Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq51813 187 2e-42 seq98588 104 2e-17 seq38040 104 2e-17 seq49094 86.0 4e-12 >seq51813 Length=3444 Score = 187 bits (206), Expect = 2e-42 Identities = 812/1263 (64%), Gaps = 50/1263 (4%) Strand=Plus/Plus Query 5862 GCGTCTATTTCCCACGCAAATAAACCACCCAAATTTTTGCTCACTACATACTTACCTTTT 5921 ||||| |||||||| ||||| | |||||| | || || | ||||| ||||| ||| Sbjct 186 GCGTCGATTTCCCAAGCAAAGAGACCACCTAGTTTGTTATTTCTCACATATTTACCCTTT 245 Query 5922 GCTACCACCGATTGATCGTTGTCGTACGTAACTAAATCATTATT--ATCGT----AGACG 5975 | | || ||| | ||||| || || || | || | | || || |||| Sbjct 246 TCAATAACTGATCTGGCATTGTCATAGGTTACAAGGTCTCCAGTTGATGGTCTGAAGACA 305 Query 5976 TACGGAGATTGTGCAATGTTATCATA--GAATTGTACACTTTCGTCGTACCTATTTA--- 6030 || |||| ||| || | || || || ||| | ||||| | | | | | |||| Sbjct 306 TAAGGAGCTTGGGCGACATTGTCGTAATGAAATTCCCACTTGCCTTG-AGCAATTTCATT 364 Query 6031 --CAATATCTTTATAATCGATTACGCCGCTTTCCCATGTACCTTTAACGGGAGCGCTAGC 6088 |||| || | ||||| | || ||| || ||| |||||||| || || | |||| Sbjct 365 CGCAATCTCCCTGTAATCCACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGC 424 Query 6089 TATTCCTGTAAACGGATTATTGTTTTCG-ACTCGATGCACACCGCTCCAGCCGCGTCCAT 6147 | ||||| || ||| | |||| |||| | || ||| || || |||| || || |||| Sbjct 425 GTTGCCTGTGAAGGGAATGTTGTCTTCGTAATC-ATGAACGCCAGTCCAACCACGACCAT 483 Query 6148 ACATAGCCACACCTACTACTAATTTAGTCGAATCGACATTTTGATTTAACAA-TCTGTTA 6206 |||| || ||||||| ||| | || | | || || || ||||| | | ||| Sbjct 484 ACATGGCAACACCTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAATATTTTA 543 Query 6207 ATAGCAAAATGGGTTGTGTAATTTTCGTTAACGTCCCACGAAGGAGCGTAAAGCGGTGTT 6266 | | || | | ||||||| |||| || | ||| | ||| ||||| | |||||| Sbjct 544 CTC-CGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTT 602 Query 6267 TGAAAACCCAAATTTTCCATGGACCAAGCGCCTTTAAAATCGTAGGTCATTACAAATATA 6326 ||| || | | | || | ||||| || || || || || ||| |||| | || ||| Sbjct 603 TGATGTCCAAGAGTGTCATTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATA 662 Query 6327 TAATCGAGATAGCGTTGCGCGTCTGTATAATCGACAACGTCGATTTTGTCGTAACCGGCA 6386 | ||| | ||| ||| || | || || ||||| | |||||| || | || | Sbjct 663 TGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAG 722 Query 6387 CCGATAGCGCTAGTTAGTTGCAATCGTTTACCTCTCtttttttCCAATTTGTTGAGCATT 6446 | ||||| ||| | || || || || |||| | | | | |||||| Sbjct 723 CTAATAGCAGAAGTCAATTCGTATTTCTTGCCATTCTTAGCTGAGAGCTCATCGAGCATC 782 Query 6447 TCGCGTAACTCCTTTAAAAGTATTGTATATGTTTTGCGATCCACTGAAGCGTTGCCCAGC 6506 || ||||| || || | | || ||| | | ||| ||| | | || || Sbjct 783 TCACGTAATTCTTTCATCAAACTTACATAGCAATCACCATCTTCTGG---GCTACCGAGG 839 Query 6507 GACGGGTTGGCACCTTTACCGCCCGGAAACTCCCAATCTATGTCGACGCCGTCGAAAAAT 6566 ||||| |||||||| || || |||||||||||||| || || || || ||||| ||| Sbjct 840 TCAGGGTTAGCACCTTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAAT 899 Query 6567 TTCCACGTTTCCAAAAATTCGCGCACACTATCAACAAA-CGTATT----TCGTTTT-TCG 6620 ||||| ||| | ||| || || | ||||| ||| || | | ||| || Sbjct 900 TTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTATCA 959 Query 6621 ACGTCGTTTAACTGGTAAAACGGATCGCTAAGCGTCCATCCGCCTATCGATGGCAATATT 6680 || ||| | |||| |||||| ||||||||| || || || || || | || Sbjct 960 AC------TAAAAAGAAAAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATC 1013 Query 6681 GTTAAATCTGGATTGTGGCGCTTGATC----GCCATTAACTGTCCAAAGTTTCCTTTGTA 6736 | || || || | || ||||| | | |||||| || || ||||| |||||||| Sbjct 1014 TTCAATTCCGG---GCGG-GCTTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTA 1069 Query 6737 CGGTTCGTTGTAGGCCTCGACA--CCTTTTTGTGGTTTTTGAAGCGCTCCCCATATATCA 6794 || ||||| | | |||| ||||||||||||||||| | ||| ||||| ||| Sbjct 1070 GGGCTCGTTCCATGAA--GACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCG 1127 Query 6795 TGAATGGTTACTTTGAAATCTTTTCGGCCGGCGCACGATTTTTGCAACGCCTC-AAACGA 6853 || || | ||||| || || | |||||| || || ||||| || | |||| Sbjct 1128 TGGATTGAGACTTTAAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTG 1187 Query 6854 ACTGGGTATTTGTTGTTTAAGCGCATCGTTTACACCATCGCCGCCACAAATTGGTATAAA 6913 || | || | || |||||| || |||| || || ||||| ||||| || ||||| Sbjct 1188 CCTTCG-ATCTCTT--TTAAGCTG-TCATTTATGCCGTCACCGCCGCAAATGGGAATAAA 1243 Query 6914 CCCGTACAACAAATGTGTAAGATTAGGAATGGGAATTTTGTCGGCGGGATATTGTCTATC 6973 || || | |||||| ||||||||||| || || || || |||| | | |||| Sbjct 1244 GCCATAGAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAACTTTCTAGG 1303 Query 6974 GTAAACACCCCATTCCACAAAGTAAGCGCCCACAACATTATCGGTAATTTTTTCGAACGG 7033 || ||||||||||| || ||||| ||||||||||| || | | ||| | ||| || Sbjct 1304 ATAGACACCCCATTCTACGAAGTAGGCGCCCACAACTTTTCCAGATGTTTGCTTGAATGG 1363 Query 7034 TACATTGTTTTCCGACCACATATATTTTATAGGATTTAAATGCGAACCGTCTGTATCGGC 7093 ||| ||||| | |||||| | |||| ||||| || || |||||||| Sbjct 1364 CTTATTTTTTTCTCCCAGTGTATATTCCAGAGGAGGCAAATGACTTCCATCAGTATCGGC 1423 Query 7094 CAC 7096 ||| Sbjct 1424 CAC 1426 >seq98588 Length=355 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||||| |||||| || | ||| ||||||||| || || || |||| Sbjct 340 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 281 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | ||| |||| |||||||| || || |||| || | |||||||||||| | || Sbjct 280 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 221 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||| |||||||| ||||| ||| | | | | || || | | |||||| Sbjct 220 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACT 161 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||| |||||| || || || |||| ||||| || || |||||||| Sbjct 160 TCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq38040 Length=2861 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| ||||| ||||||||||| ||||||||| || || || || | | Sbjct 1553 CCACCGCGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGAC 1612 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | ||| |||| |||| || || || | ||||||| ||| || ||||| | ||| Sbjct 1613 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGA 1672 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | || |||||||| || || ||||| | | | ||||||| | |||||| Sbjct 1673 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACT 1732 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || || || ||||| || || | || ||||| ||||||||||| Sbjct 1733 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 1779 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||||||||||||| |||| || | ||| ||||||||| || || || |||| Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | ||| | || |||||||| || || ||||||| ||||| || ||||| | || Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||||||| ||||| |||| | | | |||||| | ||| || Sbjct 2585 ATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACT 2644 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || ||||||||||| || || | ||||| || || || ||||| Sbjct 2645 TCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 >seq49094 Length=1117 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 ||||| ||||| |||||||| ||| || || ||||||||||| | || || || Sbjct 671 CGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCA 612 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || || | ||||| || ||||||| | | ||| || || | || | ||||||||| Sbjct 611 TCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTG 552 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || |||||| |||| | ||| ||| || | |||||| ||||| ||||| Sbjct 551 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATC 492 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || || | || ||||| || || ||||| Sbjct 491 GTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346215368760254