Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq38040 132 3e-26 seq22409 123 2e-23 seq49094 104 2e-17 >seq38040 Length=2861 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||||||| | | || | || ||||| || |||||||| |||||||| ||| Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | ||||||| ||||| || ||||| | |||||||| ||||| || ||| Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| |||||| || ||| |||| || || || | ||| || Sbjct 2585 ATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACT 2644 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| ||||| ||||| ||||| || ||||| ||||||||||||||| Sbjct 2645 TCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCATA 2692 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||||| | | || || |||||||| || ||||| || || |||||||| Sbjct 1781 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGAC 1840 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | | ||||| ||||| || ||||| |||| | |||||||||||| || Sbjct 1841 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGG 1900 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || |||||||| || ||||| || ||| | || || || || |||||| Sbjct 1901 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 1960 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||||||| || ||||||| ||||| ||||| ||||||||| Sbjct 1961 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCATA 2008 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||||||| | | |||| ||||||||||| |||||||| || ||||| || Sbjct 2237 CCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGAT 2296 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| ||||| || ||||| | || | ||| ||||| || || Sbjct 2297 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGG 2356 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| ||||| |||||| |||| || || || || || Sbjct 2357 ATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGATGGCTCCACC 2416 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| || ||||| || ||||| || || || ||||| ||||||||| Sbjct 2417 TCTAGAGTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCATA 2464 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 |||||||||| | || || | |||||||||||| || ||||| |||||||| || | | Sbjct 2009 CCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAT 2068 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | | | ||||| || || ||||| || | || | ||| ||||| || || Sbjct 2069 AAG-GTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGG 2127 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||| || || || || ||| || ||||| |||| || ||||| || || Sbjct 2128 AATACCCTCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTATCAGATGGCTCCAC 2187 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| || || || || ||||| || || || ||||| ||||||||| Sbjct 2188 CTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCATA 2236 >seq22409 Length=1756 Score = 123 bits (136), Expect = 2e-23 Identities = 148/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATTGTTTGC 15037 || || || ||||| |||||||| || || ||| || | ||||||| ||||| | Sbjct 1467 GTGGATTCCTTTTGAATGTTGTAGTCA--GACAATGTACGTCCATCTTCTAGCTGTTTAC 1524 Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTT 15097 |||| | |||||||| || ||||| |||||| |||||||| || |||||| || Sbjct 1525 CAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTCGCTT 1584 Query 15098 TTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAG 15157 ||||| ||||||||||||| ||| || || | ||||||||||||||| || || | Sbjct 1585 TTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGG 1644 Query 15158 TTTTTACAAAAATTTGCAT 15176 | || || ||||||||||| Sbjct 1645 TCTTGACGAAAATTTGCAT 1663 >seq49094 Length=1117 Score = 104 bits (114), Expect = 2e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 14972 AATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATT 15031 |||| | ||||| || || || ||||| || || || | | | | ||||| | || Sbjct 1117 AATGCAAAGTAGATTCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTT 1058 Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-T 15090 | || |||||| | ||||| | |||||||| || || ||||||||||| ||| | Sbjct 1057 GCTTTCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCT 998 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 |||| || ||| |||| || || || | ||| || ||||| ||||| |||||||| Sbjct 997 TTGCCTTA-ACATTTTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCA 939 Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| ||||| || ||||||||||| Sbjct 938 GTCAGTGTTTTAACGAAAATTTGCAT 913 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||||| ||||| || || | || | | |||||||||| ||||| ||||| ||| Sbjct 611 TCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTG 552 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || |||||| || ||| ||||||| ||||| | ||| || || || ||||| Sbjct 551 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATC 492 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| || ||||||||||||||||| Sbjct 491 GTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356204466573830