Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq51813 219 4e-52
seq98588 122 7e-23
seq38040 111 1e-19
seq60889 87.8 2e-12
>seq51813
Length=3444
Score = 219 bits (242), Expect = 4e-52
Identities = 587/888 (66%), Gaps = 21/888 (2%)
Strand=Plus/Plus
Query 106120 ACGCCCGTCCACCCGCGGCCGTACATGGCAACTCCTACGATTATTTTGTTGGGATCGACG 106179
||||| ||||| || || || ||||||||||| |||| | || || || |||| ||
Sbjct 462 ACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTTCTTAGGATTCACT 521
Query 106180 TCTTGTTTCAGCAACGCATCGACCGCGTAATGTGTTGTGTATTTTTCTTCGGAATTCCAA 106239
| ||| || ||| | || || | | | |||||| |||| | || ||||||
Sbjct 522 CCCTGTGCCAACAAATATTTTACTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCAT 581
Query 106240 CTAGGCGCATATACCGTCGTTTGATAGCCCAGATCTGTG-TTCGACCACGCCCCTTTAAA 106298
|||||| || | | ||||||| || ||| ||| || ||||| || || || ||
Sbjct 582 GCAGGCGCGTACAATGGTGTTTGATGTCCAAGAG-TGTCATTTGACCAGGCTCCCTTGAA 640
Query 106299 ATCGTAACTCATGAGGAAAATTTTGTCCAAATATTTTTGTGCGTCGTTATAGTTTACCAC 106358
|| || ||||| | |||||| | |||| ||| ||||| || | | |||| || ||
Sbjct 641 GTCATAGCTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAAC 700
Query 106359 GGCAATTTTGTCGTAGCCCGCGCTTATAGCGCTGGTTAATTCGTAGAATTTGCCCGTTTG 106418
||||| || | || | ||| ||||| || |||||||| ||||| | |
Sbjct 701 TTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAATTCGTATTTCTTGCCATTCTT 760
Query 106419 CAGTTCTAATTCGTCTAGCATGGCGCGCAACTCTTGCAACAGCACGACATATGTTTCGGC 106478
| | || || ||||| | || || |||| || || ||||| || |
Sbjct 761 AGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTACATAGCAATCACC 820
Query 106479 GTCGCGTTCCGCATCGCCCAAAGAAGGATTGGCCCCTTTGCCGCCTGGAAATTCCCAATC 106538
|| ||| | || | ||| || || |||||||| || ||||| ||||||||
Sbjct 821 ATC---TTCTGGGCTACCGAGGTCAGGGTTAGCACCTTTGCCACCAGGAAACTCCCAATC 877
Query 106539 TATATCGACGCCATCAAAAAATTTCCAAACTTGCAAAAATTCCTTTACAGAATTTACAAA 106598
||||| || ||||| || |||||||| | | | ||| |||||||| || | |||||
Sbjct 878 GATATCTACACCATCGAAGAATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAA 937
Query 106599 CACGT-TTCTTTT---TTCAACGTCATGCATAAAATAGAAGGGGTCTGATAGCGTCCAAC 106654
||| |||| || || | ||| | ||| | || || || | |||||||| |
Sbjct 938 T-CGTGTTCTCTTAGATTTA---TCAACTAAAAAGAAAAAAGGATCGGCAAGCGTCCACC 993
Query 106655 CGCCTATAGACGGAAGCACTTTTAAAT----GCGGATTTGCCAATTTAGCCGCCATCAAC 106710
| || ||||| ||||| | || || | |||| ||| ||||| | ||| ||
Sbjct 994 CACCAATAGAGGGAAGAATCTTCAATTCCGGGCGGGCTTGT---TTTAGT-GACATTAAT 1049
Query 106711 TGTCCAAAGTTACCCTTGTAAGGCTCGTTCCAAGCGGACACGCCTTTTTGCGGCTTCTGT 106770
|| || ||||| || ||||| ||||||||||| | |||| |||||||| || || |||
Sbjct 1050 TGGCCGAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGT 1109
Query 106771 ATGGCAGCCCAGGGATCGTGAATAGAAACTTTAAAATCGGCGCGCCCTTTGCATGATTTT 106830
| || ||||| |||||||| || || |||||||| || | || || | || || |
Sbjct 1110 AATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTCACGGCCGCTACAGGACCGT 1169
Query 106831 TGCAAAGATTCAAAACTTCCCGGTATTGTTTTTAAGGCATCGTTTATTCCATCACCGCCG 106890
|||| | || ||||| || || ||||||| || ||||| || |||||||||
Sbjct 1170 TGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTGTCATTTATGCCGTCACCGCCG 1229
Query 106891 CAGATGGGAATAAAACCGTACAATAAATGTGATAAATTGGGCAGCGGGACTTTATCTACG 106950
|| ||||||||||| || || | ||||| | | ||| || | || | ||| |||
Sbjct 1230 CAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACG 1289
Query 106951 GGAAAATTGCGGCCATACACGCCCCATTCGACAAAATACGCGGCGACA 106998
|| || || | ||| || |||||||| || || || ||| | |||
Sbjct 1290 GGGAACTTTCTAGGATAGACACCCCATTCTACGAAGTAGGCGCCCACA 1337
>seq98588
Length=355
Score = 122 bits (134), Expect = 7e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| ||||| |||| || || |||||||| ||| |||||| ||
Sbjct 114 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 173
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | || |||||| ||||||||||| | || |||||
Sbjct 174 GATACTATTGAAAACGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 233
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||| | ||||||||||| || || |||||||||||| | ||| | |||| || |||
Sbjct 234 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGACTACAAC 293
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765
|||||||||||||||||||| ||| |||||||
Sbjct 294 ATTCAAAAAGAATCTACTCTTCACTTGGTATT 325
>seq38040
Length=2861
Score = 111 bits (122), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||||||||| || ||| |||| || || ||||| || || ||| || ||
Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 2404
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| |||||| |||||||| || | || |||||||
Sbjct 2403 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 2344
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 28731
|| | ||||||||||| || || |||||||||||| || | |||| | || || |
Sbjct 2343 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTAT--CTGACTACA 2286
Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
| ||||||||||||||||| || ||| | ||| | | || |||||||| ||
Sbjct 2285 ATATTCAAAAAGAATCTACCCTTCACCTAGTACTGCGTTTGCGAGGAGGTAT 2234
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||||||||| |||||||| || || || ||||||||| ||| ||||| ||
Sbjct 2007 ATGCAAATATTTGTGAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1948
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| ||||| || || || || | ||| ||| |||
Sbjct 1947 GACACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCAA 1888
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||| | || || ||||| || || |||||||||||| | ||| || | ||||| ||
Sbjct 1887 CAGCGTCTCATATTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 1828
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| ||||| || || || ||| ||||| | | | |||||||| ||
Sbjct 1827 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGGTAT 1778
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| |||||| | || || ||||| ||||| ||| ||| ||||
Sbjct 2691 ATGCAAATTTTTGTTAAAACACTTACAGGAAAAACAATTACGTTAGAAGTTGAAGCTTCT 2632
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| ||||| |||||||| || | || |||||||
Sbjct 2631 GACACAATTGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 2572
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | | || ||||| || || ||||||||||| || | |||| || |||
Sbjct 2571 CAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGACTACAAC 2512
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||||||||| || || ||| |||| | | || |||||||| ||
Sbjct 2511 ATTCAAAAAGAATCCACCCTCCACCTGGTGCTGCGTTTGCGAGGAGGTAT 2462
Score = 87.8 bits (96), Expect = 2e-12
Identities = 93/121 (77%), Gaps = 4/121 (3%)
Strand=Plus/Minus
Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706
|||||||| || | ||| ||| |||||||| || || ||||| || |||||| |||||
Sbjct 2826 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 2767
Query 28707 GATT--CTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTAT 28764
||| | | ||||| | |||||||| |||||||| ||||||||||| || | ||||
Sbjct 2766 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 2709
Query 28765 T 28765
|
Sbjct 2708 T 2708
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || |||||||| ||| | || || ||||| || || ||| |||||| |||
Sbjct 1779 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCA 1720
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | || || ||| ||||||||||| | ||| |||||||
Sbjct 1719 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1660
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | || || || || || || || |||| ||| ||| || | || || |||
Sbjct 1659 CAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 1600
Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756
|| ||||||||||||||| ||||
Sbjct 1599 ATCCAAAAAGAATCTACTTTGCA 1577
>seq60889
Length=898
Score = 87.8 bits (96), Expect = 2e-12
Identities = 93/121 (77%), Gaps = 4/121 (3%)
Strand=Plus/Plus
Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706
|||||||| || | ||| ||| |||||||| || || ||||| || |||||| |||||
Sbjct 638 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 697
Query 28707 GATT--CTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTAT 28764
||| | | ||||| | |||||||| |||||||| ||||||||||| || | ||||
Sbjct 698 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 755
Query 28765 T 28765
|
Sbjct 756 T 756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423991275299802
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |