Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_014900.1 Length=40986 Score E Sequences producing significant alignments: (Bits) Value seq271029 455 8e-124 seq249728 224 3e-54 seq177630 156 1e-33 seq262377 122 2e-23 seq272380 98.7 3e-16 >seq271029 Length=527 Score = 455 bits (504), Expect = 8e-124 Identities = 426/544 (78%), Gaps = 20/544 (4%) Strand=Plus/Plus Query 24816 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 24875 |||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | | Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60 Query 24876 AGAATCCCAGTAAGTCGCAGAAAGTGGTCAACATGACCATCTATGATGCTGAGCACTACA 24935 |||| || || ||| |||||| |||||||| |||||||||||||| || || ||||||| Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120 Query 24936 CCGACGAGCAGAAAGAGCAAATCATAGCATCCTATCCTGAGCATGAGAGAGAGGCACGTG 24995 ||||||||||||||||||||||||| || || ||||||||||||||| | || || |||| Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180 Query 24996 CTCGTGGTATTCCTACGATGGGTAGCGGTCGAATATTCCAGATACCGGAAGAGACGATTA 25055 | || ||||| || || |||||||||||| | || | ||| ||||| ||||| || || | Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240 Query 25056 AGTGCCAGCCGTTTGAGTGTCCCGATCACTTCTATGTTATCGACGCTCAGGACTTCGGCT 25115 |||||||||||||||| ||||||||||||||||| |||||||||| || ||||| |||| Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300 Query 25116 GGAACCACCCGCAAGCTCACATTCAGCTTTGGTGGGACAAAGACGCAGATGTTTTCTATC 25175 |||| ||||||||| |||| |||| ||||| || ||||||| Sbjct 301 GGAATCACCCGCAA--TCAC------------NNGGACGAAGAC------GTCTTCTATC 340 Query 25176 TGGCGCGTGTATGGAAGAAATCAGAGAACACTGCCGTTCAGGCATGGGGTGCTGTTAAGT 25235 | || || || ||||||||||| ||||||||||| || ||||| ||||| ||| ||||| Sbjct 341 TTGCTCGAGTGTGGAAGAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTAAGT 400 Query 25236 CGTGGGCTAACAAAATACCTGTCGCGTGGCCTCATGACGGTCACCAACACGAAAAGGGCG 25295 | ||| | ||||| |||||||| || |||||||| || || ||||||||||| || |||| Sbjct 401 CATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAGGCG 460 Query 25296 GTGGTGAGCAACTTAAAACCCAATATGCGGATGCCGGGTTCTCTATGCTTCCCGATCACG 25355 | |||||||| || || | ||||| || || || || ||| ||| | || || || | Sbjct 461 GCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGCATG 520 Query 25356 CAAC 25359 | || Sbjct 521 CCAC 524 >seq249728 Length=458 Score = 224 bits (248), Expect = 3e-54 Identities = 329/464 (71%), Gaps = 25/464 (5%) Strand=Plus/Minus Query 26185 CAGAATGGTTGGGAGGATTTCGCAGAAAAATACGACCTCGATGCTGATGATATTCCATCA 26244 ||| ||||||||||| ||||| ||| |||| | ||||| | || || | || Sbjct 441 CAGGATGGTTGGGAGTCATTCGCTGAAGAATATGGACTCGACCCAGACGAAAAGCCTAGC 382 Query 26245 TTCCAGAACCCCAACGATTGGGTATTTCCATGGCTGACGCAGGA-CACAATTCAGATCGC 26303 || || ||||||||||||||||| || |||||||| ||| | | | | | ||||| Sbjct 381 TTTCAATCTCCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGC 323 Query 26304 TGAGTTTTACGAAGTGGTCGAGAAGAAAGAGACGGCGTTTATCTACCAAGACCCGGTTAC 26363 ||||| ||||||||| | |||||||||||| || | |||||| | |||||| | || Sbjct 322 TGAGTATTACGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAAC 263 Query 26364 GGGTGAGCCGGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATCGACGACCTGGCTGA 26423 |||||||| || |||||||| |||||| || | ||||| Sbjct 262 CGGTGAGCCAGTTAGCTACTTCAAGCGCATGCTT------------GCCGACC------- 222 Query 26424 TAGTGGATTTATCAAAATTGCAGAGCGCCAGATTAAGCGTCGCCGGGTATACAAATCGAT 26483 |||| | | || |||| ||| ||||||| || ||| |||| || ||| |||| Sbjct 221 --GTGGCATGAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGAT 164 Query 26484 TATCACCTGCACTGCTGTACTCAAAGACAAGCAGCTC-ATTGCTGGCGAACATATCCCCA 26542 | |||| | | || ||| | |||||| ||| | || || || || ||| | || | Sbjct 163 TCTCACATCTTCCGCAGTATTGAAAGACC-GCACATTGATAGCCGGTGAGCATCTGCCGA 105 Query 26543 TTGTTCCGGTATTCGGCGAGTGGGGCTTCGTTGAAGATAAAGAAGTGTATGAGGGGGTCG 26602 |||| || || |||||||||||||| ||||| || ||||||||||| |||||||| ||| Sbjct 104 TTGTGCCAGTGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCG 45 Query 26603 TCCGCCTGACAAAAGACGGTCAGCGTCTGCGCAACATGATTATG 26646 | | ||||| |||||||| ||||| |||||||||||||||||| Sbjct 44 TTAGGCTGACGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1 >seq177630 Length=801 Score = 156 bits (172), Expect = 1e-33 Identities = 252/367 (69%), Gaps = 18/367 (5%) Strand=Plus/Plus Query 29710 CCTGAGCAACGCGCCTACGCCAACGTTAACACCTCACTGGCTGATGCAATGGCGGTGAAC 29769 || ||| ||||| | || |||||||| ||||| | || |||||| | ||| | ||| Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60 Query 29770 ATCCTGAACGTT--AAGGATGCCCGTACTAACGTGTTCTGGGCTGATGACGCCATCCGTA 29827 ||| ||||||| || | || |||||||| |||||||| ||||| | ||||||| Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118 Query 29828 TTGTGTCTCAGCCGATTCCTGCTAACCACGAATTGTTTGCAGGTATGAAAACTACCTCAT 29887 | ||||||||||| ||||| || ||| || ||||||| || |||||||| || || Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGACTTCGN 178 Query 29888 TCAGCATCCCGGATGTCGGCCTTAACGGTATCTTCGCTACGCAGGGTGATATTTCCACCC 29947 || | || || ||||| || || | ||| Sbjct 179 NNNNNNNNNNNNNNNNNNN-----------TCATGGCGACTCAGGGCGACATCGCAACCT 227 Query 29948 TGTCCGGCCTGTGCCGTATTGCGCTGTGGTACGGCGTAAACGCGACACGACCGGAAGCAA 30007 || |||| ||||||||||| |||||||| ||||| ||||| || || || ||||||| Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287 Query 30008 TCGGTGTTGGTCTGCCTGGTCAGACTGCGTAACTAACAGGGGCTTCGGCCCCTTTCTTAT 30067 |||| || || || ||||||| || || ||| | | |||||||||||||||| || | Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAA-TCAATGGGGCTTCGGCCCCTT--TTCT 344 Query 30068 TTGAGGT 30074 ||||||| Sbjct 345 TTGAGGT 351 Score = 140 bits (154), Expect = 8e-29 Identities = 206/289 (71%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 30603 CAAAGCCTAAGGCGGAAAGCGATGCAGATAAAGACTAAAGGCGATCTGGCCAGGGCGGCG 30662 ||||||| |||| || | |||||| || |||| || || || | | | ||||| Sbjct 508 CAAAGCC-AAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCGGCA 566 Query 30663 CTGCGTAAGCTTGGTGTAGCATCAGATGCAACTCTCACTGATATCGAACCTCAGTCTATG 30722 ||||| ||||| ||| | || || || || || || |||||| |||| || || || ||| Sbjct 567 CTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCAATG 626 Query 30723 CAGGATGCTGTTGACGACCTTGAAGCGATGATGGCTGAGTGGTATCAGGACGGAAAGGGA 30782 |||| | ||| ||||||| ||| |||||||||||| |||||||||||||| || Sbjct 627 GAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGAGGG 686 Query 30783 ATCATCACCGGATATATATTCTCAGATGATGATAATCCTCCCGCTGAAGGTGATGATCAC 30842 || ||||| || || || | |||| || ||||||| || |||||||| || ||| Sbjct 687 ATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGACCAC 746 Query 30843 GGTCTTCGCTCAAGCGCAGTCAGCGCAGTATTCCACAATCTGGC-CTGC 30890 | || || ||| | | ||||||||| |||| || || || |||| Sbjct 747 TCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGCACTGC 795 >seq262377 Length=537 Score = 122 bits (134), Expect = 2e-23 Identities = 228/329 (69%), Gaps = 6/329 (2%) Strand=Plus/Plus Query 31960 ATGGAGGCGTTGAGGCTCGATTCGCATGAACTGCTGATTATCCATCTCCCGCGTCATGTG 32019 |||||| | || | ||||| || || || | || ||||| || ||| | |||| Sbjct 210 ATGGAGTCCTTACGATTCGATGGTCACGAGCTAATCATCATCCACCTACCGAATGATGTA 269 Query 32020 CTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCGTACTGAAAACCGGT 32079 || || || |||||| |||| |||||||| |||||||||| | |||||||| || Sbjct 270 CTTTGCTATGACGCCTCAGCAAGTCAGAACGGTCCGCAATGGTCAATCCTGAAAACTGGA 329 Query 32080 TTATACGACGATGTTTATCGCGCCATCGATTTCATGTACGAAGGCAACCAGATTACGTGT 32139 | || || | |||| || ||||| |||||||| || || ||||||||||| || Sbjct 330 CTCTATGATACTCCGCATCGTGCTATCGACTTCATGTATGAGGGTAACCAGATTACCTGC 389 Query 32140 GGCGACAAGTCAGAAGCGGTGACAGGGCAGTTGCAATTCGACATTAGTAGT--CAGTACG 32197 || |||||| | || | ||||| ||| | | |||| | | | | | ||||||| Sbjct 390 GGAGACAAGACGCAATCTGTGACCGGGTA-TCTTAATTATGC-TCACTCATCACAGTACG 447 Query 32198 ACAAGCAGCAAGAACATCTGCTGTTTACTCCCATCTTCAAGGCTGATAAC-GCCAGATGC 32256 || |||||||||| || || | || || | ||||||||||||||| || ||| Sbjct 448 ACGCAGAGCAAGAACACCTTCTCTACACGCCACTTTTCAAGGCTGATAACAACCTGAT-A 506 Query 32257 TTCGATCTGGAAGTTGAATCCTCGACAGG 32285 |||||| | ||| | ||| | || ||||| Sbjct 507 TTCGATTTCGAATTAGAAGCATCAACAGG 535 >seq272380 Length=445 Score = 98.7 bits (108), Expect = 3e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38580 TTCAGCGTATCAAACACCATCTTCTTAACAAGTTCGGACTGCTCATCAGCAATGCGCTCT 38639 || || || || || ||||||| ||||| || || || |||||||| | | || Sbjct 246 TTAAGTGTTTCGAAAACCATCTCTTTAACCTTGTCCGATTGTTCATCAGCTAGTCTTTCA 187 Query 38640 GCTTCGTCGCGATAACCTGATACTGGAGATGGTTTAGATATAGCTTCGGTAACTATCTGC 38699 |||||||| ||||| || || || ||||||||||| | |||||| || || |||||| Sbjct 186 GCTTCGTCACGATAGCCAGAGACAGGAGATGGTTTTGCTATAGCATCTTGGACAATCTGC 127 Query 38700 ACTAATTCAGCATTCAGTGAGCGGCCATTCGATTTAGCTCGCTGTTTCAGCTTTTCCTTT 38759 | || ||||| |||| ||| || || || | | || || ||| || ||||| | Sbjct 126 AGTAGCTCAGCGTTCATTGAACGTCCGTTTGCCTCTGCGCGGAATTTGAGTTTTTCTCTG 67 Query 38760 AATTCGTAAGGTAGCCGCAGATTAAATTGCGGGTCATCTCTTCCCAT 38806 | ||| ||| | | | ||||| || |||||||||||| |||| Sbjct 66 ACTTCAAGAGGCATTCTGAAGTTAAAGTGTGGGTCATCTCTTGCCAT 20 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130609368728688