Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq59246 190 1e-43 seq157294 140 2e-28 seq10486 127 1e-24 >seq59246 Length=1357 Score = 190 bits (210), Expect = 1e-43 Identities = 255/352 (72%), Gaps = 2/352 (1%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | |||||| ||||| | |||||||| | ||||| |||| ||||||||| || Sbjct 592 CATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCGCATTTCTTCCTT 651 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 || ||| |||||||||| ||||||||| ||||| || || | ||||| |||||||| | Sbjct 652 ACCTGTG-TTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGTTCTAAGT 710 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 | || ||||| ||| | ||| |||||||||||||| ||||| ||||| | | Sbjct 711 AAATTGCAAATGCACCGGGACGTTTGTTGCCACCTTGATCTACATATCTGGCAGTATTGT 770 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGG 26171 || | ||| |||||||||| |||| ||| | |||| || || |||| | || | | Sbjct 771 TGTACACTCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAG 830 Query 26172 ATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAG 26231 | ||| | ||||||| || | ||| | ||| || ||||| || |||| ||||| Sbjct 831 ACCCTTGAGCTCTAATACAATGTGTATGTAAACCTATGCCACCTGCAGATTTAGAAATTA 890 Query 26232 CTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 |||||| | | | ||||| ||||| |||| || ||||| ||||||| Sbjct 891 ATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATACTATCGTCTTTCAT 942 >seq157294 Length=2047 Score = 140 bits (154), Expect = 2e-28 Identities = 325/482 (67%), Gaps = 16/482 (3%) Strand=Plus/Plus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 ||||||||||||||| ||| || |||||| || ||| ||||||||||| || Sbjct 1356 TTTGGACAGAATAAAGACCACTCTTCATTTTTATCTACTCGTTCCATAAATAAGTCATTT 1415 Query 25949 ATCCACATTGC-ATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||| | || || ||| | ||||| ||||| || ||||| | | | ||| ||| | Sbjct 1416 ATCCATAAAGCTATGAAA-ACGTCTCTAGCTCTAATGTCTTCACTGCTGGTATTTTTTCT 1474 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 || |||||||||||| ||||| ||| |||||| ||||||||||| || || | ||||| Sbjct 1475 TAAATCTAAGAAATCGAAAATGTCTTTGTGCCAAGGTTCTAAATAAATTGCGACACTACT 1534 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | |||||| | ||| ||||||| || ||| || || | ||| | |||| | || Sbjct 1535 TGATCTTTTACTTCCGCCTTGATTTATATATTTTCTGGTATAATTCATGACTTGTATCAG 1594 Query 26128 TGGAACTAATCCAGTTGA--AAATCCGTTTG-TGCTATGAATCTTGGATCCTGTCGATCT 26184 ||||| || ||| | || ||| | ||||| || | ||||| | ||| Sbjct 1595 TGGAATTATTCC--TCGACTCTTTCCACCGGCAGCTATTAA-ATCCGATCCATTACTTCT 1651 Query 26185 AATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGA 26244 |||| ||| || || || |||||||| | |||| ||||| |||| || | | Sbjct 1652 AATACTGTGCAAATTGATGCCTATTCCACCGGAATATTTAGAAATGACTGCGCACTGTTT 1711 Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATT----CCTAATAAAAAACAAG 26300 | || || |||||| || ||| ||| |||| | | | |||||||||| Sbjct 1712 TATAGTGTCATAAATTCTTTCTATTGAATC----TTCAATAGGACTCATTAAAAAACAAC 1767 Query 26301 AAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAAT 26360 | ||||| || |||| | ||||| ||||| || |||||||| ||||| ||| Sbjct 1768 TTGCCAATTGTGACCTGTTTGTACACGAATTTAATAAAGTTGGTGTAGCGTGAGTGAAAT 1827 Query 26361 AT 26362 || Sbjct 1828 AT 1829 Score = 125 bits (138), Expect = 4e-24 Identities = 299/443 (67%), Gaps = 8/443 (2%) Strand=Plus/Plus Query 24689 GGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGC 24748 ||| ||||||| | |||||||||||| ||||| ||| | || || | ||||||||| Sbjct 197 GGTCTAGTTCTCAAATAATACATTCCTGTTTTTAATCCACTTTTGTAAGCATAAAAATGC 256 Query 24749 ATTGATGTTAGTTTTGCA-ATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTG 24807 || | | ||||| | ||||| | || | | || || || | ||||| | || Sbjct 257 ATACTACTCAATTTTGAATATGTTGGTTGCG-CAACGAATAAATTTAGTGATTGTGACTG 315 Query 24808 GCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTA 24867 || ||| |||| | ||||| || || ||||| | ||||||| || | | Sbjct 316 ATCAATGAAAAGTTGACGGTCTGCCGCCAAATCAATTACATTTTTCATTTTAATTTTCCA 375 Query 24868 AGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCC 24927 |||||||||||| | ||| || ||| |||| ||| || ||||||||||| ||| || Sbjct 376 AGCTGTTTTGTAAAGTTTTTTAATGTCATTTGGTATATTTTTAATATTTTGAATTGAACC 435 Query 24928 ATTTTCTCTCAATAGATTCAA--TCTCATATTCGGTGTCCA-AAGATTAATTTTTTCAAG 24984 | | | ||||| |||| || | |||| | ||| ||| ||| ||||||| | || Sbjct 436 TTCATAT-TCAAT-GATTAAATTTTTCATTTCATGTGACCACAAGTTTAATTTAATTAA- 492 Query 24985 ATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGA 25044 |||| | | ||| | || ||| | || ||||||| |||| ||| || | | Sbjct 493 ATCTTTCAACAAATATTCATTGACAATTTTAAATTCACCAGCATGTGTTCTCCTCGTGTA 552 Query 25045 TAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGC 25104 | ||| ||||| || |||||||||||||||||||| || ||||| || ||| || Sbjct 553 AATGTTGGAAGTAAAAGGTTCAAAACATTCATTATTATTAAATATTTGTGAGGTACTGGC 612 Query 25105 TGTTGGCATTAATGCTATTAATA 25127 || ||||| || ||||||| Sbjct 613 GGTAGGCATAGGAGCAATTAATA 635 >seq10486 Length=2602 Score = 127 bits (140), Expect = 1e-24 Identities = 351/525 (67%), Gaps = 16/525 (3%) Strand=Plus/Plus Query 24649 ATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGT-TCTAAGATA 24705 ||||| |||| |||| ||||| || |||| | |||||||||| || | |||| || Sbjct 1921 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGTGTAAG-TA 1979 Query 24706 ATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGC 24765 |||||||| ||||| || | |||||||| ||| ||||| || || |||||||| | Sbjct 1980 GTACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCC 2039 Query 24766 AATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCT 24825 | ||| | | | | | | ||| | |||||| |||| | ||| ||| Sbjct 2040 ATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCCCCTCT 2099 Query 24826 ATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTC 24885 ||| || || | | ||| ||||||| || || || | | ||||||||| || Sbjct 2100 ATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTATAAATC 2159 Query 24886 TTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AATA-G 24942 | |||| || | || || || |||| | ||| | |||||||| || | | |||| | Sbjct 2160 TCTTATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 2219 Query 24943 ATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAGTGTT 25001 ||| | |||||| ||| | || | | |||| ||| | | | || | Sbjct 2220 ATT---TTTCATATCTTCATCCCATAAATCAGCTAGAGTCAA-ATCAGTCAGAAGATGAT 2275 Query 25002 TATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAGTGAA 25059 || | | | |||||||||||| || |||||||| ||| ||| ||||| || || Sbjct 2276 GGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCT--TTGGTAAATATTTGATGTAAA 2333 Query 25060 TGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGC 25119 |||||||||| ||||| | || || | ||||| | |||||| || || ||||| ||| Sbjct 2334 TGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGC 2393 Query 25120 TATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164 ||| ||||| ||||| | |||||||| ||| | |||| || ||| Sbjct 2394 TATCAATAGAGAATTCCGCAAACCATGTTTTGCTATCTTTTCTTT 2438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252199204855850