Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq59246 93.3 5e-14 >seq59246 Length=1357 Score = 93.3 bits (102), Expect = 5e-14 Identities = 232/350 (66%), Gaps = 12/350 (3%) Strand=Plus/Minus Query 112297 CTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 112356 ||||| ||||||||||||||||||||| | || || || || || ||| ||||||| Sbjct 422 CTCAAGTGGAGACTGGTACACCATATATGTTGTATAAGGATGCTTGCAACAGGAAGAGTA 363 Query 112357 ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTA 112416 ||||||| ||| | || || || || ||| || || || || | || ||| | Sbjct 362 ATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACA 303 Query 112417 CAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 112476 | || |||| ||| ||||| ||||| || || || || || || || ||| | Sbjct 302 CTTCAGAAAATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGTTG 243 Query 112477 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAA 112536 | | | || | |||| ||| | ||||| | | ||| || || | ||| || Sbjct 242 A-----AAATAATCA-ATTTCATTTTAAAAAATTAAAAGAAACCACTAAGATTGTGACTC 189 Query 112537 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAAT 112593 |||| |||||| ||| |||||| || ||||| || || ||| || | | Sbjct 188 AAAATTTAAACAAAGTCATTGATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTT 132 Query 112594 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGAT 112643 | |||||||| |||||||| || ||| | ||||| || ||| | || ||| Sbjct 131 CAAATATGAGGCACCGTCCTATCGGTATTGGTGTTCAGGGTATGGCAGAT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618626925419360