Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq38040 113 3e-20 seq98588 102 5e-17 seq80369 96.9 2e-15 seq49094 96.9 2e-15 seq22409 96.9 2e-15 >seq38040 Length=2861 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | ||| | ||| || ||||||| ||| || || ||||| || ||||| ||| Sbjct 2237 CCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGAT 2296 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| |||| |||||| || || ||||| || ||||| || ||| | || Sbjct 2297 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGG 2356 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | ||||| || || | | || | ||| | ||| || Sbjct 2357 ATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGATGGCTCCACC 2416 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||||||||||| || || ||||| ||||| || ||||| Sbjct 2417 TCTAGAGTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2463 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || ||||| |||||||| || |||| |||| ||||| ||||| || ||||| Sbjct 1589 TCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAA 1648 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| || ||| | || | ||||| ||||| | || || ||| || | Sbjct 1649 ATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTT 1708 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || || || || || | || || || || || ||||| ||||||||| Sbjct 1709 TCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACA 1768 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 1769 AAGATCTGCAT 1779 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| ||| |||||||| || || || || | |||| |||| Sbjct 1796 AGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCT 1855 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| || || || || || || || |||||| | || | || ||||| || Sbjct 1856 TCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTATCC 1915 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | |||||| || || || || || | ||| | || || || | ||| |||| Sbjct 1916 TGTATTTTAGCCTTCAC--ATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGG 1973 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || | || || ||||| || ||||| Sbjct 1974 TCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 >seq98588 Length=355 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || || || |||||||| ||||| || || |||| |||| ||| Sbjct 322 ACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGACCATCTTCC 263 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || ||||| || || ||||| || | || | ||||| ||||| | Sbjct 262 AATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGG 203 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| ||| ||| | | || | ||| || || || || | || ||||||||| Sbjct 202 ATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTT 143 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| || ||||| |||||||| Sbjct 142 CCAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq80369 Length=3501 Score = 96.9 bits (106), Expect = 2e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 34781 GTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCG 34840 || || |||||||| || || || || ||||| | | |||| || |||||||| || Sbjct 389 GTACTTTCCTTCTGGATATTGTAATCAGATAGCGTTCTAGCATCCTCGAGTTGCTTACCA 330 Query 34841 GCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTG 34900 || ||||| || | ||||| ||| | || | ||||||||||| | ||| ||| ||| Sbjct 329 GCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTCTATCTTTGCTTTT 270 Query 34901 ACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGG 34958 || || || || | ||| | | ||| || || | ||||| |||||||| || | | Sbjct 269 AC--ATTCTCGATAGTATCACTAGACTCTACTTCCAATGTTATTGTCTTTCCTGTTAATG 212 Query 34959 TCTTTACAAAGATCTGCAT 34977 | || |||||||||||||| Sbjct 211 TTTTAACAAAGATCTGCAT 193 >seq49094 Length=1117 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||||||||| || || ||||| |||| |||||||||||||| ||||| Sbjct 1103 TCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAA 1044 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || ||| |||||| | || | || |||||||| | || ||| || || | Sbjct 1043 ATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTT 984 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || || || || | || || || || || || || || || || Sbjct 983 TCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAGTCAGTGTTTTAACG 924 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 923 AAAATTTGCAT 913 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| ||||| | | || |||| ||| | || ||||||||||| |||||||| | Sbjct 229 TTCCACCCCTAAGGCGTAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTG 170 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || |||| |||| |||||||||||||||||||| || | || ||| || ||| | | Sbjct 169 ACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAG 110 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || |||||||| | || ||| || ||| | || | ||| || || | Sbjct 109 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCA 50 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || || || || || || || || ||||| || ||||| Sbjct 49 CTTCCAATGTGATAGTTTTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| || || || | ||| | || ||||||||||| || ||||| | Sbjct 457 TTCCACCTCTCAGCCGTAGTACTAAGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 398 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| |||| |||| || || |||||||| || || || |||| ||| || ||| | | Sbjct 397 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGG 338 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| || || | |||||| || || | | || | ||| || || | Sbjct 337 GAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 278 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || ||||| || || || ||||||||||| || ||||| Sbjct 277 CTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 229 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| | ||| || | || | ||| ||||||||||| || ||||| | Sbjct 913 TTCCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTG 854 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | || |||| || || |||||||| || || || |||| |||||| ||| | | Sbjct 853 ACAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGG 794 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| || || | |||||| || || | | || | ||| || || | Sbjct 793 GAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 734 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || ||||| || || || ||||||||||| || ||||| Sbjct 733 CTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 685 >seq22409 Length=1756 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| || | | || |||| || || || || || || ||| Sbjct 1473 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAG 1532 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || ||||| || | ||||| ||| || | Sbjct 1533 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTCGCTTTTACATTT 1592 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | ||| ||| || || || | ||| ||||| || ||||| |||||||| || Sbjct 1593 TCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 1652 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 1653 AAAATTTGCAT 1663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324610595902922