Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq157294 176 5e-39 seq59246 141 1e-28 >seq157294 Length=2047 Score = 176 bits (194), Expect = 5e-39 Identities = 628/959 (65%), Gaps = 32/959 (3%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||||| || ||| | || |||| || || || ||||| ||||||||||| || || Sbjct 1252 TGGAAAGCCATTATAGAAGCACAATTAGAAACGGGTACACCTTATATGCTTTATAAAGAC 1193 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 ||||||||| | ||||| ||| | ||||| || ||||| || ||||||||||| Sbjct 1192 ACTTGTAACAGGCTAAGTAATCAACAAAATTTAGGTACAATAAAATCTTCAAATCTTTGT 1133 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGC-ATCAAT 76056 |||||||| | || || | || || |||| | || ||||| |||||||| | || | Sbjct 1132 GCGGAAATTATCGAATATTCTGACAAAAATGAAATAGCAGTTTGTAATTTGGCGAGCATT 1073 Query 76057 CGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACT---TCA 76113 | | |||| | ||||| ||| || | ||||| | ||||||||| || Sbjct 1072 TG-TTTGTCAAAATTTGTCATTGATGA------AAAATTTGACTTTGAAAAACTATCGCA 1020 Query 76114 TGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCC 76173 | | | |||| | |||| | |||||| ||| || || || | || |||||||| Sbjct 1019 AGTAGT--TAAAG-TAATTACAAGAAATCTTAACAGATGTATAGATACAACATTTTATCC 963 Query 76174 CGTTG-AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAG 76232 |||| ||| || ||| ||||||| ||||||||||||| || | ||| | || | Sbjct 962 TGTTGAAGAATG-TAGAAGAAGTAATATGAGACACAGACCTATAGGAATTGGTATACAGG 904 Query 76233 GTCTCGCGGATGTA-TTTATTTTGTGCCGCTACGCATTTGATTCAG--ATGAAGCCAAGG 76289 | || || |||| | ||| || || | || || ||||| ||| | ||||| | | Sbjct 903 GACTAGCAGATGCATTTTGCCTTATG-AGATATGCGTTTGA--CAGTCAAGAAGCAAGAG 847 Query 76290 AGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAAT 76349 | | ||| | || |||||||| |||||| | || |||| | || ||||| Sbjct 846 ACTTAAATTCAAAAATATTTGAAACGATGTATTTTTCTGCCTTGGAAGAAAGCGTTGAAT 787 Query 76350 TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGC 76409 |||| ||| || | || || ||| ||| |||| | || | ||||| | Sbjct 786 TGGCGAAAGAATTTGGACCATACGAATCATATGAAGGTT-TGCCTATTAGCAAGGAATTT 728 Query 76410 TTCAGTTTGATATGTG-GGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTCAAG 76468 |||| ||||| |||| |||| || | || || | | ||||| ||| | Sbjct 727 TTCATTTTGAATTGTGCGGAAAAAAAATTCCAG-ACATGGA-AAATGGGAAAATCTTA-- 672 Query 76469 GAA--CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAG 76526 ||| || || | | || || | || ||| | || || || || ||||| || | Sbjct 671 GAATTAAAATAAAAAATCACGGCGTTAGGAATAGTTTATTAATTGCTCCTATGCCTACCG 612 Query 76527 CCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCT 76586 || ||| ||||||| || |||||||||||| |||||||| | || | ||||| | Sbjct 611 CCAGTACCTCACAAATATTTAATAATAATGAATGTTTTGAACCTTTTACTTCCAACATTT 552 Query 76587 ACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACC 76646 || ||| ||||| | || ||||| ||| |||||||| | | | | || || Sbjct 551 ACACGAGGAGAACACATGCTGGTGAATTTAAAATTGTCAATGAATATTTGTTGAAAGA-T 493 Query 76647 TCAAGAAGATTGGTC-TCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGT 76705 | || | ||| | | ||||| | || ||||| || | || | || | ||| Sbjct 492 TTAATTAAATTAAACTTGTGGTCACATGAAATGAAAAATTTAATCATTGAATATGAAGGT 433 Query 76706 TCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGG 76765 || ||||||||||| | |||| ||| |||| || || || || ||| |||| ||| Sbjct 432 TCAATTCAAAATATTAAAAATATACCAAATGACATTAAAAAACTTTACAAAACAGCTTGG 373 Query 76766 GAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCA 76824 |||| || |||||| |||| ||||| |||| ||||| ||| | ||||||||||| Sbjct 372 AAAATTAAAATGAAAAATGTAATTGATTTGGCGGCAGACCGTCAACTTTTCATTGATCA 314 >seq59246 Length=1357 Score = 141 bits (156), Expect = 1e-28 Identities = 429/658 (65%), Gaps = 26/658 (4%) Strand=Plus/Minus Query 75608 TACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGT 75667 ||||| ||||| |||||||| || || | |||||| | || ||| | ||| |||| Sbjct 711 TACTTAGAACCTTGGCATGCGGACATATTTGAGTTCTTAGATTTAAAAAAGAACACAGGT 652 Query 75668 GACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATG 75727 | ||||| || |||||| || |||| | | ||||| ||||| || || ||| Sbjct 651 AAGGAAGAAATGCGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATG 592 Query 75728 AAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTC 75787 || |||| || ||| || | ||| ||| | ||||| | | || || || Sbjct 591 AAAAGGGTAGAAAAGGATGAAGATTGGAGTCTCATGTGTCCTCATGATTGTCCCGGCCTT 532 Query 75788 TCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAG----GG 75843 | ||| || ||||| || |||| || || | || |||||||| || || Sbjct 531 GCTGACTGTTATGGAGAGGAATTCGAAGAACTATATGCCAAATATGAAGAAGAAAAACGG 472 Query 75844 TAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGAC 75903 | | || | | | ||| || | |||||| | ||| | || | || Sbjct 471 TTTATAAAACAAGTCAG----AGCTCAAGAGTTATGGAAGTCAATTATAGAAGCTCAAGT 416 Query 75904 GGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAA 75963 ||||||||| |||||||||||| | || ||||||||||| |||| ||||||||| ||||| Sbjct 415 GGAGACTGGTACACCATATATGTTGTATAAGGATGCTTGCAACAGGAAGAGTAATCAAAA 356 Query 75964 GAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACA---CAGA 76020 ||| | || || || || | ||||||||||| || || | | |||| |||| Sbjct 355 AAATCTTGGCACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGA 296 Query 76021 TAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGA 76080 | |||| ||| || ||||| | || || || || ||| | || ||| ||| Sbjct 295 AA---ATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGT---TGA 242 Query 76081 AGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAA 76140 | | | || ||| ||| | ||||| | | |||| ||| |||||||| || |||| Sbjct 241 AAATAATC---AATTTCATTTTAAAAAATTAAAAGAAACCACTAAGATTGTGACTCAAAA 185 Query 76141 TCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAA 76197 | ||||| ||||||||| || |||||||| || ||| || || || || Sbjct 184 TTTAAACAAAGTCATTGATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAA 128 Query 76198 TATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG 76255 |||| | ||| | ||||| ||| | |||||||| ||| | || ||| |||| | ||| Sbjct 127 TATGAGGCACCGTCCTATCGGTATTGGTGTTCAGGGTATGGCAGATACATTTGTGTTG 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594536505717440