Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq51813 154 1e-32 seq49094 113 4e-20 seq98588 105 6e-18 seq38040 95.1 1e-14 seq89394 86.0 6e-12 >seq51813 Length=3444 Score = 154 bits (170), Expect = 1e-32 Identities = 367/545 (67%), Gaps = 16/545 (3%) Strand=Plus/Minus Query 22274 GAAAACAACAAGCGTTTCAAG-ACGCATCCTAATAAAATTGTCGCCGGCTATTTTGTCGA 22332 ||||| || |||| |||||| | |||| | ||| |||| | || ||| || || || Sbjct 1375 GAAAAAAATAAGCCATTCAAGCAAACATCTGGA-AAAGTTGTGGGCGCCTACTTCGTAGA 1317 Query 22333 GTGGGGAGTGTACCTTCGCCAGTTTCCCGCCGACAAGGTGCCCGTGCCGAACCTGTCGCA 22392 ||||| || || | | | |||| |||| || | || | || || || | || Sbjct 1316 ATGGGGTGTCTATCCTAGAAAGTTCCCCGTGGATCGTATACCTATACCTAATCTTACTCA 1257 Query 22393 TTTGCTCTACGGTTTCGTGCCAATATGCGGCGGAGACGGCATCAACGACGCCCTGAAAAC 22452 ||||||||| || || | || || |||||||| |||||||| || ||| | | ||| Sbjct 1256 TTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAATGACAGCTTAAAAGA 1197 Query 22453 GGTGCCGGGAAGCTTCGAGGCGTTGCAACGGTCGTG---CGTCAATAGAGCCGATTTCAA 22509 | | || || ||| | || |||||||||| || || | | ||| || || || Sbjct 1196 GATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCGT-GAG--GACTTTAA 1140 Query 22510 GGTGACCATACACGATCCGTGGGCGGCCGTACAAAAACCTCAAAAAGGCGTGTCGTCGTG 22569 || | || |||||||| ||||| || |||||||||| |||||||| |||| || || Sbjct 1139 AGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATG 1080 Query 22570 GAACGAACCGTACAAAGGCAACTTTGGTCAATTGATGGCAGTGAAAAGAGCGAATCCTCA 22629 |||||| || |||||||||||||| || ||||| ||| || | ||| ||| || | Sbjct 1079 GAACGAGCCCTACAAAGGCAACTTCGGCCAATTAATGTCACTAAAACAAGCCCGCCCGGA 1020 Query 22630 TCTCAAAGTGTTAGCATCGATCGGCGGATGGACGTTGTCCGATCCGTTTTATCATATGCA 22689 | || | | | || || || || |||||| | ||||||| |||| || | | | Sbjct 1019 ATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCC-TTTTTTC-TTTTTA 962 Query 22690 CGACAAGAACGTGAGACAA----ATTTTCATCGATTCGGTGGAAGAGTATTTGATCACGT 22745 | || | ||| || |||| | | || || | |||| | | | || | Sbjct 961 GTTGATAAATCTAAGAGAACACGATTT--GTGCAGTCAGTAAAGGAGTTTCTTCTAACAT 904 Query 22746 GGAAGTTCTTTGACGGCGTCGATATTGATTGGGAGTTTCCCGGCGGCAAGGGGGCGAATC 22805 |||| ||||| || || || ||||| |||||||||||||| || ||||| || || || | Sbjct 903 GGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGCAAAGGTGCTAACC 844 Query 22806 CTAAC 22810 || || Sbjct 843 CTGAC 839 >seq49094 Length=1117 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||| || | || || || || |||||||| ||||| || ||| ||| | Sbjct 671 CGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCA 612 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || |||||||||||||| || | || | | ||| || |||||||| || || || ||| Sbjct 611 TCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTG 552 Query 127019 TCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || ||| ||| ||| || | | ||| | || || | | || ||||| | || | Sbjct 551 TCT-TGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAAT 493 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||||| ||||| || ||||||||||| ||||| Sbjct 492 CGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 457 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | | || | |||||| || | || || || || |||||||| || || Sbjct 228 TCCACCCCTAAGGCGTAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGA 169 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || ||||| ||| || || || ||||| ||| | || |||| || ||||| ||||| Sbjct 168 CAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAGG 109 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||| |||||||| ||| | | ||| || | | |||| || || | | || | Sbjct 108 AATGCCTTCCTTGTCT-TGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCA 50 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | || | |||||||||||||| ||||| |||||||| ||||| Sbjct 49 CTTCCAATGTGATAGTTTTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | | |||| || ||||| | ||||| || || ||||||||||| || Sbjct 912 TCCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTGA 853 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || || ||| || ||||| |||||||| | || | || |||||||| || || Sbjct 852 CAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGGG 793 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 |||||||| || ||| ||| ||| ||| || | | ||| | || || | | || | Sbjct 792 AATGCCCTCTTTATCC-TGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 734 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | || | || ||||| ||||| || ||||||||||| ||||| Sbjct 733 CTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 685 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || ||||||||||| || | ||||| ||| || ||||| |||||| Sbjct 425 GTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCA 366 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || | || | || || ||||| || || |||||||| || ||| ||| ||| ||| || Sbjct 365 GCAAAAATAAGTCTTTGTTGATCTGGGGGAATGCCCTCTTTATCC-TGAATTTTTGCCTT 307 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | ||| | || || | | || ||||| | || | || ||||| ||||| || Sbjct 306 AACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTCTTGCCTGTCAGTGT 247 Query 127096 TTTTACAAAAATCTGCAT 127113 ||||||||||| ||||| Sbjct 246 CTTTACAAAAATTTGCAT 229 >seq98588 Length=355 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||||| ||||| || | ||||| ||||||||||| ||||| ||| Sbjct 341 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGA 282 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| ||| || | || || ||||| |||| | ||||||||||| || || Sbjct 281 AAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 222 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 |||||||| ||||| |||||| || | | ||| | || || | || || Sbjct 221 GATGCCCTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCAC 162 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || || || || || ||||| |||||||||||||| Sbjct 161 TTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq38040 Length=2861 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || || |||| ||||| || | || || ||||||||||| ||||| ||| Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || | || |||||||| | ||||| || || ||||| ||||| Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| || ||||| ||||| ||| | | ||| | ||||| | | || ||| Sbjct 2585 ATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACT 2644 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || || || ||||| |||||||| ||||| Sbjct 2645 TCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || |||||||| |||||||||||||| || |||||| ||| || Sbjct 1799 ACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCC 1858 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | || || ||||| | || | ||||| || || || || ||||| ||||| ||| Sbjct 1859 AATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGT 1918 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| ||| | | |||| ||||| | || ||||| | ||| | || || Sbjct 1919 ATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTT 1978 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| ||||| ||||| || ||||| Sbjct 1979 CCTGTCAATGTTTTCACAAATATTTGCAT 2007 >seq89394 Length=1369 Score = 86.0 bits (94), Expect = 6e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 114467 CGGCTTCTGTTACATTGGTCGCGGCGACGAAGTCCGCTGCGCCTTTTGCAAGGTCGAAAT 114526 |||||||| |||| | || |||||||| ||||| |||||||| ||||| || || ||||| Sbjct 396 CGGCTTCTATTACCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAAT 455 Query 114527 TATGAATTGGAAACGAGGAGACGATCCGCTCGTCGATCACAAGAGATGGGCGCCTCAATG 114586 |||||| ||| | || |||||||| | || ||| | | |||||||| ||||| Sbjct 456 TATGAAATGGGTAGCGGGCGACGATCCCGCCAAGGACCACCAACGGTGGGCGCCCCAATG 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473880305161120