Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_013059.1 Length=40975 Score E Sequences producing significant alignments: (Bits) Value seq271029 470 4e-128 seq249728 224 3e-54 seq177630 174 4e-39 seq262377 113 1e-20 >seq271029 Length=527 Score = 470 bits (520), Expect = 4e-128 Identities = 429/544 (79%), Gaps = 20/544 (4%) Strand=Plus/Plus Query 1137 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 1196 |||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | | Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60 Query 1197 AGAATCCCAGTAAGTCGCAGAAAGTGGTCAACATGACCATCTATGACGCTGAGCACTACA 1256 |||| || || ||| |||||| |||||||| ||||||||||||||||| || ||||||| Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120 Query 1257 CCGACGAGCAGAAAGAGCAAATCATCGCATCCTATCCTGAGCATGAGAGAGAGGCGCGTG 1316 ||||||||||||||||||||||||| || || ||||||||||||||| | || ||||||| Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180 Query 1317 CTCGCGGTATTCCTACGATGGGTAGCGGTCGAATATTCCAGATACCGGAAGAGACGATTA 1376 | || ||||| || || |||||||||||| | || | ||| ||||| ||||| || || | Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240 Query 1377 AGTGCCAGCCGTTTGAGTGTCCCGATCACTTCTATGTTATCGACGCTCAGGACTTCGGCT 1436 |||||||||||||||| ||||||||||||||||| |||||||||| || ||||| |||| Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300 Query 1437 GGAACCACCCGCAAGCTCACATTCAGCTTTGGTGGGACAAAGACGCAGATGTTTTCTATC 1496 |||| ||||||||| |||| |||| ||||| || ||||||| Sbjct 301 GGAATCACCCGCAA--TCAC------------NNGGACGAAGAC------GTCTTCTATC 340 Query 1497 TGGCGCGTGTATGGAAGAAATCAGAGAACACTGCCGTTCAGGCGTGGGGTGCTGTTAAGT 1556 | || || || ||||||||||| ||||||||||| || ||||| ||||| ||| ||||| Sbjct 341 TTGCTCGAGTGTGGAAGAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTAAGT 400 Query 1557 CGTGGGCTAACAAAATACCTGTCGCGTGGCCTCATGACGGTCACCAACACGAAAAGGGCG 1616 | ||| | ||||| |||||||| || |||||||| || || ||||||||||| || |||| Sbjct 401 CATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAGGCG 460 Query 1617 GTGGTGAGCAACTTAAAACCCAATATGCGGACGCCGGGTTCTCTATGCTTCCCGAACACG 1676 | |||||||| || || | ||||| || ||||| || ||| ||| | || || || | Sbjct 461 GCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGCATG 520 Query 1677 CAAC 1680 | || Sbjct 521 CCAC 524 >seq249728 Length=458 Score = 224 bits (248), Expect = 3e-54 Identities = 329/464 (71%), Gaps = 25/464 (5%) Strand=Plus/Minus Query 2506 CAGAATGGTTGGGAGGATTTCGCAGAAAAATTCGACCTCGATGCTGATGATATTCCATCA 2565 ||| ||||||||||| ||||| ||| ||| | ||||| | || || | || Sbjct 441 CAGGATGGTTGGGAGTCATTCGCTGAAGAATATGGACTCGACCCAGACGAAAAGCCTAGC 382 Query 2566 TTCCAGAACCCCAACGATTGGGTATTTCCATGGCTGACGCAGGA-CACAATTCAGATCGC 2624 || || ||||||||||||||||| || |||||||| ||| | | | | | ||||| Sbjct 381 TTTCAATCTCCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGC 323 Query 2625 TGAGTTTTACGAAGTGGTCGAGAAGAAAGAGACGGCGTTTATCTACCAAGACCCGGTTAC 2684 ||||| ||||||||| | |||||||||||| || | |||||| | |||||| | || Sbjct 322 TGAGTATTACGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAAC 263 Query 2685 GGGTGAGCCGGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATCGACGACCTGGCTGA 2744 |||||||| || |||||||| |||||| || | ||||| Sbjct 262 CGGTGAGCCAGTTAGCTACTTCAAGCGCATGCTT------------GCCGACC------- 222 Query 2745 TAGTGGATTTATCAAAATTGCAGAGCGCCAGATTAAGCGTCGCCGGGTATACAAATCAAT 2804 |||| | | || |||| ||| ||||||| || ||| |||| || ||| | || Sbjct 221 --GTGGCATGAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGAT 164 Query 2805 TATCACCTGCACCGCTGTACTCAAAGACAAGCAGCTC-ATTGCTGGCGAACATATCCCCA 2863 | |||| | |||| ||| | |||||| ||| | || || || || ||| | || | Sbjct 163 TCTCACATCTTCCGCAGTATTGAAAGACC-GCACATTGATAGCCGGTGAGCATCTGCCGA 105 Query 2864 TTGTTCCGGTATTCGGCGAGTGGGGCTTCGTTGAAGATAAAGAAGTGTATGAGGGTGTCG 2923 |||| || || |||||||||||||| ||||| || ||||||||||| ||||||||| ||| Sbjct 104 TTGTGCCAGTGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCG 45 Query 2924 TCCGCCTGACAAAAGACGGTCAGCGTCTGCGCAACATGATTATG 2967 | | ||||| |||||||| ||||| |||||||||||||||||| Sbjct 44 TTAGGCTGACGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1 >seq177630 Length=801 Score = 174 bits (192), Expect = 4e-39 Identities = 256/367 (70%), Gaps = 18/367 (5%) Strand=Plus/Plus Query 6031 CCTGAGCAACGGGCATACGCCAACGTTAACACCTCGCTGGCTGATGCAATGGCGGTGAAC 6090 || ||| |||| | || |||||||| ||||| |||| |||||| | ||| | ||| Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60 Query 6091 ATCCTGAACGTT--AAGGATGCTCGCACCAACGTGTTCTGGGCTGATGACGCCATCCGTA 6148 ||| ||||||| || | ||| || ||||| |||||||| ||||| | ||||||| Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118 Query 6149 TTGTGTCTCAGCCGATTCCGGCCAACCATGAGCTTTTTGCAGGTATGAAAACTACCTCAT 6208 | ||||||||||| |||||||||||| ||| || ||||| || |||||||| || Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGAC----- 173 Query 6209 TCAGCATCCCGGATGTCGGCCTGAACGGTATCTTCGCTACGCAGGGGGATATTTCCACCC 6268 | | || | || || ||||| || || | ||| Sbjct 174 ------TTCGNNNNNNNNNNNNNNNNNNNNTCATGGCGACTCAGGGCGACATCGCAACCT 227 Query 6269 TGTCCGGCCTGTGCCGTATTGCGCTGTGGTACGGCGTAAACGCGACACGACCGGAAGCAA 6328 || |||| ||||||||||| |||||||| ||||| ||||| || || || ||||||| Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287 Query 6329 TCGGTGTTGGCCTGCCTGGTCAGACTGCGTAACTAACAGGGGCTTCGGCCCCTTTCTTAT 6388 |||| || ||||| ||||||| || || ||| | | |||||||||||||||| || | Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAA-TCAATGGGGCTTCGGCCCCTT--TTCT 344 Query 6389 TTGAGGT 6395 ||||||| Sbjct 345 TTGAGGT 351 Score = 154 bits (170), Expect = 4e-33 Identities = 209/289 (72%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 6924 CAAAGCCTAAGGCGGAAAGCGATGCAGATAAAGACTAAAGGCGATCTGGTCAGGGCGGCG 6983 ||||||| |||| || | |||||| || |||| || || || | || | ||||| Sbjct 508 CAAAGCC-AAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCGGCA 566 Query 6984 CTGCGTAAGCTTGGTGTAGCATCAGATGCAACTCTCACTGATATCGAACCTCAGTCTATG 7043 ||||| ||||| ||| | || || || || || || |||||| |||| || || || ||| Sbjct 567 CTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCAATG 626 Query 7044 CAGGATGCTGTTGACGACCTTGAAACGATGATGGCTGAGTGGTATCAGGACGGAAAGGGA 7103 |||| | ||| ||||||| |||| |||||||||||| |||||||||||||| || Sbjct 627 GAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGAGGG 686 Query 7104 ATCATCACCGGCTATGTATTCTCAGATGATGATAATCCTCCCGCTGAAGGTGATGATCAC 7163 || ||||| ||||| | || | |||| || ||||||| || |||||||| || ||| Sbjct 687 ATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGACCAC 746 Query 7164 GGTCTTCGCTCAAGAGCAGTCAGCGCAGTATTCCACAATCTGGC-CTGC 7211 | || || || | | ||||||||| |||| || || || |||| Sbjct 747 TCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGCACTGC 795 >seq262377 Length=537 Score = 113 bits (124), Expect = 1e-20 Identities = 226/329 (69%), Gaps = 6/329 (2%) Strand=Plus/Plus Query 8281 ATGGAGGCGTTGAGGTTCGATTCGCATGAACTGCTGATTATCCATCTCCCGCGTCATGTG 8340 |||||| | || | |||||| || || || | || ||||| || ||| | |||| Sbjct 210 ATGGAGTCCTTACGATTCGATGGTCACGAGCTAATCATCATCCACCTACCGAATGATGTA 269 Query 8341 CTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCATACTGAAAACCGGT 8400 || || || |||||| |||| |||||||| |||||||||| || |||||||| || Sbjct 270 CTTTGCTATGACGCCTCAGCAAGTCAGAACGGTCCGCAATGGTCAATCCTGAAAACTGGA 329 Query 8401 TTATACGACGATGTTTATCGCGCCATCGATTTCATGTACGAAGGCAACCAGATTACGTGT 8460 | || || | |||| || ||||| |||||||| || || ||||||||||| || Sbjct 330 CTCTATGATACTCCGCATCGTGCTATCGACTTCATGTATGAGGGTAACCAGATTACCTGC 389 Query 8461 GGCGACAAGTCAGAAGCGGTGACAGGGCAGTTGCAATTCGACATTAGTAGT--CAGTACG 8518 || |||||| | || | ||||| ||| | | |||| | | | | | ||||||| Sbjct 390 GGAGACAAGACGCAATCTGTGACCGGGTA-TCTTAATTATGC-TCACTCATCACAGTACG 447 Query 8519 ACAAGCAGCAAGAACATCTGTTGTTTACACCCCTCTTCAAAGCGGACAA-TGCCAGATGC 8577 || |||||||||| || | | || || || ||||| || || || || ||| Sbjct 448 ACGCAGAGCAAGAACACCTTCTCTACACGCCACTTTTCAAGGCTGATAACAACCTGAT-A 506 Query 8578 TTCGACCTCGAAGTTGAATCATCCACTGG 8606 ||||| ||||| | ||| |||| || || Sbjct 507 TTCGATTTCGAATTAGAAGCATCAACAGG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130574282691372