Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq56742 87.8 2e-12 seq24578 87.8 2e-12 >seq56742 Length=3759 Score = 87.8 bits (96), Expect = 2e-12 Identities = 170/244 (70%), Gaps = 13/244 (5%) Strand=Plus/Plus Query 192433 CTATGGTTAAACAAGCCATTGG---GTTTATTCCTTGCCACAACTTAAAAACGGAAACAG 192489 |||||| ||| ||||| || || || ||| || | | | | | || ||| ||| Sbjct 2496 CTATGGGTAAGCAAGCTATGGGTGTGTACATTACTAACTTCCATGTTAGAATGGATACAT 2555 Query 192490 TCTCTCATACATTAAATTATCCACAAAAACCACTTGTTACCACA-GATAT-TGCAAAATT 192547 | ||||| | | | |||||||| ||||| || || || ||| ||| | || || ||| Sbjct 2556 TGGCTCATGTACTCTACTATCCACATAAACCCCTGGTCACAACAAGATCTATGGAATATT 2615 Query 192548 TAATAAATTAGACGATTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATAC 192607 || | ||||| || | || |||||| ||| |||||||||| || || || || Sbjct 2616 TACGAT-TTAGA-GAGTTGCCTGCTGGTATCAATTCTATTGTTGCAATTTTATGTTACAC 2673 Query 192608 TGGCTATAACCAAGAAGACAGTATTATTTTAAATAAAGCTTC---TATTGAAAGAGGATT 192664 ||| || || |||||||| ||| | ||||||||| ||||| | ||||||||||||| Sbjct 2674 TGGATACAATCAAGAAGATAGTGTCATTTTAAAT---GCTTCAGCTGTTGAAAGAGGATT 2730 Query 192665 ATTT 192668 ||| Sbjct 2731 CTTT 2734 >seq24578 Length=4592 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 165160 ATTAAAGTTGCTCAATTAAGTGGG-TATGTTGCAGAACAAACAGATTATAAACATGGTGA 165218 |||||||| ||||| ||||| ||| || | ||| | |||||||| | || || || Sbjct 1579 ATTAAAGTACAGCAATTG-GTGGGATATATTTCTGAAAATGCAGATTATCATCACGGAGA 1521 Query 165219 ACAAAATTTATGTGAAACTATAATTAAGTTT-GCCCAAGATTTTGTTGGTACAAATAATA 165277 ||| ||||| | ||| || | |||||| |||||||| |||||||| ||||||| | Sbjct 1520 ACAGTCTTTATCTTCAACAATTGT-AAGTTTAGCCCAAGACTTTGTTGGATCAAATAACA 1462 Query 165278 TAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 165337 || || || |||| ||||||||||| | || || |||| ||||| ||||||| Sbjct 1461 TAAATTTGCTACTTCCTGTAGGTCAATTTGGCTCTAGGCTACAAGGGGGTAAGGATTCTG 1402 Query 165338 C 165338 | Sbjct 1401 C 1401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626389181383680