Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq186579 95.1 2e-14 seq34577 87.8 2e-12 seq104293 86.0 8e-12 seq7666 86.0 8e-12 >seq186579 Length=1782 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1782 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1723 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 1722 CCCGCCGGGGAG 1711 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 1782 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1723 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 1722 CCCGCCGGGGAGG 1710 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1711 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1770 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 1771 TACTACCGAGGA 1782 >seq34577 Length=2381 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/70 (89%), Gaps = 1/70 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 ||||| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 75 CAGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 16 Query 11786 TTCCCCGACG 11795 ||||||| || Sbjct 15 TTCCCCGCCG 6 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 72 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 13 Query 8718 CCCGACG 8724 |||| || Sbjct 12 CCCGCCG 6 >seq104293 Length=1447 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1193 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1134 Query 8718 CCCGACG 8724 |||| || Sbjct 1133 CCCGCCG 1127 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 ||||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||| Sbjct 1120 AACTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 1179 Query 139411 TATACTAACGAGGATT 139426 ||||||| ||| |||| Sbjct 1180 TATACTACCGAAGATT 1195 Score = 82.4 bits (90), Expect = 1e-10 Identities = 61/70 (87%), Gaps = 1/70 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || || ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||| Sbjct 1196 CAATCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 1137 Query 11786 TTCCCCGACG 11795 ||||||| || Sbjct 1136 TTCCCCGCCG 1127 >seq7666 Length=332 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 72 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 13 Query 8718 CCCGACG 8724 |||| || Sbjct 12 CCCGCCG 6 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 72 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 13 Query 11789 CCCGACG 11795 |||| || Sbjct 12 CCCGCCG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 650619921242720