| || || || | || | ||||||||| || || || Sbjct 1913 TCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATG 1972 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || |||| || || || ||||| ||||| Sbjct 1973 GTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 >seq49094 Length=1117 Score = 116 bits (128), Expect = 9e-21 Identities = 144/196 (73%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||| ||||| | || |||||||| ||||| | || ||||| || || Sbjct 420 TTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAA 361 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || || | |||||| |||||| || || ||||||||||| ||||| || || || Sbjct 360 AATAAGTCTTTGTTGA---TCTGGGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAAC 304 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | ||| | ||| ||||| || ||||| ||||| || ||||| ||||| Sbjct 303 ATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTT 244 Query 288459 GACGAATATCTGCATT 288474 || || || |||||| Sbjct 243 TACAAAAATTTGCATT 228 Score = 109 bits (120), Expect = 1e-18 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || |||||||| || | ||||| || || ||||||| ||||||||||| || Sbjct 648 TTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCTTCTAGCTGTTTTCCTGCAAA 589 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | |||||| || || |||||||| || || ||||| || || || || Sbjct 588 AATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTGTCTTGAATTTTTGCCTTAACATT 529 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 |||||| | ||| | ||| ||||| | || ||||| || || ||||| ||||| || Sbjct 528 TTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATCGTTTTGCCAGTCAGTGTCTTTAC 469 Query 288462 GAATATCTGCATT 288474 || || |||||| Sbjct 468 AAAAATTTGCATT 456 Score = 109 bits (120), Expect = 1e-18 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || | ||||| | ||| | || ||| || || ||||| ||||| | Sbjct 912 TCCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTGA 853 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || ||||| ||||| | || ||||| || || || || | || ||| ||||| Sbjct 852 CAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGA---TCTGG 796 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || || ||||||||||| ||||| || || || ||||| || | ||| | ||| Sbjct 795 GGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTC 736 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || ||||| ||||| || ||||| ||||| || || || |||||| Sbjct 735 CACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 684 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||||||||| | || |||||||| ||||| | ||| ||||| ||||| Sbjct 192 TTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAA 133 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || | | ||||| |||| || || ||||| || || || || || || || || Sbjct 132 AATTAATCTTTGTTG---ATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTAC 76 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | ||| | ||| ||||| | ||||| || || |||||||| || || Sbjct 75 GTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCGGTCAGTGTTTT 16 Query 288459 GACGAATATCTGCAT 288473 || || || ||||| Sbjct 15 AACAAAAATTTGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175533661478564