Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_017985.1 Length=40128 Score E Sequences producing significant alignments: (Bits) Value seq271029 363 4e-96 seq177630 329 8e-86 seq249728 233 5e-57 seq262377 136 1e-27 seq272271 82.4 2e-11 >seq271029 Length=527 Score = 363 bits (402), Expect = 4e-96 Identities = 408/550 (74%), Gaps = 26/550 (5%) Strand=Plus/Plus Query 24733 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 24792 |||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | | Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60 Query 24793 AGAACCCCAGCAAGTCGCAGAAAGTGGTCAACATGACCATCTATGACGCTGAGCACTATA 24852 ||||||| |||||| |||||| |||||||| ||||||||||||||||| || ||||| | Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120 Query 24853 CAGACGAGCAGAAAGAGCAAATCATCGCATCCTATCCCGAGCATGAGAGAGAGGCGCGTG 24912 | ||||||||||||||||||||||| || || ||||| ||||||||| | || ||||||| Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180 Query 24913 CTCGCGGGATTCCGACGATGGGTAGCGGTCGAATCTTCCAGATACCGGAAGAGACGATTA 24972 | || || || ||||| |||||||||||| | || | ||| ||||| ||||| || || | Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240 Query 24973 AGTGTCAGCCGTTCGAGTGTCCTGATCACTTCTACGTAATTGGCGGTATGGATTTCGGAT 25032 |||| |||||||| || ||||| |||||||||||||| || | ||| || || || | Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300 Query 25033 GGGATCACCCACAGGCGCAGGTTCAGCTTTGGTGGGATAAGGACGCAGACACAATCTACG 25092 || ||||||| || | | ||||| |||| |||| Sbjct 301 GGAATCACCCGCAATC--------------------ACNNGGACGAAGACGTCTTCTATC 340 Query 25093 TTTCACGCGTGTGGAAGGCGAAA---GAAAAAACAGCTGTTCAGGCATGGGGAGCCGTTA 25149 || | || |||||||| |||| || || || ||||| ||||| ||||| || || Sbjct 341 TTGCTCGAGTGTGGAA---GAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTA 397 Query 25150 AATCGTGGGCGCATAAAGTGCCAACCGCATGGCCTCATGACGGAAACCAGCATGAGAAGG 25209 | || ||| | | || | || || |||||||| || ||| |||| || ||||| | Sbjct 398 AGTCATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAG 457 Query 25210 GCGGCGGTGAGCAGCTCAAAGGGCAGTATGCCGACGCTGGTTTTATGATGTTGCAGGAGC 25269 |||||||||||||||| || || || ||||||||||| || |||||||| | ||||| Sbjct 458 GCGGCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGC 517 Query 25270 ATGCGACATG 25279 |||| ||||| Sbjct 518 ATGCCACATG 527 >seq177630 Length=801 Score = 329 bits (364), Expect = 8e-86 Identities = 567/827 (69%), Gaps = 40/827 (5%) Strand=Plus/Plus Query 29625 CCTGAGCAACGGGCATACGCCAACGTTAACACCTCGCTGGCTGATGCGATGGCGGTGAAC 29684 || ||| |||| | || |||||||| ||||| |||| |||||| || ||| | ||| Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60 Query 29685 ATCCTGAACGTT--AAGGATGCTCGCACCAACGTGTTCTGGGCTGATGACGCCATCCGTA 29742 ||| ||||||| || | ||| || ||||| |||||||| ||||| | ||||||| Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118 Query 29743 TTGTGTCTCAGCCTATTCCGGCCAACCACGAACTGTTTGCAGGTATGAAAACTACCTCAT 29802 | |||||||||||||||||||||||| || |||||||| || |||||||| || || Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGACTTCGN 178 Query 29803 TCAGCATCCCGGATGTCGGCCTTAACGGTATCTTCGCTACGCAGGGTGATATTTCCACCC 29862 || | || || ||||| || || | ||| Sbjct 179 NNNNNNNNNNNNNNNNNNN-----------TCATGGCGACTCAGGGCGACATCGCAACCT 227 Query 29863 TGTCCGGCCTGTGCCGTATTGCACTGTGGTATGGCGTGAACGCGACACGTCCGGAAGCAA 29922 || |||| ||||||||||| |||||||||||||| ||||| || || || ||||||| Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287 Query 29923 TCGGTGTTGGCCTGCCTGGTCAGACTGCGTAACCAACAGGGGCTTCGGCCCCTTTCTTTA 29982 |||| || ||||| ||||||| || || ||| ||| ||||||||||||||||| | | Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAATCAA-TGGGGCTTCGGCCCCTTT-TCTT 345 Query 29983 TGGAGTGGCTATGAAAATAGCAATCTATAAGCCAGGTGGAAGCGT-CATGGTATGGGGCG 30041 || || | |||| | | |||| | ||||| |||| ||| ||| || || ||||| | Sbjct 346 TGAGGTCGATATGGACACAGCAGTATATAAACCAGATGG-CCCGTGCAAAGTCTGGGGAG 404 Query 30042 TAATGGCTCAGATGAAGGTCATCGACTCCAGCGAACTTCCCGAATATGTCAAAGATGGCT 30101 | |||||||| | || || | ||| ||| || | | || ||||| || | Sbjct 405 TTATGGCTCACGTCAAAATCGTTGACCATGCCGAGGTTGATAAGCACGTTAAAGACGGAT 464 Query 30102 GGTTTAACCATCCTTCAAAGTTGCTGTCCTCGGAATCAGGCGATGCCAAGCCGCGCAAAG 30161 || | ||||||| |||||| | || | || | | |||| |||||||| Sbjct 465 GGCTAGACCATCCATCAAAGCTTCT----------TGAG--CAACCTAAGCGGCGCAAAG 512 Query 30162 GACGTAAGCCCAAGGCGGTAAGCGATGCAGATAAAGACTAAAGGCGATCTGGTCAGGGCA 30221 |||||| ||| | |||||| || |||| || || || | || | || Sbjct 513 ---------CCAAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCG 563 Query 30222 GCACTGCGTAAGCTTGGCGTGGCATCAGATGCAACTCTCACTGATGTTGAGCCACAGTCT 30281 |||||||| ||||| || | || || || || || || |||||||| |||||||| || Sbjct 564 GCACTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCA 623 Query 30282 ATGCAGGATGCCGTAGATGACCTCGAAGCGATGATGGCCGAGTGGTATCAGGACGGAAAG 30341 ||| |||| | ||| | ||||||||| ||||||||| || |||||||||||||| Sbjct 624 ATGGAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGA 683 Query 30342 GGCATCATCACCGGCTATGTATTCTCAGATGATGATAATCCTCCCGCTGAAGGTGACGAC 30401 || || ||||| ||||| | || | |||| || ||||||| || |||||||||||| Sbjct 684 GGGATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGAC 743 Query 30402 CACGGTCTTCGCTCTAGTGCAGTCAGCGCGGTATTCCACAATCTGGC 30448 ||| | || ||||| | | ||||| ||| |||| || || || Sbjct 744 CACTCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGC 790 >seq249728 Length=458 Score = 233 bits (258), Expect = 5e-57 Identities = 331/464 (71%), Gaps = 25/464 (5%) Strand=Plus/Minus Query 26100 CAGAATGGCTGGGAGGATTTCGCAGAAAAATACGACCTCGATGCTGATGATATTCCATCA 26159 ||| |||| |||||| ||||| ||| |||| | ||||| | || || | || Sbjct 441 CAGGATGGTTGGGAGTCATTCGCTGAAGAATATGGACTCGACCCAGACGAAAAGCCTAGC 382 Query 26160 TTCCAGAACCCCAACGATTGGGTATTTCCATGGCTGACGCAGGA-CACAATTCAGATCGC 26218 || || ||||||||||||||||| || |||||||| ||| | | | | | ||||| Sbjct 381 TTTCAATCTCCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGC 323 Query 26219 TGAGTTTTACGAAGTGGTCGAGAAGAAAGAGACGGCGTTTATCTACCAAGACCCGGTTAC 26278 ||||| ||||||||| | |||||||||||| || | |||||| | |||||| | || Sbjct 322 TGAGTATTACGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAAC 263 Query 26279 GGGTGAGCCGGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATCGACGACCTGGCTGA 26338 |||||||| || |||||||| |||||| || | ||||| Sbjct 262 CGGTGAGCCAGTTAGCTACTTCAAGCGCATGCTT------------GCCGACC------- 222 Query 26339 TAGTGGATTTATCAAAATTGCAGAGCGCCAGATTAAGCGACGCCGGGTATACAAATCGAT 26398 |||| | | || |||| ||| ||||||| || ||| |||| || ||| |||| Sbjct 221 --GTGGCATGAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGAT 164 Query 26399 TATCACCTGCACCGCTGTACTGAAAGACAA-ACAGCTCATTGCTGGCGAACATATCCCCA 26457 | |||| | |||| ||| |||||||| ||| | || || || || ||| | || | Sbjct 163 TCTCACATCTTCCGCAGTATTGAAAGACCGCACAT-TGATAGCCGGTGAGCATCTGCCGA 105 Query 26458 TTGTTCCGGTATTCGGCGAGTGGGGCTTCGTTGAAGATAAAGAAGTGTATGAGGGTGTCG 26517 |||| || || |||||||||||||| ||||| || ||||||||||| ||||||||| ||| Sbjct 104 TTGTGCCAGTGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCG 45 Query 26518 TCCGCCTGACAAAAGACGGTCAGCGTCTGCGCAACATGATTATG 26561 | | ||||| |||||||| ||||| |||||||||||||||||| Sbjct 44 TTAGGCTGACGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1 >seq262377 Length=537 Score = 136 bits (150), Expect = 1e-27 Identities = 360/539 (67%), Gaps = 12/539 (2%) Strand=Plus/Plus Query 31315 GCACAACCATCGTTGATGGTACAGAAGGGGATTGCCGGAACATACTGTAAAA--CGCCAT 31372 || || || || ||||||| ||||||||||| || ||||| | | || ||| || Sbjct 3 GCTCAGCCGTCACTGATGGTCCAGAAGGGGATCGCTGGAACGTTCGCCAAGTGTCGCTAT 62 Query 31373 TCGCTGATTCATATGCATTCATCAGTCACCCGGCTACTGGAGCACCTTCCGTCTACATCA 31432 || || ||| | || || | || ||||||| | || | ||||| || || | | Sbjct 63 --GCAGACTCACACGCCTTTGTTAGCAACCCGGCCAACGGGTCGCCTTCTGTTTATGTGA 120 Query 31433 TCGGGTCAGGGCAAGCTTCACCAATTGCGACGGCCAGTATTGAGAAGATTATCCGCTCAT 31492 | | ||| ||| ||| ||| | ||| |||| | || ||| || | | | Sbjct 121 TAAGCCAAGGCTCTGCTACACAAATCTCCTCGGTCAGTGTCGATAAGGTTCTGAGAAGTT 180 Query 31493 ACACAGCTGAAGAACTGGCGACTGGTGTA-ATGGAGACTTTGCGCTTCGATTCTCATGAG 31551 ||| || || |||| | |||| | |||||| | || || |||||| ||| ||| Sbjct 181 ACAGCGCCACTGATTTGGCT-CAGGTGCACATGGAGTCCTTACGATTCGATGGTCACGAG 239 Query 31552 CTTCTGATTATTCATCTCCCTCGTCATGTTCTGGTTTACGACGCATCGTCAAGCCAGAAC 31611 || | || || || || || | |||| || || ||||| || |||| |||||| Sbjct 240 CTAATCATCATCCACCTACCGAATGATGTACTTTGCTATGACGCCTCAGCAAGTCAGAAC 299 Query 31612 GGGCCGCAATGGTGCGTACTGAAAACCGGTTTATACGACGATGTTTATCGCGCCATCGAT 31671 || |||||||||| | |||||||| || | || || | |||| || ||||| Sbjct 300 GGTCCGCAATGGTCAATCCTGAAAACTGGACTCTATGATACTCCGCATCGTGCTATCGAC 359 Query 31672 TTCATGTACGAAGGCAACCAGATTACGTGTGGCGACAAGTCAGAAGCGGTGACGGGGCAG 31731 |||||||| || || ||||||||||| || || |||||| | || | ||||| ||| | Sbjct 360 TTCATGTATGAGGGTAACCAGATTACCTGCGGAGACAAGACGCAATCTGTGACCGGGTA- 418 Query 31732 TTGCAATTCGACATCAGTAGT--CAGTACGACAAGCAGCAAGAACACCTGTTGTTTACGC 31789 | |||| | ||| | | ||||||||| ||||||||||||| | | |||| Sbjct 419 TCTTAATTATGC-TCACTCATCACAGTACGACGCAGAGCAAGAACACCTTCTCTACACGC 477 Query 31790 CCCTCTTCAAGGCAGATAAC-GCCAGATGCTTCGACCTCGAAGTTGAATCATCCACTGG 31847 | || |||||||| |||||| || ||| ||||| ||||| | ||| |||| || || Sbjct 478 CACTTTTCAAGGCTGATAACAACCTGAT-ATTCGATTTCGAATTAGAAGCATCAACAGG 535 >seq272271 Length=345 Score = 82.4 bits (90), Expect = 2e-11 Identities = 167/254 (66%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 27211 TGCTGTTGCTTCAGTACTTCACACTGCTTGATGGCAAAGGCGTTGAGATGATGCGCGATT 27270 ||||||| ||||||||| | || | || || || |||||| ||||||| | ||||||| Sbjct 17 TGCTGTTACTTCAGTACCTGACGTTACTCGACGGTAAAGGCATTGAGATTACTCGCGATT 76 Query 27271 ATGCCAATAAGCAGCTTATTCAGATGGGCGTTAAGAAGCCAGAAACGCCTGAAGAGCAGC 27330 | || || |||||||| || | ||| | ||| |||| || || | || ||||||| Sbjct 77 ACGCTAACAAGCAGCTAATCGTGCAGGGACTCAAGCAGCCTGAGACAGCCGAGGAGCAGC 136 Query 27331 AATGGTTAGTAGAGGCGCAACAAGC--CAAACAAGGTCAACAAGACCCGGCAATGGTTCA 27388 | ||| | |||||| || ||||| |||| Sbjct 137 AGTGGCTGCAAGAGGCTCAGCAAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCA 196 Query 27389 GGCTCAGGGCGTACTCCTGCAGGGGCAGGCTGAACTGGCTAAAGCTCAGAACC-AGACGC 27447 |||||| ||||| | ||||| || ||||| || || ||||||||||||| | | || Sbjct 197 GGCTCAAGGCGTGTTACTGCAAGGTCAGGCAGATATGCAGAAAGCTCAGAACCAACAGGC 256 Query 27448 TGTCCCTGCAAATC 27461 || |||||||||| Sbjct 257 TG-ACCTGCAAATC 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127872657818040