Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_013059.1
Length=40975
Score E
Sequences producing significant alignments: (Bits) Value
seq271029 470 4e-128
seq249728 224 3e-54
seq177630 174 4e-39
seq262377 113 1e-20
>seq271029
Length=527
Score = 470 bits (520), Expect = 4e-128
Identities = 429/544 (79%), Gaps = 20/544 (4%)
Strand=Plus/Plus
Query 1137 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 1196
|||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | |
Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60
Query 1197 AGAATCCCAGTAAGTCGCAGAAAGTGGTCAACATGACCATCTATGACGCTGAGCACTACA 1256
|||| || || ||| |||||| |||||||| ||||||||||||||||| || |||||||
Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120
Query 1257 CCGACGAGCAGAAAGAGCAAATCATCGCATCCTATCCTGAGCATGAGAGAGAGGCGCGTG 1316
||||||||||||||||||||||||| || || ||||||||||||||| | || |||||||
Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180
Query 1317 CTCGCGGTATTCCTACGATGGGTAGCGGTCGAATATTCCAGATACCGGAAGAGACGATTA 1376
| || ||||| || || |||||||||||| | || | ||| ||||| ||||| || || |
Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240
Query 1377 AGTGCCAGCCGTTTGAGTGTCCCGATCACTTCTATGTTATCGACGCTCAGGACTTCGGCT 1436
|||||||||||||||| ||||||||||||||||| |||||||||| || ||||| ||||
Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300
Query 1437 GGAACCACCCGCAAGCTCACATTCAGCTTTGGTGGGACAAAGACGCAGATGTTTTCTATC 1496
|||| ||||||||| |||| |||| ||||| || |||||||
Sbjct 301 GGAATCACCCGCAA--TCAC------------NNGGACGAAGAC------GTCTTCTATC 340
Query 1497 TGGCGCGTGTATGGAAGAAATCAGAGAACACTGCCGTTCAGGCGTGGGGTGCTGTTAAGT 1556
| || || || ||||||||||| ||||||||||| || ||||| ||||| ||| |||||
Sbjct 341 TTGCTCGAGTGTGGAAGAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTAAGT 400
Query 1557 CGTGGGCTAACAAAATACCTGTCGCGTGGCCTCATGACGGTCACCAACACGAAAAGGGCG 1616
| ||| | ||||| |||||||| || |||||||| || || ||||||||||| || ||||
Sbjct 401 CATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAGGCG 460
Query 1617 GTGGTGAGCAACTTAAAACCCAATATGCGGACGCCGGGTTCTCTATGCTTCCCGAACACG 1676
| |||||||| || || | ||||| || ||||| || ||| ||| | || || || |
Sbjct 461 GCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGCATG 520
Query 1677 CAAC 1680
| ||
Sbjct 521 CCAC 524
>seq249728
Length=458
Score = 224 bits (248), Expect = 3e-54
Identities = 329/464 (71%), Gaps = 25/464 (5%)
Strand=Plus/Minus
Query 2506 CAGAATGGTTGGGAGGATTTCGCAGAAAAATTCGACCTCGATGCTGATGATATTCCATCA 2565
||| ||||||||||| ||||| ||| ||| | ||||| | || || | ||
Sbjct 441 CAGGATGGTTGGGAGTCATTCGCTGAAGAATATGGACTCGACCCAGACGAAAAGCCTAGC 382
Query 2566 TTCCAGAACCCCAACGATTGGGTATTTCCATGGCTGACGCAGGA-CACAATTCAGATCGC 2624
|| || ||||||||||||||||| || |||||||| ||| | | | | | |||||
Sbjct 381 TTTCAATCTCCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGC 323
Query 2625 TGAGTTTTACGAAGTGGTCGAGAAGAAAGAGACGGCGTTTATCTACCAAGACCCGGTTAC 2684
||||| ||||||||| | |||||||||||| || | |||||| | |||||| | ||
Sbjct 322 TGAGTATTACGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAAC 263
Query 2685 GGGTGAGCCGGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATCGACGACCTGGCTGA 2744
|||||||| || |||||||| |||||| || | |||||
Sbjct 262 CGGTGAGCCAGTTAGCTACTTCAAGCGCATGCTT------------GCCGACC------- 222
Query 2745 TAGTGGATTTATCAAAATTGCAGAGCGCCAGATTAAGCGTCGCCGGGTATACAAATCAAT 2804
|||| | | || |||| ||| ||||||| || ||| |||| || ||| | ||
Sbjct 221 --GTGGCATGAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGAT 164
Query 2805 TATCACCTGCACCGCTGTACTCAAAGACAAGCAGCTC-ATTGCTGGCGAACATATCCCCA 2863
| |||| | |||| ||| | |||||| ||| | || || || || ||| | || |
Sbjct 163 TCTCACATCTTCCGCAGTATTGAAAGACC-GCACATTGATAGCCGGTGAGCATCTGCCGA 105
Query 2864 TTGTTCCGGTATTCGGCGAGTGGGGCTTCGTTGAAGATAAAGAAGTGTATGAGGGTGTCG 2923
|||| || || |||||||||||||| ||||| || ||||||||||| ||||||||| |||
Sbjct 104 TTGTGCCAGTGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCG 45
Query 2924 TCCGCCTGACAAAAGACGGTCAGCGTCTGCGCAACATGATTATG 2967
| | ||||| |||||||| ||||| ||||||||||||||||||
Sbjct 44 TTAGGCTGACGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1
>seq177630
Length=801
Score = 174 bits (192), Expect = 4e-39
Identities = 256/367 (70%), Gaps = 18/367 (5%)
Strand=Plus/Plus
Query 6031 CCTGAGCAACGGGCATACGCCAACGTTAACACCTCGCTGGCTGATGCAATGGCGGTGAAC 6090
|| ||| |||| | || |||||||| ||||| |||| |||||| | ||| | |||
Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60
Query 6091 ATCCTGAACGTT--AAGGATGCTCGCACCAACGTGTTCTGGGCTGATGACGCCATCCGTA 6148
||| ||||||| || | ||| || ||||| |||||||| ||||| | |||||||
Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118
Query 6149 TTGTGTCTCAGCCGATTCCGGCCAACCATGAGCTTTTTGCAGGTATGAAAACTACCTCAT 6208
| ||||||||||| |||||||||||| ||| || ||||| || |||||||| ||
Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGAC----- 173
Query 6209 TCAGCATCCCGGATGTCGGCCTGAACGGTATCTTCGCTACGCAGGGGGATATTTCCACCC 6268
| | || | || || ||||| || || | |||
Sbjct 174 ------TTCGNNNNNNNNNNNNNNNNNNNNTCATGGCGACTCAGGGCGACATCGCAACCT 227
Query 6269 TGTCCGGCCTGTGCCGTATTGCGCTGTGGTACGGCGTAAACGCGACACGACCGGAAGCAA 6328
|| |||| ||||||||||| |||||||| ||||| ||||| || || || |||||||
Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287
Query 6329 TCGGTGTTGGCCTGCCTGGTCAGACTGCGTAACTAACAGGGGCTTCGGCCCCTTTCTTAT 6388
|||| || ||||| ||||||| || || ||| | | |||||||||||||||| || |
Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAA-TCAATGGGGCTTCGGCCCCTT--TTCT 344
Query 6389 TTGAGGT 6395
|||||||
Sbjct 345 TTGAGGT 351
Score = 154 bits (170), Expect = 4e-33
Identities = 209/289 (72%), Gaps = 2/289 (1%)
Strand=Plus/Plus
Query 6924 CAAAGCCTAAGGCGGAAAGCGATGCAGATAAAGACTAAAGGCGATCTGGTCAGGGCGGCG 6983
||||||| |||| || | |||||| || |||| || || || | || | |||||
Sbjct 508 CAAAGCC-AAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCGGCA 566
Query 6984 CTGCGTAAGCTTGGTGTAGCATCAGATGCAACTCTCACTGATATCGAACCTCAGTCTATG 7043
||||| ||||| ||| | || || || || || || |||||| |||| || || || |||
Sbjct 567 CTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCAATG 626
Query 7044 CAGGATGCTGTTGACGACCTTGAAACGATGATGGCTGAGTGGTATCAGGACGGAAAGGGA 7103
|||| | ||| ||||||| |||| |||||||||||| |||||||||||||| ||
Sbjct 627 GAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGAGGG 686
Query 7104 ATCATCACCGGCTATGTATTCTCAGATGATGATAATCCTCCCGCTGAAGGTGATGATCAC 7163
|| ||||| ||||| | || | |||| || ||||||| || |||||||| || |||
Sbjct 687 ATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGACCAC 746
Query 7164 GGTCTTCGCTCAAGAGCAGTCAGCGCAGTATTCCACAATCTGGC-CTGC 7211
| || || || | | ||||||||| |||| || || || ||||
Sbjct 747 TCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGCACTGC 795
>seq262377
Length=537
Score = 113 bits (124), Expect = 1e-20
Identities = 226/329 (69%), Gaps = 6/329 (2%)
Strand=Plus/Plus
Query 8281 ATGGAGGCGTTGAGGTTCGATTCGCATGAACTGCTGATTATCCATCTCCCGCGTCATGTG 8340
|||||| | || | |||||| || || || | || ||||| || ||| | ||||
Sbjct 210 ATGGAGTCCTTACGATTCGATGGTCACGAGCTAATCATCATCCACCTACCGAATGATGTA 269
Query 8341 CTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCATACTGAAAACCGGT 8400
|| || || |||||| |||| |||||||| |||||||||| || |||||||| ||
Sbjct 270 CTTTGCTATGACGCCTCAGCAAGTCAGAACGGTCCGCAATGGTCAATCCTGAAAACTGGA 329
Query 8401 TTATACGACGATGTTTATCGCGCCATCGATTTCATGTACGAAGGCAACCAGATTACGTGT 8460
| || || | |||| || ||||| |||||||| || || ||||||||||| ||
Sbjct 330 CTCTATGATACTCCGCATCGTGCTATCGACTTCATGTATGAGGGTAACCAGATTACCTGC 389
Query 8461 GGCGACAAGTCAGAAGCGGTGACAGGGCAGTTGCAATTCGACATTAGTAGT--CAGTACG 8518
|| |||||| | || | ||||| ||| | | |||| | | | | | |||||||
Sbjct 390 GGAGACAAGACGCAATCTGTGACCGGGTA-TCTTAATTATGC-TCACTCATCACAGTACG 447
Query 8519 ACAAGCAGCAAGAACATCTGTTGTTTACACCCCTCTTCAAAGCGGACAA-TGCCAGATGC 8577
|| |||||||||| || | | || || || ||||| || || || || |||
Sbjct 448 ACGCAGAGCAAGAACACCTTCTCTACACGCCACTTTTCAAGGCTGATAACAACCTGAT-A 506
Query 8578 TTCGACCTCGAAGTTGAATCATCCACTGG 8606
||||| ||||| | ||| |||| || ||
Sbjct 507 TTCGATTTCGAATTAGAAGCATCAACAGG 535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130574282691372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |