Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq56742 95.1 2e-14 seq24578 91.5 2e-13 seq93941 82.4 1e-10 >seq56742 Length=3759 Score = 95.1 bits (104), Expect = 2e-14 Identities = 142/195 (73%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 192926 AACGGAAACAGTATCTCATACATTAAATTATCCACAAAAACCCCTTGTTACCACA-GATA 192984 || ||| ||| | ||||| | | | |||||||| |||||||| || || ||| ||| Sbjct 2545 AATGGATACATTGGCTCATGTACTCTACTATCCACATAAACCCCTGGTCACAACAAGATC 2604 Query 192985 T-TGCAAAATTTAATAAATTAGACGATTATCCAAATGGTATTAATGCTATTGTTGCTATA 193043 | || || ||||| | ||||| || | || |||||| ||| |||||||||| || Sbjct 2605 TATGGAATATTTACGAT-TTAGA-GAGTTGCCTGCTGGTATCAATTCTATTGTTGCAATT 2662 Query 193044 GCTTGCTATACTGGTTATAATCAAGAAGACAGTATTATTTTAAATAAAGCTT---CTATT 193100 || || ||||| || ||||||||||| ||| | ||||||||| |||| || || Sbjct 2663 TTATGTTACACTGGATACAATCAAGAAGATAGTGTCATTTTAAAT---GCTTCAGCTGTT 2719 Query 193101 GAAAGAGGATTATTT 193115 ||||||||||| ||| Sbjct 2720 GAAAGAGGATTCTTT 2734 >seq24578 Length=4592 Score = 91.5 bits (100), Expect = 2e-13 Identities = 180/261 (69%), Gaps = 18/261 (7%) Strand=Plus/Minus Query 162922 TATTGATGGTCTTAAAGAATCTCAAAGAAAGGTTATTTATGCCAT----AAGaaaaaaaT 162977 |||||||||||||||| | |||||| |||||||| | | | |||||||| | Sbjct 1649 TATTGATGGTCTTAAACCAGGTCAAAGGAAGGTTATATTTTCTTGTTTCAAGAAAAAGCT 1590 Query 162978 TTAGATCAAAAGGGGATTTTATTAAGGTTGCTCAATTAAGTGGG-TATGTTGCGGAACAA 163036 | || || || ||||| || ||||| ||||| ||| || | ||| | Sbjct 1589 TAAG-------GGAGAA---ATTAAAGTACAGCAATTG-GTGGGATATATTTCTGAAAAT 1541 Query 163037 ACAGACTATAAACACGGTGAACAAAATTTATGTGAAACTATAATTAAGTTT-GCCCAAGA 163095 |||| ||| | ||||| ||||| ||||| | ||| || | |||||| |||||||| Sbjct 1540 GCAGATTATCATCACGGAGAACAGTCTTTATCTTCAACAATTGT-AAGTTTAGCCCAAGA 1482 Query 163096 TTTTGTTGGTACAAATAATATAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATT 163155 |||||||| ||||||| ||| || || |||| ||||||||||| | || | Sbjct 1481 CTTTGTTGGATCAAATAACATAAATTTGCTACTTCCTGTAGGTCAATTTGGCTCTAGGCT 1422 Query 163156 AGAAGGAGGTAAAGATTCTGC 163176 | |||| ||||| |||||||| Sbjct 1421 ACAAGGGGGTAAGGATTCTGC 1401 >seq93941 Length=976 Score = 82.4 bits (90), Expect = 1e-10 Identities = 91/119 (76%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 168653 AGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGA 168712 ||||||| | ||||| ||||||| ||||||||||||||| |||||| ||||| |||| Sbjct 450 AGGTGATCTTGGTCCTGTTTATGGCTTTCAATGGAGACATAGTGGAGCTAAATATGTTGA 391 Query 168713 CTGTG-ATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAACTATAAATACT 168770 || | | || |||| | ||||||||| | || ||| || | | | |||||||||| Sbjct 390 -TGCGAAAACCAATTATGCAGGACAAGGAATTGATCAAATACATAACATTATAAATACT 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633012930618640