Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq22409 111 1e-19 seq38040 96.9 2e-15 >seq22409 Length=1756 Score = 111 bits (122), Expect = 1e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| || | |||| ||| || |||||||| ||||| || | | ||| |||| || | Sbjct 1456 CAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTA 1515 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 ||||||| || ||||| || | |||||||||||| | || | || ||||| || || Sbjct 1516 GCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAA 1575 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | ||| ||| || | |||| | ||| ||| || || |||| ||| |||||||| | Sbjct 1576 TTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTAC 1635 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || ||||| || || || ||||| Sbjct 1636 CCGTAAGGGTCTTGACGAAAATTTGCAT 1663 >seq38040 Length=2861 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| || ||||| |||||||| || | || |||| |||||||| || || || || Sbjct 1588 TTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAA 1647 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 ||||| ||||| || ||| | || | ||||| ||||| ||||| ||| || Sbjct 1648 AATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTTGGCTTTAACATT 1707 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | || || || || || | || || ||||| || ||||| ||||| || Sbjct 1708 TTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTAC 1767 Query 34970 AAAGATCTGCATA 34982 ||||||||||||| Sbjct 1768 AAAGATCTGCATA 1780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323554915386864