Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq38040 159 6e-34 seq49094 134 2e-26 seq22409 116 7e-21 seq60889 104 4e-17 >seq38040 Length=2861 Score = 159 bits (176), Expect = 6e-34 Identities = 177/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||| ||| || ||||| || || | |||| ||||| |||||| Sbjct 2228 ATTTGCATACCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTG 2287 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| |||| || | | ||| || ||||| || || ||||| || | | |||||| Sbjct 2288 TAGTCAGATAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGA 2347 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || |||||||| ||||| ||||| | |||| |||| ||| || || || Sbjct 2348 TCTGGAGGGATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAT 2407 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || ||||||||||| || || |||||||| || || |||||||||||||| Sbjct 2408 GGCTCCACCTCTAGAGTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2463 Score = 156 bits (172), Expect = 8e-33 Identities = 176/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||| || || ||||| ||||| | |||| ||| || || || Sbjct 2000 ATTTGCATACCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTG 2059 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| ||||| || | ||| || || || || |||||||| || | | |||||| Sbjct 2060 TAGTCAGATAAGGTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGA 2119 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || || ||||||||||| || || | |||| ||| ||| ||||| || Sbjct 2120 TCTGGAGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTATCAGAT 2179 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || |||||||||||||| || |||||||| || || |||||||||||||| Sbjct 2180 GGCTCCACCTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2235 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| |||| || || ||||||| || | || | |||||| |||||| || || Sbjct 1778 ATACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCA 1837 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | | ||| || ||||| || || ||||| || | | |||||| || || Sbjct 1838 GACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGG 1897 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| |||||||| | || | ||| || || || || | || Sbjct 1898 GGGATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCT 1957 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || ||||| | ||||| |||||||||||||| Sbjct 1958 ACTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 >seq49094 Length=1117 Score = 134 bits (148), Expect = 2e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| || | || || |||| ||||| || | || || |||||| Sbjct 237 AATTTGCATTCCACCCCTAAGGCGTAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATT 178 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | ||| || | ||| |||||||| ||||||||||| ||||| Sbjct 177 ATAGTCTGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTG 118 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || ||||| || || | |||| || || ||||| || Sbjct 117 ATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTCTCGATTGTATCAGA 58 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| | || |||||||| || || || ||||| ||||| |||||||| Sbjct 57 AGCTTCCACTTCCAATGTGATAGTTTTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1 Score = 113 bits (124), Expect = 8e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 193157 ATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTG 193216 |||||| |||| || || || |||||||| || | || | ||| || | ||| Sbjct 1116 ATGCAAAGTAGATTCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTTG 1057 Query 193217 TTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTT 193276 ||||| || ||||| ||||| ||||| || ||||| || ||||| || ||||| || || Sbjct 1056 CTTTCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCTT 997 Query 193277 GGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGT 193336 | || | |||| || || || |||| || || |||| ||| ||||||||||| || Sbjct 996 TGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAGT 937 Query 193337 TAGCGTTTTTACAAATATTTGCATT 193361 || ||||| || || ||||||||| Sbjct 936 CAGTGTTTTAACGAAAATTTGCATT 912 >seq22409 Length=1756 Score = 116 bits (128), Expect = 7e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 193148 AAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATC 193207 ||| || ||||||||||| | || || ||| || ||||| || || || | ||| Sbjct 1451 AAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATC 1510 Query 193208 GTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 193267 |||| ||||| || ||||| || || | || || || || || || ||||| ||||| Sbjct 1511 TTCTAGCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATC 1570 Query 193268 TTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGT 193327 ||| ||||| | ||||| |||| |||||||| || | || || || || || || || Sbjct 1571 TTGAATTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGT 1630 Query 193328 TTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||||| || || || || || || ||||||||| Sbjct 1631 TTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 1664 >seq60889 Length=898 Score = 104 bits (114), Expect = 4e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 |||||||| ||||| || |||||||| ||||| ||||| | |||| |||| ||| || Sbjct 894 TGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTG 835 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || | ||||||||||| || || ||||| || || || ||||| ||||| |||||| Sbjct 834 TCAGAGGCCTCAACTTCTAACGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGC 775 Query 193359 AT 193360 || Sbjct 774 AT 773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896588400296160