Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_011802.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq271029 455 9e-124 seq249728 224 3e-54 seq177630 150 5e-32 seq262377 116 1e-21 seq272380 98.7 3e-16 >seq271029 Length=527 Score = 455 bits (504), Expect = 9e-124 Identities = 426/544 (78%), Gaps = 20/544 (4%) Strand=Plus/Plus Query 25696 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 25755 |||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | | Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60 Query 25756 AGAATCCCAGTAAGTCGCAGAAAGTGGTCAACATGACCATCTATGATGCTGAGCACTACA 25815 |||| || || ||| |||||| |||||||| |||||||||||||| || || ||||||| Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120 Query 25816 CCGACGAGCAGAAAGAGCAAATCATAGCATCCTATCCTGAGCATGAGAGAGAGGCACGTG 25875 ||||||||||||||||||||||||| || || ||||||||||||||| | || || |||| Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180 Query 25876 CTCGTGGTATTCCTACGATGGGTAGCGGTCGAATATTCCAGATACCGGAAGAGACGATTA 25935 | || ||||| || || |||||||||||| | || | ||| ||||| ||||| || || | Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240 Query 25936 AGTGCCAGCCGTTTGAGTGTCCCGATCACTTCTATGTTATCGACGCTCAGGACTTCGGCT 25995 |||||||||||||||| ||||||||||||||||| |||||||||| || ||||| |||| Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300 Query 25996 GGAACCACCCGCAAGCTCACATTCAGCTTTGGTGGGACAAAGACGCAGATGTTTTCTATC 26055 |||| ||||||||| |||| |||| ||||| || ||||||| Sbjct 301 GGAATCACCCGCAA--TCAC------------NNGGACGAAGAC------GTCTTCTATC 340 Query 26056 TGGCGCGTGTATGGAAGAAATCAGAGAACACTGCCGTTCAGGCATGGGGTGCTGTTAAGT 26115 | || || || ||||||||||| ||||||||||| || ||||| ||||| ||| ||||| Sbjct 341 TTGCTCGAGTGTGGAAGAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTAAGT 400 Query 26116 CGTGGGCTAACAAAATACCTGTCGCGTGGCCTCATGACGGTCACCAACACGAAAAGGGCG 26175 | ||| | ||||| |||||||| || |||||||| || || ||||||||||| || |||| Sbjct 401 CATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAGGCG 460 Query 26176 GTGGTGAGCAACTTAAAACCCAATATGCGGATGCCGGGTTCTCTATGCTTCCCGATCACG 26235 | |||||||| || || | ||||| || || || || ||| ||| | || || || | Sbjct 461 GCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGCATG 520 Query 26236 CAAC 26239 | || Sbjct 521 CCAC 524 >seq249728 Length=458 Score = 224 bits (248), Expect = 3e-54 Identities = 329/464 (71%), Gaps = 25/464 (5%) Strand=Plus/Minus Query 27065 CAGAATGGTTGGGAGGATTTCGCAGAAAAATACGACCTCGATGCTGATGATATTCCATCA 27124 ||| ||||||||||| ||||| ||| |||| | ||||| | || || | || Sbjct 441 CAGGATGGTTGGGAGTCATTCGCTGAAGAATATGGACTCGACCCAGACGAAAAGCCTAGC 382 Query 27125 TTCCAGAACCCCAACGATTGGGTATTTCCATGGCTGACGCAGGA-CACAATTCAGATCGC 27183 || || ||||||||||||||||| || |||||||| ||| | | | | | ||||| Sbjct 381 TTTCAATCTCCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGC 323 Query 27184 TGAGTTTTACGAAGTGGTCGAGAAGAAAGAGACGGCGTTTATCTACCAAGACCCGGTTAC 27243 ||||| ||||||||| | |||||||||||| || | |||||| | |||||| | || Sbjct 322 TGAGTATTACGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAAC 263 Query 27244 GGGTGAGCCGGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATCGACGACCTGGCTGA 27303 |||||||| || |||||||| |||||| || | ||||| Sbjct 262 CGGTGAGCCAGTTAGCTACTTCAAGCGCATGCTT------------GCCGACC------- 222 Query 27304 TAGTGGATTTATCAAAATTGCAGAGCGCCAGATTAAGCGTCGCCGGGTATACAAATCGAT 27363 |||| | | || |||| ||| ||||||| || ||| |||| || ||| |||| Sbjct 221 --GTGGCATGAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGAT 164 Query 27364 TATCACCTGCACTGCTGTACTCAAAGACAAGCAGCTC-ATTGCTGGCGAACATATCCCAA 27422 | |||| | | || ||| | |||||| ||| | || || || || ||| | || | Sbjct 163 TCTCACATCTTCCGCAGTATTGAAAGACC-GCACATTGATAGCCGGTGAGCATCTGCCGA 105 Query 27423 TTGTTCCGGTATTCGGCGAGTGGGGCTTCGTTGAAGATAAAGAAGTGTATGAGGGGGTCG 27482 |||| || || |||||||||||||| ||||| || ||||||||||| |||||||| ||| Sbjct 104 TTGTGCCAGTGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCG 45 Query 27483 TCCGCCTGACAAAAGACGGTCAGCGTCTGCGCAACATGATTATG 27526 | | ||||| |||||||| ||||| |||||||||||||||||| Sbjct 44 TTAGGCTGACGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1 >seq177630 Length=801 Score = 150 bits (166), Expect = 5e-32 Identities = 252/366 (69%), Gaps = 19/366 (5%) Strand=Plus/Plus Query 30590 CCTGAGCAACGCGCCTACGCCAACGTTAACACCTCACTGGCTGATGCAATGGCGGTGAAC 30649 || ||| ||||| | || |||||||| ||||| | || |||||| | ||| | ||| Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60 Query 30650 ATCCTGAACGTT--AAGGATGCCCGTACTAACGTGTTCTGGGCTGATGACGCCATCCGTA 30707 ||| ||||||| || | || |||||||| |||||||| ||||| | ||||||| Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118 Query 30708 TTGTGTCTCAGCCGATTCCGGCCAACCATGAGCTTTTTGCAGGTATGAAAACTACCTCAT 30767 | ||||||||||| |||||||||||| ||| || ||||| || |||||||| || || Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGACTTCGN 178 Query 30768 TCAGCATCCCGGATGTCGGCCTGAACGGTATCTTCCGTACGCAGGGGGATATTTCCACCC 30827 | | || || || ||||| || || | ||| Sbjct 179 NNNNNNNNNNNNNNNNNNNTC---ATGG-------CG-ACTCAGGGCGACATCGCAACCT 227 Query 30828 TGTTCCGCCTGTGCCGTATTGCGCTGTGGTACGGCGTAAACGCGACACGACCGGAAGCAA 30887 || | | ||||||||||| |||||||| ||||| ||||| || || || ||||||| Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287 Query 30888 TCGGTGTTGGCCTGCCTGGTCAGACTGCGTAACTAA--CAGCTTCGGCCCCTTTCTTATT 30945 |||| || ||||| ||||||| || || ||| || ||||||||||||| || || Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAATCAATGGGGCTTCGGCCCCTT--TTCTT 345 Query 30946 TGAGGT 30951 |||||| Sbjct 346 TGAGGT 351 Score = 143 bits (158), Expect = 7e-30 Identities = 203/284 (71%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 31480 CAAAGCCTAAGGCGGAAAGCGATGCAGATAAAGACTAAAGGCGATCTGGTCAGGGCGGCG 31539 ||||||| |||| || | |||||| || |||| || || || | || | ||||| Sbjct 508 CAAAGCC-AAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCGGCA 566 Query 31540 CTGCGTACAGTTGGTGTAGCATCAGATGCAACTCTCACTGATGTTGAGCCACAGTCTATG 31599 ||||| | | ||| | || || || || || || |||||||| |||||||| || ||| Sbjct 567 CTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCAATG 626 Query 31600 CAGGATGCCGTAGATGACCTTGAAGCGATGATGGCTGAGTGGTATCAGGACGGGAAAGGC 31659 |||| | ||| | ||||| ||| |||||||||||| |||||||||||||| ||| Sbjct 627 GAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGAGGG 686 Query 31660 ATTGTTACCGGGTATGTATTATCAGATGATGATAACCCGCCAGCCGAAGGTGACGACCAC 31719 ||| | || || || | || | |||| || | || || || ||||||||||||||| Sbjct 687 ATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGACCAC 746 Query 31720 GGTCTTCGCTCAAGCGCAATCAGCGCAGTATTCCACAATCTGGC 31763 | || || ||| | || ||||||||| |||| || || || Sbjct 747 TCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGC 790 >seq262377 Length=537 Score = 116 bits (128), Expect = 1e-21 Identities = 227/329 (69%), Gaps = 6/329 (2%) Strand=Plus/Plus Query 32837 ATGGAGGCGTTGAGGCTCGATTCGCATGAACTGCTGATTATCCATCTCCCGCGTCATGTG 32896 |||||| | || | ||||| || || || | || ||||| || ||| | |||| Sbjct 210 ATGGAGTCCTTACGATTCGATGGTCACGAGCTAATCATCATCCACCTACCGAATGATGTA 269 Query 32897 CTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCGTACTGAAAACAGGT 32956 || || || |||||| |||| |||||||| |||||||||| | |||||||| || Sbjct 270 CTTTGCTATGACGCCTCAGCAAGTCAGAACGGTCCGCAATGGTCAATCCTGAAAACTGGA 329 Query 32957 TTATACGACGATGTTTATCGCGCCATCGACTTCATGTACGAAGGCAACCAGATAACGTGC 33016 | || || | |||| || |||||||||||||| || || |||||||| || ||| Sbjct 330 CTCTATGATACTCCGCATCGTGCTATCGACTTCATGTATGAGGGTAACCAGATTACCTGC 389 Query 33017 GGCGATAAATCAGAAGCAGTGACAGGGCAGTTGCAATTCGACATTAGTAGT--CAGTACG 33074 || || || | || | ||||| ||| | | |||| | | | | | ||||||| Sbjct 390 GGAGACAAGACGCAATCTGTGACCGGGTA-TCTTAATTATGC-TCACTCATCACAGTACG 447 Query 33075 ACAAGCAGCAAGAACATCTGCTGTTTACTCCCATCTTCAAGGCTGATAAC-GCCAGATGC 33133 || |||||||||| || || | || || | ||||||||||||||| || ||| Sbjct 448 ACGCAGAGCAAGAACACCTTCTCTACACGCCACTTTTCAAGGCTGATAACAACCTGAT-A 506 Query 33134 TTCGATCTGGAAGTTGAATCCTCGACAGG 33162 |||||| | ||| | ||| | || ||||| Sbjct 507 TTCGATTTCGAATTAGAAGCATCAACAGG 535 >seq272380 Length=445 Score = 98.7 bits (108), Expect = 3e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39519 TTCAGCGTATCAAACACCATCTTCTTAACAAGTTCGGACTGCTCATCAGCAATGCGCTCT 39578 || || || || || ||||||| ||||| || || || |||||||| | | || Sbjct 246 TTAAGTGTTTCGAAAACCATCTCTTTAACCTTGTCCGATTGTTCATCAGCTAGTCTTTCA 187 Query 39579 GCTTCGTCGCGATAACCTGATACTGGAGATGGTTTAGATATAGCTTCGGTAACTATCTGC 39638 |||||||| ||||| || || || ||||||||||| | |||||| || || |||||| Sbjct 186 GCTTCGTCACGATAGCCAGAGACAGGAGATGGTTTTGCTATAGCATCTTGGACAATCTGC 127 Query 39639 ACTAATTCAGCATTCAGTGAGCGGCCATTCGATTTAGCTCGCTGTTTCAGCTTTTCCTTT 39698 | || ||||| |||| ||| || || || | | || || ||| || ||||| | Sbjct 126 AGTAGCTCAGCGTTCATTGAACGTCCGTTTGCCTCTGCGCGGAATTTGAGTTTTTCTCTG 67 Query 39699 AATTCGTAAGGTAGCCGCAGATTAAATTGCGGGTCATCTCTTCCCAT 39745 | ||| ||| | | | ||||| || |||||||||||| |||| Sbjct 66 ACTTCAAGAGGCATTCTGAAGTTAAAGTGTGGGTCATCTCTTGCCAT 20 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133655474695668