Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq51813 159 4e-34 seq80369 104 3e-17 seq49094 100 3e-16 seq38040 89.7 6e-13 >seq51813 Length=3444 Score = 159 bits (176), Expect = 4e-34 Identities = 636/992 (64%), Gaps = 37/992 (4%) Strand=Plus/Minus Query 98734 AAAGTTACGGGGGCTTATTTTGTAGAATGGGGTGTTTACGATCGCAAATTTCCAGCAGAT 98793 |||||| ||| || || || |||||||||||||| || | | || || || | ||| Sbjct 1342 AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTATCCTAGAAAGTTCCCCGTGGAT 1283 Query 98794 AAAGTGCCTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGC 98853 | ||||| || ||| | || || | | ||||| ||||| ||||||||||| || Sbjct 1282 CGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGT 1223 Query 98854 GACGGTATAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCG 98913 ||||| ||||| ||||| ||||| | | || ||| | | | ||| || Sbjct 1222 GACGGCATAAATGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCC 1163 Query 98914 TGCGATAAGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAA 98973 || | || || || || || ||||||||| | | || |||| ||| Sbjct 1162 TGTAGCGGCCGTGAGGACTTTAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1103 Query 98974 CCACAACAGGG--TGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTA 99031 |||||| | || ||||| | | |||||||| ||| ||||| ||||| || | | Sbjct 1102 CCACAAAAAGGATTGTCTTCA--TGGAACGAGCCCTACAAAGGCAACTTCGGCCAATTAA 1045 Query 99032 TGGCCATACGTAAACA---CAACCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGA 99088 || | || ||||| | ||| | | || || || ||| ||| ||||| |||| Sbjct 1044 TGTCACTA---AAACAAGCCCGCCCGGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGA 988 Query 99089 CTCTTAGCGACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACT 99148 | ||| ||| || || | ||||| | ||| | | ||| | | | || || | | Sbjct 987 CGCTTGCCGATCCTTTTTTCTTTTTAGTTGATAAATCTAAGAGAACACGATTTGTGCAGT 928 Query 99149 CGGTTCGTGAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGGAGT 99208 | || || || || | |||||||| ||||| |||||||| ||||| ||||||| Sbjct 927 CAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGT 868 Query 99209 TTCCTGGCGGAAAGGGGGCCAACCCTGAAGTAGGAAATCCTAATGAGGACGGAAACACTT 99268 ||||||| || || || || |||||||| | || | || || || || | | Sbjct 867 TTCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCA---GAAGATGGTGATTGCT 811 Query 99269 ATGTCACACTTCTGCAAGAGCTTCGTTTGATGCTTGACGAATTG---GGTGTG---GCCA 99322 |||| | | || |||| | ||| |||||| || || | | | | | || Sbjct 810 ATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCTAAGAATGGCA 751 Query 99323 ATAAACGTGTTTACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGG 99382 | ||| |||||| |||| ||| | || | || | ||||||||| | || | Sbjct 750 AGAAA------TACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTG 697 Query 99383 TCGATTACTCTACAGCCAG--TCAATATT---TGGACCATGTGTTTTTAATGAGTTACGA 99437 | || |||| || || |||| ||| |||| ||| | || || ||||| || || Sbjct 696 TTGA-----CTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGCTATGA 642 Query 99438 TTTTAAAGGCGCCTGGTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCAT 99496 || || || |||||||| || | ||| | || ||||||||||||||||| || || Sbjct 641 CTTCAAGGGAGCCTGGTCAAATGAC-ACTCTTGGACATCAAACACCATTGTACGCGCCTG 583 Query 99497 CGTGGAACTCCGAAGAGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAA 99556 | ||||| || | || | |||||| | || | | || ||| | | || | Sbjct 582 CATGGAATCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATATTTGTTGGCACAGG 523 Query 99557 AAGTGCCTTCTCACAAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAG 99616 |||| | || | ||||||||| | || || |||||||| || | || |||| ||| | Sbjct 522 GAGTGAATCCTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCG 463 Query 99617 TGCATGACTACAAAAATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCA 99676 | ||||| ||| || | || | || || || || || ||||| || ||||| | Sbjct 462 TTCATGATTACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTA 403 Query 99677 CCTGGGAAAACGGTGTTGTTGATTATAGGCAG 99708 | ||| || |||| || || ||||| ||| || Sbjct 402 CTTGGCAAGACGGAGTGGTGGATTACAGGGAG 371 >seq80369 Length=3501 Score = 104 bits (114), Expect = 3e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 46382 AACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCG 46441 ||||| ||||||| |||||| ||||| ||||||||||| || ||||| || | | || Sbjct 404 AACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGATAGCGTTCTAGCATCC 345 Query 46442 TCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 46501 ||||| ||||| || || || || | | |||||| || | || | || ||||||||| Sbjct 344 TCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCT 285 Query 46502 ATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| || | || | | || || || || || || |||| || || || Sbjct 284 TCTATCTTTGCTTTTACATTCTCGATAGTATCACTAGACTCTACTTCCAATGTTATTGTC 225 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | |||||||||||||| ||||| Sbjct 224 TTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193 >seq49094 Length=1117 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| ||||| || ||||| || ||||| ||||| || || ||||| | || || Sbjct 210 CACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATCTTC 151 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 || ||||| |||||||| || || | || || || | || | || |||||||| Sbjct 150 CAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTG 91 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||| | || | | || || | |||||| |||| ||||| ||||| Sbjct 90 AATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTT 31 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| ||||||||||| |||||||| Sbjct 30 GCCGGTCAGTGTTTTAACAAAAATTTGCAT 1 >seq38040 Length=2861 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| ||||||| |||||| || | || || ||||| || ||||||||||| Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| |||| || | ||||| || || || ||||| || || || || | || Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || || ||||| || || ||| | | | | ||||| | ||| || Sbjct 2585 ATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACT 2644 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||| || ||||| || || || ||||||||||| |||||||| Sbjct 2645 TCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563312081663760