Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq51813 219 4e-52 seq98588 122 7e-23 seq38040 111 1e-19 seq60889 87.8 2e-12 >seq51813 Length=3444 Score = 219 bits (242), Expect = 4e-52 Identities = 587/888 (66%), Gaps = 21/888 (2%) Strand=Plus/Plus Query 106120 ACGCCCGTCCACCCGCGGCCGTACATGGCAACTCCTACGATTATTTTGTTGGGATCGACG 106179 ||||| ||||| || || || ||||||||||| |||| | || || || |||| || Sbjct 462 ACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTTCTTAGGATTCACT 521 Query 106180 TCTTGTTTCAGCAACGCATCGACCGCGTAATGTGTTGTGTATTTTTCTTCGGAATTCCAA 106239 | ||| || ||| | || || | | | |||||| |||| | || |||||| Sbjct 522 CCCTGTGCCAACAAATATTTTACTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCAT 581 Query 106240 CTAGGCGCATATACCGTCGTTTGATAGCCCAGATCTGTG-TTCGACCACGCCCCTTTAAA 106298 |||||| || | | ||||||| || ||| ||| || ||||| || || || || Sbjct 582 GCAGGCGCGTACAATGGTGTTTGATGTCCAAGAG-TGTCATTTGACCAGGCTCCCTTGAA 640 Query 106299 ATCGTAACTCATGAGGAAAATTTTGTCCAAATATTTTTGTGCGTCGTTATAGTTTACCAC 106358 || || ||||| | |||||| | |||| ||| ||||| || | | |||| || || Sbjct 641 GTCATAGCTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAAC 700 Query 106359 GGCAATTTTGTCGTAGCCCGCGCTTATAGCGCTGGTTAATTCGTAGAATTTGCCCGTTTG 106418 ||||| || | || | ||| ||||| || |||||||| ||||| | | Sbjct 701 TTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAATTCGTATTTCTTGCCATTCTT 760 Query 106419 CAGTTCTAATTCGTCTAGCATGGCGCGCAACTCTTGCAACAGCACGACATATGTTTCGGC 106478 | | || || ||||| | || || |||| || || ||||| || | Sbjct 761 AGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTACATAGCAATCACC 820 Query 106479 GTCGCGTTCCGCATCGCCCAAAGAAGGATTGGCCCCTTTGCCGCCTGGAAATTCCCAATC 106538 || ||| | || | ||| || || |||||||| || ||||| |||||||| Sbjct 821 ATC---TTCTGGGCTACCGAGGTCAGGGTTAGCACCTTTGCCACCAGGAAACTCCCAATC 877 Query 106539 TATATCGACGCCATCAAAAAATTTCCAAACTTGCAAAAATTCCTTTACAGAATTTACAAA 106598 ||||| || ||||| || |||||||| | | | ||| |||||||| || | ||||| Sbjct 878 GATATCTACACCATCGAAGAATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAA 937 Query 106599 CACGT-TTCTTTT---TTCAACGTCATGCATAAAATAGAAGGGGTCTGATAGCGTCCAAC 106654 ||| |||| || || | ||| | ||| | || || || | |||||||| | Sbjct 938 T-CGTGTTCTCTTAGATTTA---TCAACTAAAAAGAAAAAAGGATCGGCAAGCGTCCACC 993 Query 106655 CGCCTATAGACGGAAGCACTTTTAAAT----GCGGATTTGCCAATTTAGCCGCCATCAAC 106710 | || ||||| ||||| | || || | |||| ||| ||||| | ||| || Sbjct 994 CACCAATAGAGGGAAGAATCTTCAATTCCGGGCGGGCTTGT---TTTAGT-GACATTAAT 1049 Query 106711 TGTCCAAAGTTACCCTTGTAAGGCTCGTTCCAAGCGGACACGCCTTTTTGCGGCTTCTGT 106770 || || ||||| || ||||| ||||||||||| | |||| |||||||| || || ||| Sbjct 1050 TGGCCGAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGT 1109 Query 106771 ATGGCAGCCCAGGGATCGTGAATAGAAACTTTAAAATCGGCGCGCCCTTTGCATGATTTT 106830 | || ||||| |||||||| || || |||||||| || | || || | || || | Sbjct 1110 AATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTCACGGCCGCTACAGGACCGT 1169 Query 106831 TGCAAAGATTCAAAACTTCCCGGTATTGTTTTTAAGGCATCGTTTATTCCATCACCGCCG 106890 |||| | || ||||| || || ||||||| || ||||| || ||||||||| Sbjct 1170 TGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTGTCATTTATGCCGTCACCGCCG 1229 Query 106891 CAGATGGGAATAAAACCGTACAATAAATGTGATAAATTGGGCAGCGGGACTTTATCTACG 106950 || ||||||||||| || || | ||||| | | ||| || | || | ||| ||| Sbjct 1230 CAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACG 1289 Query 106951 GGAAAATTGCGGCCATACACGCCCCATTCGACAAAATACGCGGCGACA 106998 || || || | ||| || |||||||| || || || ||| | ||| Sbjct 1290 GGGAACTTTCTAGGATAGACACCCCATTCTACGAAGTAGGCGCCCACA 1337 >seq98588 Length=355 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| |||| || || |||||||| ||| |||||| || Sbjct 114 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 173 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | || |||||| ||||||||||| | || ||||| Sbjct 174 GATACTATTGAAAACGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 233 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | ||||||||||| || || |||||||||||| | ||| | |||| || ||| Sbjct 234 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGACTACAAC 293 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 |||||||||||||||||||| ||| ||||||| Sbjct 294 ATTCAAAAAGAATCTACTCTTCACTTGGTATT 325 >seq38040 Length=2861 Score = 111 bits (122), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| || ||| |||| || || ||||| || || ||| || || Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 2404 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| |||||| |||||||| || | || ||||||| Sbjct 2403 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 2344 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 28731 || | ||||||||||| || || |||||||||||| || | |||| | || || | Sbjct 2343 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTAT--CTGACTACA 2286 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 | ||||||||||||||||| || ||| | ||| | | || |||||||| || Sbjct 2285 ATATTCAAAAAGAATCTACCCTTCACCTAGTACTGCGTTTGCGAGGAGGTAT 2234 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| |||||||| || || || ||||||||| ||| ||||| || Sbjct 2007 ATGCAAATATTTGTGAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1948 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||||| || || || || | ||| ||| ||| Sbjct 1947 GACACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCAA 1888 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | || || ||||| || || |||||||||||| | ||| || | ||||| || Sbjct 1887 CAGCGTCTCATATTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 1828 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| ||||| || || || ||| ||||| | | | |||||||| || Sbjct 1827 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGGTAT 1778 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| |||||| | || || ||||| ||||| ||| ||| |||| Sbjct 2691 ATGCAAATTTTTGTTAAAACACTTACAGGAAAAACAATTACGTTAGAAGTTGAAGCTTCT 2632 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||||| |||||||| || | || ||||||| Sbjct 2631 GACACAATTGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 2572 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | | || ||||| || || ||||||||||| || | |||| || ||| Sbjct 2571 CAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGACTACAAC 2512 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||||||||| || || ||| |||| | | || |||||||| || Sbjct 2511 ATTCAAAAAGAATCCACCCTCCACCTGGTGCTGCGTTTGCGAGGAGGTAT 2462 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 |||||||| || | ||| ||| |||||||| || || ||||| || |||||| ||||| Sbjct 2826 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 2767 Query 28707 GATT--CTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTAT 28764 ||| | | ||||| | |||||||| |||||||| ||||||||||| || | |||| Sbjct 2766 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 2709 Query 28765 T 28765 | Sbjct 2708 T 2708 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || |||||||| ||| | || || ||||| || || ||| |||||| ||| Sbjct 1779 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCA 1720 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || || ||| ||||||||||| | ||| ||||||| Sbjct 1719 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1660 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | || || || || || || || |||| ||| ||| || | || || ||| Sbjct 1659 CAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 1600 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 || ||||||||||||||| |||| Sbjct 1599 ATCCAAAAAGAATCTACTTTGCA 1577 >seq60889 Length=898 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 |||||||| || | ||| ||| |||||||| || || ||||| || |||||| ||||| Sbjct 638 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 697 Query 28707 GATT--CTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTAT 28764 ||| | | ||||| | |||||||| |||||||| ||||||||||| || | |||| Sbjct 698 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 755 Query 28765 T 28765 | Sbjct 756 T 756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423991275299802