Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq76104 165 2e-35 seq59246 134 4e-26 seq3260 129 2e-24 seq56742 91.5 4e-13 >seq76104 Length=2766 Score = 165 bits (182), Expect = 2e-35 Identities = 346/503 (69%), Gaps = 22/503 (4%) Strand=Plus/Minus Query 288849 CCTATCAAACCTACCAGAACGAGTTAAT---GCTGGGTCTAATATATCGGCTCTGTTTGT 288905 ||||||||| ||||||| | ||||| ||| |||||| || || ||||||| || Sbjct 1561 CCTATCAAATCTACCAGGTC---TTAATAGGGCTTTGTCTAAAATGTCCACTCTGTTAGT 1505 Query 288906 TGCTGCCAATACAACAATAGATTCGGT-TTGC-TTAAATCCATCCATACTTGTTAAAATT 288963 || || ||||| |||| | || | | ||| || || |||||||| | || || | Sbjct 1504 AGCAGCTAATACTACAACA--TTGGTTGTTGTATTGAAACCATCCATTTCTACTAGAAGT 1447 Query 288964 TGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAA--TCACCCGAATCGCTCC 289021 |||||||| || | ||| ||| || ||||| || || || || ||| Sbjct 1446 TGATTAAGAGTGTTTTCTTGTTCTGAATG---ACCTCCAAAACTTCTACC---TC-CTC- 1395 Query 289022 tttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCG 289081 ||||| ||||||||||||| ||||| |||||||| | | ||| |||| || || | | Sbjct 1394 TTTTTCTACCAACAGCATCTATTTCATCAATGAATAATATACAGGGAGCATGTTTCCGAG 1335 Query 289082 CAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATT 289141 | || | || | || || || | || | |||| ||| ||| ||||||||| ||| | Sbjct 1334 CCATAGAGAACATATCCCTGACTCTAGAGGGACCAACACCGACAAACATTTCTAAAAACT 1275 Query 289142 CAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAA 289201 | ||| | |||||| ||||| | ||||| || || |||||| ||| | || | || Sbjct 1274 CTGAACCAGATACTGTTATGAAGGGAACATTAGCCTCTCCTGCTGTTGCTTTGGCTAAAA 1215 Query 289202 GTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCA 289260 | || ||||| |||||||| ||||| ||||| | |||| || || | ||| || || | Sbjct 1214 GAGTTTTACCAGTTCCAGGGGGTCCTGTTAATAAAGCTCCTTTAGGAATTTTAGCTCCTA 1155 Query 289261 GCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTT 289320 | | |||| | || |||| | || ||||| | ||||| |||| || |||| || Sbjct 1154 GGTCA-ATATACTGCTGAGGGTTTTTCAAAAAGTTTACAAATTCCATAATTTCAATCTTA 1096 Query 289321 GCCTCATCACATCCTGCTACATC 289343 || || ||||| || || ||||| Sbjct 1095 GCTTCCTCACAACCAGCAACATC 1073 >seq59246 Length=1357 Score = 134 bits (148), Expect = 4e-26 Identities = 626/977 (64%), Gaps = 40/977 (4%) Strand=Plus/Plus Query 155399 AAATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCT 155458 |||||| || || | ||||||||| |||||||||| || || ||||| ||| | Sbjct 76 AAATGTATCTGCCATACCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGT 135 Query 155459 GCTTGTCTTCTTGTTTGGG-TAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCA 155517 ||| |||| | || ||||| || |||||||| | || ||||||||| | || Sbjct 136 TTTTG-CTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCA 194 Query 155518 ATACCTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACA 155577 | ||| || ||| |||||| | | | |||| |||| ||| ||||||| Sbjct 195 CAATCTTAGTGGTTTCTTTTAATTTTTTAAAATGAAATTGATTATTTTCA---ACAAACA 251 Query 155578 TACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTA 155637 | ||| | || || || || || || || || || || || |||||| | Sbjct 252 TGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATTTTCTGAAGTGTATTGCA 311 Query 155638 CAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTAC 155697 ||| |||| ||| || || || || || ||||| | ||| || || ||| || | Sbjct 312 CAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCC 371 Query 155698 TGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAA 155757 |||| ||||||||||| || | || ||||| || || ||||||| || || || | || Sbjct 372 TGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAA 431 Query 155758 T---CTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCC----TTCCGAC 155810 | ||| ||| | || | || | | |||||| ||| || ||| Sbjct 432 TTGACTT---CCATAACTCTTGAGCTCTGA----CTTGTTTTATAAACCGTTTTTCTTCT 484 Query 155811 TCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 |||||||| |||||| | |||| | ||||| || ||||| ||| || || || | Sbjct 485 TCATATTTGGCATATAGTTC-TTCGA-ATTCCTCTCCATAACAGTCAGCAAGGCCGGGAC 542 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTC--CATAAATAC 155926 | | || || || | || |||| || || || || || || |||||| | Sbjct 543 AATCATGAGGACACATGAGACTCCAATCTTCAT--CCTTTTCTACCCTTTTCATAAACAG 600 Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC---CTTTGACTCCTCATCGCCGTG 155983 ||| ||| | |||||| || || || || || | || |||| | | ||| Sbjct 601 ATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCGCATTTCTTCCTTACCT--GTG 658 Query 155984 ATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGC 156043 ||||| || |||||||| || || || | ||| || || | || || || Sbjct 659 -TTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGTTCTAAGTAAATTGC 717 Query 156044 AAAACTACCATTCC---TCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGAC 156100 ||| ||| | | |||||||| ||||||||||| | ||||| || ||| | || Sbjct 718 AAATGCACCGGGACGTTTGTTGCCACCTTGATCTACATATCTGGCAGTATTGTTGTACAC 777 Query 156101 ACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGA 156160 | | ||| || | | |||||| ||| ||||| || || |||| || || Sbjct 778 TCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACCCT-- 835 Query 156161 TGAGCG--AACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCG 156218 ||||| || | ||| |||||| || || ||||||| ||||||||||| || Sbjct 836 TGAGCTCTAATACAATGTGTATGTAAACCTATGCCACCTGCAGATTTAGAAATTAATGCA 895 Query 156219 CATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAG 156278 |||| |||| ||||| ||||||||||||||| ||| |||| ||| | || || || Sbjct 896 CATTGTTTTAAAGTATCAAAAATACCTTCAATACTATCGTCTTTCATAGCTATAAGGAAG 955 Query 156279 CACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATA 156338 || || | || || || ||||| | || ||| | |||||| ||||||| || Sbjct 956 CAGGAGGAAAGCTGTGGCCGCGGTGTAGCTGCTGAGAACAATGTAGGGCTTGCATGTGTA 1015 Query 156339 AAATACTTATTAGACAT 156355 ||||| || | ||||| Sbjct 1016 AAATATTTCTCTGACAT 1032 >seq3260 Length=4440 Score = 129 bits (142), Expect = 2e-24 Identities = 203/291 (70%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||||||| | ||||| ||||||| ||| ||||||||||||||||| |||||||| Sbjct 1833 ATCATAATGTACCATAACAGATTCCATAGCCTTTATTAAACGACGCTGAATGTAACCAGT 1774 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | || |||||||| || |||||||| ||||| ||||||| ||||| || ||||| | Sbjct 1773 TTCAGCAGTTTTTACCGCAGTATCAATGAGACCTTCACGACCTCCCATGGCGTGGAAATA 1714 Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732 | ||| ||| | || ||| | || | || |||||||| | | || || Sbjct 1713 AAACTCAGAAGGTGTCAAGCCAGCAAGGTATGAATTTTCGACGAAACCTCTAGATTCTGG 1654 Query 302733 CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACG 302792 || ||| ||| |||| ||||||| || || || | | ||| | || ||||| Sbjct 1653 ACCATAATCGTCTTTGATAAAATGTGGCAATGTTCTTTTACGAAAACCGAAAGGAATACG 1594 Query 302793 CTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 |||||| ||||||||||| || || | || | ||| | ||| || || || Sbjct 1593 CTTTCCTTCAACGTTCTGTTGCCCTACACAAGCAATAACCTGTGAGATGTT 1543 >seq56742 Length=3759 Score = 91.5 bits (100), Expect = 4e-13 Identities = 121/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 252530 TATCCATCCTATTATCATAATTTGTAACATACATACCAAGCGCCTGCTTTCCCATAGCAC 252589 ||||||| ||| || | || |||| |||| ||| | || ||||| |||||||||| Sbjct 2552 TATCCATTCTAACATGGAAGTTAGTAATGTACACACCCATAGCTTGCTTACCCATAGCAC 2493 Query 252590 TCTGGTAAGTATTTCTGGGAGACTGATTGTTTTCCGGGAAAGGAATGCATGATGCTACA- 252648 | || || || |||||||| ||||||| || ||||| ||||| |||||| ||| Sbjct 2492 TTTGATAGGTGTTTCTGGGGCTTTGATTGTGATCAGGGAATGGAATAATTGATGC-ACAG 2434 Query 252649 ACACCGAAGAT-AGTGCTTGGGTGAATTTCACAGTGACTGTAA 252690 ||||| || || | ||| ||||| |||||||| ||| ||||| Sbjct 2433 ACACCTAATATCATTGC-AGGGTGGATTTCACAATGAGTGTAA 2392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1466676284475006