Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq340 176 7e-38 seq178813 114 2e-19 >seq340 Length=3093 Score = 176 bits (194), Expect = 7e-38 Identities = 186/243 (77%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| |||||| ||| Sbjct 211 TGTACTTGGTGACGGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 270 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || | ||||| |||||| | ||| | || ||||||| | ||||| |||| Sbjct 271 ACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGATCGTGGACCTCTTGTTGTAGT 330 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || ||||||| | ||||||| |||| |||||||| || |||||||| Sbjct 331 GGGCG--AGTCGCGACGCCTCGGCGGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTT 388 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||||| ||| |||||||||| ||| ||||| || || |||||||| || Sbjct 389 CATGATGGACATCGCCTTGCTGGAGATGCCGGTGTCCGGGTGGACTTGTTTGAGCACTTT 448 Query 1485708 GTA 1485710 ||| Sbjct 449 GTA 451 >seq178813 Length=1263 Score = 114 bits (126), Expect = 2e-19 Identities = 170/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 || || ||||||||||| || ||||| ||| ||||| | || || |||||| | | | Sbjct 1002 TATTTAGTGACGGCCTTCGTTCCCTCGCTGACCGCGTGTTTCGCGAGCTCGCCGGGAAGG 943 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || || |||| |||||| | || | | |||||| | |||||| | || Sbjct 942 AGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCGTTGACCTCTTGTTGTAGTGC 883 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 ||||||||| ||||||| |||| || || | || ||||||||||| || ||||| Sbjct 882 GCCAGGCGGGACGCCTCGGCCGCGATACGTTCAAAAATATCGTTGACAAAGGAATTCATA 823 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||||| | || | ||||| || ||| ||||| |||||||| | ||| |||||| Sbjct 822 ATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAACCTGCTTCAACACTTTGTAA 763 Query 1485712 A 1485712 | Sbjct 762 A 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7887244652438082