Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq340 138 1e-26
seq178813 96.9 4e-14
>seq340
Length=3093
Score = 138 bits (152), Expect = 1e-26
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| |||||| ||| | || | ||||| |||||| | ||| | | ||
Sbjct 250 GCTTGGCCAACTCGCCGGGCAACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGA 309
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
||||| | |||||| |||| || || || ||||||| | ||||||| |||| |
Sbjct 310 TCGTGGACCTCTTGTTGTAGTGGGCGAGTCGCGACGCCTCGGCGGCGATGCGCTCGAAGA 369
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||||||| |||| |||||||||| ||| ||||
Sbjct 370 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGAGATGCCGGTGTCCGGGT 429
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| || || |||||||| |||||||||
Sbjct 430 GGACTTGTTTGAGCACTTTGTAGATG 455
>seq178813
Length=1263
Score = 96.9 bits (106), Expect = 4e-14
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
|| || |||||| | | || || || |||| |||||| | || | || ||||||
Sbjct 960 GCGAGCTCGCCGGGAAGGAGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCGTT 901
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
| |||||| |||||||||| ||| ||||||| |||| || || | || |||
Sbjct 900 GACCTCTTGTTGTAGTGCGCCAGGCGGGACGCCTCGGCCGCGATACGTTCAAAAATATCG 841
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527
|||||||| || ||||| | ||||| | ||| | ||||| || ||| ||||| |||
Sbjct 840 TTGACAAAGGAATTCATAATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAACC 781
Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548
||||| | ||| ||||| |||
Sbjct 780 TGCTTCAACACTTTGTAAATG 760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6084765248956246
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |