Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_018275.1 Length=39783 Score E Sequences producing significant alignments: (Bits) Value seq271029 464 2e-126 seq249728 242 9e-60 seq177630 165 2e-36 >seq271029 Length=527 Score = 464 bits (514), Expect = 2e-126 Identities = 428/544 (79%), Gaps = 20/544 (4%) Strand=Plus/Plus Query 1137 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 1196 |||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | | Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60 Query 1197 AGAATCCCAGTAAGTCGCAGAAAGTGGTCAACATGACCATCTATGACGCTGAGCACTACA 1256 |||| || || ||| |||||| |||||||| ||||||||||||||||| || ||||||| Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120 Query 1257 CCGACGAGCAGAAAGAGCAAATCATCGCATCCTATCCTGAGCATGAGAGAGGGGCGCGTG 1316 ||||||||||||||||||||||||| || || ||||||||||||||| | | ||||||| Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180 Query 1317 CTCGCGGTATTCCTACGATGGGTAGCGGTCGAATATTCCAGATACCGGAAGAGACGATTA 1376 | || ||||| || || |||||||||||| | || | ||| ||||| ||||| || || | Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240 Query 1377 AGTGCCAGCCGTTTGAGTGTCCCGATCACTTCTATGTTATCGACGCTCAGGACTTCGGCT 1436 |||||||||||||||| ||||||||||||||||| |||||||||| || ||||| |||| Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300 Query 1437 GGAACCACCCGCAAGCTCACATTCAGCTTTGGTGGGACAAAGACGCAGATGTTTTCTATC 1496 |||| ||||||||| |||| |||| ||||| || ||||||| Sbjct 301 GGAATCACCCGCAA--TCAC------------NNGGACGAAGAC------GTCTTCTATC 340 Query 1497 TGGCGCGTGTATGGAAGAAATCAGAGAACACTGCCGTTCAGGCATGGGGTGCTGTTAAGT 1556 | || || || ||||||||||| ||||||||||| || ||||| ||||| ||| ||||| Sbjct 341 TTGCTCGAGTGTGGAAGAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTAAGT 400 Query 1557 CGTGGGCTAACAAAATACCTGTCGCGTGGCCTCATGACGGTCACCAACACGAAAAGGGCG 1616 | ||| | ||||| |||||||| || |||||||| || || ||||||||||| || |||| Sbjct 401 CATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAGGCG 460 Query 1617 GTGGTGAGCAACTTAAAACCCAATATGCGGACGCCGGGTTCTCTATGCTTCCCGAACACG 1676 | |||||||| || || | ||||| || ||||| || ||| ||| | || || || | Sbjct 461 GCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGCATG 520 Query 1677 CAAC 1680 | || Sbjct 521 CCAC 524 >seq249728 Length=458 Score = 242 bits (268), Expect = 9e-60 Identities = 333/464 (72%), Gaps = 25/464 (5%) Strand=Plus/Minus Query 2506 CAGAATGGTTGGGAGGATTTCGCAGAAAAATACGACCTCGATGCTGATGATATTCCATCA 2565 ||| ||||||||||| ||||| ||| |||| | ||||| | || || | || Sbjct 441 CAGGATGGTTGGGAGTCATTCGCTGAAGAATATGGACTCGACCCAGACGAAAAGCCTAGC 382 Query 2566 TTCCAGAACCCCAACGATTGGGTGTTTCCATGGCTGACGCAGGA-CACAATTCAGATCGC 2624 || || |||||||||||||| || || |||||||| ||| | | | | | ||||| Sbjct 381 TTTCAATCTCCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGC 323 Query 2625 TGAGTTTTACGAAGTGGTCGAGAAGAAAGAGACGGCGTATATCTACCAAGACCCGGTTAC 2684 ||||| ||||||||| | |||||||||||| || || |||||| | |||||| | || Sbjct 322 TGAGTATTACGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAAC 263 Query 2685 GGGTGAGCCGGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATCGACGACCTGGCTGA 2744 |||||||| || |||||||| |||||| || | ||||| Sbjct 262 CGGTGAGCCAGTTAGCTACTTCAAGCGCATGCTT------------GCCGACC------- 222 Query 2745 TAGTGGATTTATCAAAATTGCAGAGCGCCAGATTAAGCGTCGCCGGGTATACAAATCGAT 2804 |||| | | || |||| ||| ||||||| || ||| |||| || ||| |||| Sbjct 221 --GTGGCATGAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGAT 164 Query 2805 TATCACCTGCACCGCAGTACTGAAAGACAAGCAGCTC-ATTGCTGGCGAGCATATCCCCA 2863 | |||| | |||||||| |||||||| ||| | || || || |||||| | || | Sbjct 163 TCTCACATCTTCCGCAGTATTGAAAGACC-GCACATTGATAGCCGGTGAGCATCTGCCGA 105 Query 2864 TTGTTCCGGTATTCGGAGAGTGGGGCTTCGTTGAAGATAAAGAAGTGTATGAGGGTGTCG 2923 |||| || || ||||| |||||||| ||||| || ||||||||||| ||||||||| ||| Sbjct 104 TTGTGCCAGTGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCG 45 Query 2924 TCCGCCTGACAAAAGACGGTCAGCGTCTGCGCAACATGATTATG 2967 | | ||||| |||||||| ||||| |||||||||||||||||| Sbjct 44 TTAGGCTGACGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1 >seq177630 Length=801 Score = 165 bits (182), Expect = 2e-36 Identities = 254/367 (69%), Gaps = 18/367 (5%) Strand=Plus/Plus Query 6031 CCTGAGCAACGGGCATACGCCAACGTTAACACCTCGCTGGCTGATGCAATGGCGGTGAAC 6090 || ||| |||| | || |||||||| ||||| |||| |||||| | ||| | ||| Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60 Query 6091 ATCCTGAACGTT--AAGGATGCTCGCACCAACGTGTTCTGGGCTGATGACGCCATCCGTA 6148 ||| ||||||| || | ||| || ||||| |||||||| ||||| | ||||||| Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118 Query 6149 TTGTGTCTCAGCCCATTCCGGCTAACCACGAACTGTTTGCAGGTATGAAAACTACCTCAT 6208 | ||||||||||| |||||||| ||| || |||||||| || |||||||| || || Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGACTTCGN 178 Query 6209 TCAGCATCCCGGATGTCGGCCTTAACGGTATCTTCGCTACGCAGGGTGATATTTCCACCC 6268 || | || || ||||| || || | ||| Sbjct 179 NNNNNNNNNNNNNNNNNNN-----------TCATGGCGACTCAGGGCGACATCGCAACCT 227 Query 6269 TGTCCGGCCTGTGCCGTATTGCGCTGTGGTACGGCGTAAACGCGACACGACCGGAAGCAA 6328 || |||| ||||||||||| |||||||| ||||| ||||| || || || ||||||| Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287 Query 6329 TCGGTGTTGGCCTGCCTGGTCAGACTGCGTAACTAACAGGGGCTTAGGCCCCTTTTTTAT 6388 |||| || ||||| ||||||| || || ||| | | ||||||| |||||| |||| | Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAA-TCAATGGGGCTTCGGCCCC--TTTTCT 344 Query 6389 TTGAGGT 6395 ||||||| Sbjct 345 TTGAGGT 351 Score = 154 bits (170), Expect = 4e-33 Identities = 209/289 (72%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 6924 CAAAGCCTAAGGCGGAAAGCGATGCAGATAAAGACTAAAGGCGATCTGGTCAGGGCGGCG 6983 ||||||| |||| || | |||||| || |||| || || || | || | ||||| Sbjct 508 CAAAGCC-AAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCGGCA 566 Query 6984 CTGCGTAAGCTTGGTGTAGCATCAGATGCAACTCTCACTGATATCGAACCTCAGTCTATG 7043 ||||| ||||| ||| | || || || || || || |||||| |||| || || || ||| Sbjct 567 CTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCAATG 626 Query 7044 CAGGATGCTGTTGACGACCTTGAAGCGATGATGGCTGAGTGGTATCAGGACGGAAAGGGC 7103 |||| | ||| ||||||| ||| |||||||||||| |||||||||||||| || Sbjct 627 GAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGAGGG 686 Query 7104 ATCATCACCGGCTATGTATTCTCAGATGATGATAATCCTCCCGCTGAAGGTGATGATCAC 7163 || ||||| ||||| | || | |||| || ||||||| || |||||||| || ||| Sbjct 687 ATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGACCAC 746 Query 7164 GGTCTTCGCTCAAGCGCAGTCAGCGCAGTATTCCACAATCTGGC-CTGC 7211 | || || ||| | | ||||||||| |||| || || || |||| Sbjct 747 TCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGCACTGC 795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126772232102220