Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_011802.1
Length=41941
Score E
Sequences producing significant alignments: (Bits) Value
seq271029 455 9e-124
seq249728 224 3e-54
seq177630 150 5e-32
seq262377 116 1e-21
seq272380 98.7 3e-16
>seq271029
Length=527
Score = 455 bits (504), Expect = 9e-124
Identities = 426/544 (78%), Gaps = 20/544 (4%)
Strand=Plus/Plus
Query 25696 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 25755
|||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | |
Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60
Query 25756 AGAATCCCAGTAAGTCGCAGAAAGTGGTCAACATGACCATCTATGATGCTGAGCACTACA 25815
|||| || || ||| |||||| |||||||| |||||||||||||| || || |||||||
Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120
Query 25816 CCGACGAGCAGAAAGAGCAAATCATAGCATCCTATCCTGAGCATGAGAGAGAGGCACGTG 25875
||||||||||||||||||||||||| || || ||||||||||||||| | || || ||||
Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180
Query 25876 CTCGTGGTATTCCTACGATGGGTAGCGGTCGAATATTCCAGATACCGGAAGAGACGATTA 25935
| || ||||| || || |||||||||||| | || | ||| ||||| ||||| || || |
Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240
Query 25936 AGTGCCAGCCGTTTGAGTGTCCCGATCACTTCTATGTTATCGACGCTCAGGACTTCGGCT 25995
|||||||||||||||| ||||||||||||||||| |||||||||| || ||||| ||||
Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300
Query 25996 GGAACCACCCGCAAGCTCACATTCAGCTTTGGTGGGACAAAGACGCAGATGTTTTCTATC 26055
|||| ||||||||| |||| |||| ||||| || |||||||
Sbjct 301 GGAATCACCCGCAA--TCAC------------NNGGACGAAGAC------GTCTTCTATC 340
Query 26056 TGGCGCGTGTATGGAAGAAATCAGAGAACACTGCCGTTCAGGCATGGGGTGCTGTTAAGT 26115
| || || || ||||||||||| ||||||||||| || ||||| ||||| ||| |||||
Sbjct 341 TTGCTCGAGTGTGGAAGAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTAAGT 400
Query 26116 CGTGGGCTAACAAAATACCTGTCGCGTGGCCTCATGACGGTCACCAACACGAAAAGGGCG 26175
| ||| | ||||| |||||||| || |||||||| || || ||||||||||| || ||||
Sbjct 401 CATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAGGCG 460
Query 26176 GTGGTGAGCAACTTAAAACCCAATATGCGGATGCCGGGTTCTCTATGCTTCCCGATCACG 26235
| |||||||| || || | ||||| || || || || ||| ||| | || || || |
Sbjct 461 GCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGCATG 520
Query 26236 CAAC 26239
| ||
Sbjct 521 CCAC 524
>seq249728
Length=458
Score = 224 bits (248), Expect = 3e-54
Identities = 329/464 (71%), Gaps = 25/464 (5%)
Strand=Plus/Minus
Query 27065 CAGAATGGTTGGGAGGATTTCGCAGAAAAATACGACCTCGATGCTGATGATATTCCATCA 27124
||| ||||||||||| ||||| ||| |||| | ||||| | || || | ||
Sbjct 441 CAGGATGGTTGGGAGTCATTCGCTGAAGAATATGGACTCGACCCAGACGAAAAGCCTAGC 382
Query 27125 TTCCAGAACCCCAACGATTGGGTATTTCCATGGCTGACGCAGGA-CACAATTCAGATCGC 27183
|| || ||||||||||||||||| || |||||||| ||| | | | | | |||||
Sbjct 381 TTTCAATCTCCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGC 323
Query 27184 TGAGTTTTACGAAGTGGTCGAGAAGAAAGAGACGGCGTTTATCTACCAAGACCCGGTTAC 27243
||||| ||||||||| | |||||||||||| || | |||||| | |||||| | ||
Sbjct 322 TGAGTATTACGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAAC 263
Query 27244 GGGTGAGCCGGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATCGACGACCTGGCTGA 27303
|||||||| || |||||||| |||||| || | |||||
Sbjct 262 CGGTGAGCCAGTTAGCTACTTCAAGCGCATGCTT------------GCCGACC------- 222
Query 27304 TAGTGGATTTATCAAAATTGCAGAGCGCCAGATTAAGCGTCGCCGGGTATACAAATCGAT 27363
|||| | | || |||| ||| ||||||| || ||| |||| || ||| ||||
Sbjct 221 --GTGGCATGAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGAT 164
Query 27364 TATCACCTGCACTGCTGTACTCAAAGACAAGCAGCTC-ATTGCTGGCGAACATATCCCAA 27422
| |||| | | || ||| | |||||| ||| | || || || || ||| | || |
Sbjct 163 TCTCACATCTTCCGCAGTATTGAAAGACC-GCACATTGATAGCCGGTGAGCATCTGCCGA 105
Query 27423 TTGTTCCGGTATTCGGCGAGTGGGGCTTCGTTGAAGATAAAGAAGTGTATGAGGGGGTCG 27482
|||| || || |||||||||||||| ||||| || ||||||||||| |||||||| |||
Sbjct 104 TTGTGCCAGTGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCG 45
Query 27483 TCCGCCTGACAAAAGACGGTCAGCGTCTGCGCAACATGATTATG 27526
| | ||||| |||||||| ||||| ||||||||||||||||||
Sbjct 44 TTAGGCTGACGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1
>seq177630
Length=801
Score = 150 bits (166), Expect = 5e-32
Identities = 252/366 (69%), Gaps = 19/366 (5%)
Strand=Plus/Plus
Query 30590 CCTGAGCAACGCGCCTACGCCAACGTTAACACCTCACTGGCTGATGCAATGGCGGTGAAC 30649
|| ||| ||||| | || |||||||| ||||| | || |||||| | ||| | |||
Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60
Query 30650 ATCCTGAACGTT--AAGGATGCCCGTACTAACGTGTTCTGGGCTGATGACGCCATCCGTA 30707
||| ||||||| || | || |||||||| |||||||| ||||| | |||||||
Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118
Query 30708 TTGTGTCTCAGCCGATTCCGGCCAACCATGAGCTTTTTGCAGGTATGAAAACTACCTCAT 30767
| ||||||||||| |||||||||||| ||| || ||||| || |||||||| || ||
Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGACTTCGN 178
Query 30768 TCAGCATCCCGGATGTCGGCCTGAACGGTATCTTCCGTACGCAGGGGGATATTTCCACCC 30827
| | || || || ||||| || || | |||
Sbjct 179 NNNNNNNNNNNNNNNNNNNTC---ATGG-------CG-ACTCAGGGCGACATCGCAACCT 227
Query 30828 TGTTCCGCCTGTGCCGTATTGCGCTGTGGTACGGCGTAAACGCGACACGACCGGAAGCAA 30887
|| | | ||||||||||| |||||||| ||||| ||||| || || || |||||||
Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287
Query 30888 TCGGTGTTGGCCTGCCTGGTCAGACTGCGTAACTAA--CAGCTTCGGCCCCTTTCTTATT 30945
|||| || ||||| ||||||| || || ||| || ||||||||||||| || ||
Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAATCAATGGGGCTTCGGCCCCTT--TTCTT 345
Query 30946 TGAGGT 30951
||||||
Sbjct 346 TGAGGT 351
Score = 143 bits (158), Expect = 7e-30
Identities = 203/284 (71%), Gaps = 1/284 (0%)
Strand=Plus/Plus
Query 31480 CAAAGCCTAAGGCGGAAAGCGATGCAGATAAAGACTAAAGGCGATCTGGTCAGGGCGGCG 31539
||||||| |||| || | |||||| || |||| || || || | || | |||||
Sbjct 508 CAAAGCC-AAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCGGCA 566
Query 31540 CTGCGTACAGTTGGTGTAGCATCAGATGCAACTCTCACTGATGTTGAGCCACAGTCTATG 31599
||||| | | ||| | || || || || || || |||||||| |||||||| || |||
Sbjct 567 CTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCAATG 626
Query 31600 CAGGATGCCGTAGATGACCTTGAAGCGATGATGGCTGAGTGGTATCAGGACGGGAAAGGC 31659
|||| | ||| | ||||| ||| |||||||||||| |||||||||||||| |||
Sbjct 627 GAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGAGGG 686
Query 31660 ATTGTTACCGGGTATGTATTATCAGATGATGATAACCCGCCAGCCGAAGGTGACGACCAC 31719
||| | || || || | || | |||| || | || || || |||||||||||||||
Sbjct 687 ATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGACCAC 746
Query 31720 GGTCTTCGCTCAAGCGCAATCAGCGCAGTATTCCACAATCTGGC 31763
| || || ||| | || ||||||||| |||| || || ||
Sbjct 747 TCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGC 790
>seq262377
Length=537
Score = 116 bits (128), Expect = 1e-21
Identities = 227/329 (69%), Gaps = 6/329 (2%)
Strand=Plus/Plus
Query 32837 ATGGAGGCGTTGAGGCTCGATTCGCATGAACTGCTGATTATCCATCTCCCGCGTCATGTG 32896
|||||| | || | ||||| || || || | || ||||| || ||| | ||||
Sbjct 210 ATGGAGTCCTTACGATTCGATGGTCACGAGCTAATCATCATCCACCTACCGAATGATGTA 269
Query 32897 CTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCGTACTGAAAACAGGT 32956
|| || || |||||| |||| |||||||| |||||||||| | |||||||| ||
Sbjct 270 CTTTGCTATGACGCCTCAGCAAGTCAGAACGGTCCGCAATGGTCAATCCTGAAAACTGGA 329
Query 32957 TTATACGACGATGTTTATCGCGCCATCGACTTCATGTACGAAGGCAACCAGATAACGTGC 33016
| || || | |||| || |||||||||||||| || || |||||||| || |||
Sbjct 330 CTCTATGATACTCCGCATCGTGCTATCGACTTCATGTATGAGGGTAACCAGATTACCTGC 389
Query 33017 GGCGATAAATCAGAAGCAGTGACAGGGCAGTTGCAATTCGACATTAGTAGT--CAGTACG 33074
|| || || | || | ||||| ||| | | |||| | | | | | |||||||
Sbjct 390 GGAGACAAGACGCAATCTGTGACCGGGTA-TCTTAATTATGC-TCACTCATCACAGTACG 447
Query 33075 ACAAGCAGCAAGAACATCTGCTGTTTACTCCCATCTTCAAGGCTGATAAC-GCCAGATGC 33133
|| |||||||||| || || | || || | ||||||||||||||| || |||
Sbjct 448 ACGCAGAGCAAGAACACCTTCTCTACACGCCACTTTTCAAGGCTGATAACAACCTGAT-A 506
Query 33134 TTCGATCTGGAAGTTGAATCCTCGACAGG 33162
|||||| | ||| | ||| | || |||||
Sbjct 507 TTCGATTTCGAATTAGAAGCATCAACAGG 535
>seq272380
Length=445
Score = 98.7 bits (108), Expect = 3e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39519 TTCAGCGTATCAAACACCATCTTCTTAACAAGTTCGGACTGCTCATCAGCAATGCGCTCT 39578
|| || || || || ||||||| ||||| || || || |||||||| | | ||
Sbjct 246 TTAAGTGTTTCGAAAACCATCTCTTTAACCTTGTCCGATTGTTCATCAGCTAGTCTTTCA 187
Query 39579 GCTTCGTCGCGATAACCTGATACTGGAGATGGTTTAGATATAGCTTCGGTAACTATCTGC 39638
|||||||| ||||| || || || ||||||||||| | |||||| || || ||||||
Sbjct 186 GCTTCGTCACGATAGCCAGAGACAGGAGATGGTTTTGCTATAGCATCTTGGACAATCTGC 127
Query 39639 ACTAATTCAGCATTCAGTGAGCGGCCATTCGATTTAGCTCGCTGTTTCAGCTTTTCCTTT 39698
| || ||||| |||| ||| || || || | | || || ||| || ||||| |
Sbjct 126 AGTAGCTCAGCGTTCATTGAACGTCCGTTTGCCTCTGCGCGGAATTTGAGTTTTTCTCTG 67
Query 39699 AATTCGTAAGGTAGCCGCAGATTAAATTGCGGGTCATCTCTTCCCAT 39745
| ||| ||| | | | ||||| || |||||||||||| ||||
Sbjct 66 ACTTCAAGAGGCATTCTGAAGTTAAAGTGTGGGTCATCTCTTGCCAT 20
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133655474695668
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |