Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq51813 156 4e-33 seq38040 129 6e-25 seq49094 111 2e-19 seq210326 96.9 3e-15 seq22409 96.9 3e-15 seq55316 93.3 4e-14 seq98588 91.5 1e-13 seq63803 91.5 1e-13 >seq51813 Length=3444 Score = 156 bits (172), Expect = 4e-33 Identities = 260/376 (69%), Gaps = 0/376 (0%) Strand=Plus/Plus Query 62339 AAAACGGATCGGACAGGGTCCAGCCGCCGATGGAGGGCAGCACGCGCAGGTGCGGGTGCG 62398 |||| ||||||| || ||||| || || || ||||| || | || | |||| | | Sbjct 970 AAAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCCGGGCGGG 1029 Query 62399 CTTTCTTGATGGCCATCAGCTGGCCGAAGTTGCCCTTGTACGGCTCGCTCCACGCGGTCA 62458 ||| || | | ||| | |||||||||||||| ||||| |||||| |||| | | || Sbjct 1030 CTTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACA 1089 Query 62459 CGCCCTTTTGCGGCTTTTGCACGGCCGCCCACGGGTCGTGCACCGCCAGTTTGAAGTCGT 62518 || ||||| || ||||| | || ||||| || ||||| | | | ||| ||||| | Sbjct 1090 ATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCT 1149 Query 62519 CGCGGCCCGCGCACGAGCGCTGCAGCGCCTCGAAGCTGCCCGCGATGGACTTGAGGCTGT 62578 | ||||| || || || ||||| || | ||| ||||| |||| || | ||||| Sbjct 1150 CACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTGT 1209 Query 62579 CGTTGATGCCGTCCCCGCCGCACATCGGCACGAAGCCGTACAGCAGATGCGTGAGGTTGG 62638 | || |||||||| |||||||| || || | ||||| || |||| ||| || || || | Sbjct 1210 CATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAG 1269 Query 62639 GCACGGGCACCTTGTCGGCGGGAAACTCGCGTCCGTACACGCCCCACTCGACGAAATAGG 62698 | | || | || |||| |||| | || || ||||| || ||||| |||| Sbjct 1270 GTATAGGTATACGATCCACGGGGAACTTTCTAGGATAGACACCCCATTCTACGAAGTAGG 1329 Query 62699 CGCCCACCACCTTGCC 62714 ||||||| || || || Sbjct 1330 CGCCCACAACTTTTCC 1345 >seq38040 Length=2861 Score = 129 bits (142), Expect = 6e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || ||||| || ||||| || ||||| ||||| | || || || || | Sbjct 1779 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCA 1720 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| |||||| || |||| ||||||||||| |||||| | || ||| Sbjct 1719 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1660 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || |||| ||| || || |||||||| || | ||||| || ||||||||| Sbjct 1659 CAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 1600 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||| | || ||||||| || || ||| Sbjct 1599 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGT 1564 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || || ||||| || || | || || || || | Sbjct 2691 ATGCAAATTTTTGTTAAAACACTTACAGGAAAAACAATTACGTTAGAAGTTGAAGCTTCT 2632 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| |||| | ||||| | |||||||| || ||||| | || ||| Sbjct 2631 GACACAATTGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 2572 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | |||| || || || || |||| |||| |||||||| |||||||||| Sbjct 2571 CAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGACTACAAC 2512 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||| ||| | || || || |||||||||||||| |||| || Sbjct 2511 ATTCAAAAAGAATCCACCCTCCACCTGGTGCTGCGTTTGCGAGGAGG 2465 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || || || || || || || || || | || || ||| | | Sbjct 2235 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACTATAACTCTAGAGGTGGAGCCATCT 2176 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | ||||| | || | || || | || |||||||| ||||| | || || Sbjct 2175 GATACCATTGAAAACG-TAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCA 2117 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || ||||| | || ||||| ||| |||| || | ||| ||| | |||||||| Sbjct 2116 ACAACGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGGCGTACCTTATCTGACTACAA 2057 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || || ||| | || || ||| || |||| || Sbjct 2056 CATCCAAAAGGAGTCTACCCTTCATCTTGTACTACGTCTGCGAGGTGG 2009 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || || || || || || ||||| || | || || ||| | | Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 2404 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | ||||||| |||||||| || || || | || ||| Sbjct 2403 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 2344 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || || || |||| || | |||||||| |||||||| Sbjct 2343 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTATCTGACTACAAT 2284 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||| ||| | || || || | || ||||||||| |||| || Sbjct 2283 ATTCAAAAAGAATCTACCCTTCACCTAGTACTGCGTTTGCGAGGAGG 2237 >seq49094 Length=1117 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || ||||| || || || |||||||| || || | || || || || | Sbjct 456 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACGATTACATTGGAAGTGGAAGCTTC 515 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | ||| |||| | |||||| | |||||||| || ||||| ||||||| Sbjct 516 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCA 575 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| |||| |||| || || |||||||| || || | || || || || || || Sbjct 576 ACAGAGGCTTATTTTTGCAGGAAAACAGCTAGAAGATGGTCGTACGCTGTCAGATTATAA 635 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || || |||||| | || |||| ||||||||||| Sbjct 636 TATTCAGAAGGAATCAACTTTGCACTTGGTGCTGCG 671 >seq210326 Length=301 Score = 96.9 bits (106), Expect = 3e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| ||||| ||||| ||||| ||||||||||| || |||||||| | || ||||||| Sbjct 29 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAATCCTCGTTTTT 88 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | | ||||||||| | || || ||||| || || || | |||| || ||||| |||| Sbjct 89 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTTCCTCAACTGCCGCAAAAG 148 Query 133037 C 133037 | Sbjct 149 C 149 >seq22409 Length=1756 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| || || || ||||| |||||||| ||| |||| || || ||| | Sbjct 1664 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAAGCCTC 1605 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | ||| | |||| ||||| | || || || || ||||| | ||||| Sbjct 1604 TGATACTATAGAAAATGTAAAAGCGAAAATTCAAGATAAGGAAGGTATTCCACCAGACCA 1545 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || | || | || || |||||||| || || | || || | |||||||| Sbjct 1544 GCAACGTTTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCTGACTACAA 1485 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||| ||||||||| | || ||||| | ||||| Sbjct 1484 CATTCAAAAGGAATCCACATTGCATCTTGTGCT 1452 >seq55316 Length=1040 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 133382 CCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATAC 133441 |||| || | ||| || || || | ||||||||||| || || |||||||| ||||| Sbjct 468 CCTTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCT 409 Query 133442 TCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACA 133501 ||| ||||| | |||||| || || || || || || || | |||||||| | ||||| Sbjct 408 GCCATATGTCTGGATATTGGATTGGGAATATAACGAAACGTCTAGGGTTTTCTCTCAACA 349 Query 133502 GCGGCTCCGCTTGGGGGTCGAACG 133525 | ||||| ||| ||||| |||| Sbjct 348 GAGGCTCAAGTTGTGGGTCAAACG 325 >seq98588 Length=355 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || || ||||| || | || || || || | Sbjct 114 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 173 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | ||||| | |||| ||||||| ||||||||||| || || | || || Sbjct 174 GATACTATTGAAAACG-TAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 232 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || || |||| || | ||||| || ||||||||| Sbjct 233 GCAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGACTACAA 292 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||| ||| | || || || ||||| ||||| Sbjct 293 CATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGT 329 >seq63803 Length=1726 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 |||||| || | ||||| ||||| || || || |||||||| || || ||||| || || Sbjct 324 CATCACTCCCCACTTTTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTC 265 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCT 132700 ||| || ||||| |||||||||| || || || |||||||||||||| Sbjct 264 CAATGAGATGAGATTCATAAAATCGAATGGATTCTGTGTGTTGTAGTGCT 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498468223601920