Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq100749 87.8 1e-12 >seq100749 Length=1928 Score = 87.8 bits (96), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 108784 AACTTTACGTGGCTGGTCAATTCGGCGGCGCACATGTACGGCGACCGTCCGTTCGACAAG 108843 ||| | |||||||| || || || || || |||| | |||||| |||| ||| || Sbjct 1064 AACGTCACGTGGCTCGTGAACTCTGCTGCTCACAAATGGGGCGACAAACCGTACGATAAA 1005 Query 108844 AACATTTTCCCAAGAGAAAACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCAC 108903 || ||| || ||||||| | || ||| || ||||||||||| || | ||| Sbjct 1004 AATATTCAACCTTCTGAAAACATCTCCGTCTCGGTATTTGCTCTCGGCGAAGGTTTCCAC 945 Query 108904 AACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTGGGGAACGAC---TTT 108960 |||||||||||| |||||| | ||||| || | || ||| |||| ||| || || Sbjct 944 AACTACCACCACACGTTCCCGTGGGACTATAAAACAGCTGAGCTGGGAAACAACAGACTT 885 Query 108961 AATTTCACC 108969 ||||||||| Sbjct 884 AATTTCACC 876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380504254645872