Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq98588 167 5e-36 seq38040 149 1e-30 seq22409 129 1e-24 seq80369 127 4e-24 seq60889 127 4e-24 seq55316 127 4e-24 seq49094 120 6e-22 seq210326 107 4e-18 >seq98588 Length=355 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| ||||| || || | ||||| ||||| || || || || Sbjct 343 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCG 284 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||||||| |||||||||||||| | | ||| ||||||||| Sbjct 283 GAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGT 224 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| |||||| |||||| || |||| ||| || | ||| Sbjct 223 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCC 164 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||||||||| || ||||||| ||||||| ||| |||||||| Sbjct 163 ACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq38040 Length=2861 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| |||| ||||| | ||| || || | || | |||||| ||||| |||||| Sbjct 1778 ATACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCA 1837 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || |||| |||||||| ||||||||||| || | | |||||| || || Sbjct 1838 GACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGG 1897 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| ||||||||| || ||||| || | || || | |||| Sbjct 1898 GGGATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCT 1957 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || |||||||| || || || |||||||| | |||||| ||||| Sbjct 1958 ACTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 Score = 136 bits (150), Expect = 8e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| |||| | ||| | ||||| || | |||| ||||| ||||| || ||| Sbjct 2234 ATACCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCA 2293 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| || || |||| |||||||| |||||||||||||| | | |||||||| || Sbjct 2294 GATAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGA 2353 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| |||||| |||||||| || | || || | || Sbjct 2354 GGGATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGATGGCTCC 2413 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||||||| ||||| || || |||| ||| || | |||||| ||||| Sbjct 2414 ACCTCTAGAGTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2463 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||||||| ||| | ||| | |||| ||| || ||| || || ||| Sbjct 2006 ATACCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCA 2065 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| || || |||| ||||| || || || |||||||| | | |||||||| || Sbjct 2066 GATAAGGTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGA 2125 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||||||||| || ||| ||||| || || | ||| || | || Sbjct 2126 GGAATACCCTCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTATCAGATGGCTCC 2185 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||||||| || || || || |||| ||| || | |||||| ||||| Sbjct 2186 ACCTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2235 Score = 127 bits (140), Expect = 4e-24 Identities = 118/147 (80%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365 ||||| || | |||||| ||||||||||||| ||||| | |||| || ||||||||||| Sbjct 2690 ATACCGCCGCGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGA-ATATTATAATC 2748 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||||| ||| || |||| |||| |||||| |||||||| || | |||||||| || || Sbjct 2749 AGATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGG 2808 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTT 192452 || || |||||||| ||||| || || Sbjct 2809 GGGAATACCTTCTTTGTCTTGGATCTT 2835 >seq22409 Length=1756 Score = 129 bits (142), Expect = 1e-24 Identities = 144/191 (75%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || || || ||||| ||||| ||| |||| || | |||||||||||||||| Sbjct 1475 CTTTTGA-ATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAGA 1533 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | || | || || || ||||| || ||||| |||||||| ||||| ||||||||| Sbjct 1534 TCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTCGCTTTTACATTTT 1593 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 ||||| ||| || | ||| || || || |||||||||||||| || | || || | | Sbjct 1594 CTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGA 1653 Query 192527 ATATCTGCATT 192537 | || |||||| Sbjct 1654 AAATTTGCATT 1664 >seq80369 Length=3501 Score = 127 bits (140), Expect = 4e-24 Identities = 138/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| |||||||||| |||| |||| || | ||| |||||||||||||| | || Sbjct 375 GATATTGTAATCAGATAGCGTTCTAGCATCCTCGAGTTGCTTACCAGCAAAGATAAGCCT 316 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||| ||||| || || || || |||| ||| || ||||||||| |||| Sbjct 315 CTGCTGATCTGGTGGAATGCCCTCCTTGTCTTCTATCTTTGCTTTTACATTCTCGATAGT 256 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || |||||||| | || || || || || ||||||||||||| ||| ||||| Sbjct 255 ATCACTAGACTCTACTTCCAATGTTATTGTCTTTCCTGTTAATGTTTTAACAAAGATCTG 196 Query 192534 CAT 192536 ||| Sbjct 195 CAT 193 >seq60889 Length=898 Score = 127 bits (140), Expect = 4e-24 Identities = 118/147 (80%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 ||||| || | |||||| ||||||||||||| ||||| || ||| || ||||||||||| Sbjct 774 ATACCGCCGCGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGA-ATATTATAATC 716 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||||| ||| || |||| |||| |||||| |||||||| || | |||||||| || || Sbjct 715 AGATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGG 656 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTT 192452 || || |||||||| ||||| || || Sbjct 655 GGGAATACCTTCTTTGTCTTGGATCTT 629 >seq55316 Length=1040 Score = 127 bits (140), Expect = 4e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 50106 ATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAAT 50165 ||||||||||| ||||| || ||||| ||| |||||| || |||||||| ||| || Sbjct 790 ATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATTGCAATTTGAAACCCATAGAAG 731 Query 50166 TGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACA 50225 || ||||| | ||||| || |||| || || ||||| |||||| ||| Sbjct 730 CACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACTAAGTTCTCATTAACA 671 Query 50226 ATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCT 50285 ||||||||||| || || ||||||||||| || | ||| ||||||||||| || |||| Sbjct 670 ATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAATGTTTCTCGCAATCT 611 Query 50286 TTTAAATTTTCCCAA 50300 ||||| | |||||| Sbjct 610 TTTAATGTCTCCCAA 596 >seq49094 Length=1117 Score = 120 bits (132), Expect = 6e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 192332 AATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATT 192391 |||| ||||||| || || ||| ||||| ||||| | ||| || |||| |||| || Sbjct 1117 AATGCAAAGTAGATTCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTT 1058 Query 192392 GTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTT 192451 | || ||||| || || ||||| ||||| || || || || ||||| || ||||| || | Sbjct 1057 GCTTTCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCT 998 Query 192452 TATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAG 192511 | || ||||| || | || || | ||| || |||| |||||| |||||||||| Sbjct 997 TTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAG 938 Query 192512 TTAATGTTTTAATAAATATCTGCATT 192537 | | |||||||| || || |||||| Sbjct 937 TCAGTGTTTTAACGAAAATTTGCATT 912 Score = 111 bits (122), Expect = 3e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || ||||| || | || || || ||||| | || || ||||||||||| Sbjct 686 ATTCCCCCCCTAAGGCGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCT 627 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | ||||| || ||||| || | |||||||| || || Sbjct 626 GACAGCGTACGACCATCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGA 567 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| || ||||| ||| | ||| || | ||| Sbjct 566 GGAATACCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 507 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | ||||| ||||| ||||| | ||| || | ||| || |||||| Sbjct 506 ACTTCCAATGTAATCGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 456 >seq210326 Length=301 Score = 107 bits (118), Expect = 4e-18 Identities = 100/127 (79%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905 |||| |||||||| |||| |||||| || ||||||||||| ||||| ||||||| |||| Sbjct 29 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAATCCTCGTTTTT 88 Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965 | | |||||||||||| ||||| || | || || ||||| |||| || |||||| | Sbjct 89 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTTCCTCAACTGCCGCAAAAG 148 Query 49966 CTATTAT 49972 | || || Sbjct 149 CGATAAT 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981041039691300