Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq51813 185 8e-42 seq38040 96.9 3e-15 seq49094 87.8 2e-12 >seq51813 Length=3444 Score = 185 bits (204), Expect = 8e-42 Identities = 344/500 (69%), Gaps = 4/500 (1%) Strand=Plus/Minus Query 24794 GTGGCGGCGTACTTTGTCGAGTGGGGTGTGTACCCGCGCCAGTTTCCCGTCGACAAGGTG 24853 |||| || ||||| || || |||||||| || || | |||| ||||| || | Sbjct 1336 GTGGGCGCCTACTTCGTAGAATGGGGTGTCTATCCTAGAAAGTTCCCCGTGGATCGTATA 1277 Query 24854 CCCGCGCCCAACCTCTCGCACTTGCTCTACGGCTTTGTGCCCATCTGCGGCGGCGCGGGC 24913 || || || || | || |||||||| |||||| | ||||| |||||||| | ||| Sbjct 1276 CCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGC 1217 Query 24914 ATCAACGATGCGCTAAAAACTGTGCCG-GGCAGCTTCGAGGCGCTGCAACGATCGTGCGC 24972 || || || ||| |||| | | ||||| ||| | || |||||||| || || Sbjct 1216 ATAAATGACA-GCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAG 1158 Query 24973 CGGCCGCGCCGACTTCAAGGTGGCCATCCACGATCCGTGGGCGGCCATACAGAAACCGCA 25032 |||||| | ||||| || || | ||||||||||| ||||| || |||| ||||| || Sbjct 1157 CGGCCGTGAGGACTTTAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACA 1098 Query 25033 GAAAGGCGTGTCCGCGTGGAACGAGCCGTACAAGGGCAACTTTGGCCAGCTGATGGCGCT 25092 ||||| |||| | ||||||||||| ||||| |||||||| ||||| | ||| | || Sbjct 1097 AAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTCGGCCAATTAATGTCACT 1038 Query 25093 GAAGCGCGCCTACCCGCACCTCAAAGTGCTGCCCTCGATCGGCGGCTGGACGCTGTCCGA 25152 || | ||| |||| | | || | || ||||| || || || |||||||| |||| Sbjct 1037 AAAACAAGCCCGCCCGGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGA 978 Query 25153 CCCGTTCTTCCACATGCACGACAAGGCGGCGCGCCAGACG-TTTATCGACTCGGTGCAAG 25211 || || ||| | || || | | | | ||| ||| | | || || | | Sbjct 977 TCCTTTTTTCTTTTTAGTTGATAAATCTAAGAG-AACACGATTTGTGCAGTCAGTAAAGG 919 Query 25212 AGTACCTCGTCACCTGGAAGTTCTTTGACGGCGTCGACCTCGATTGGGAGTTTCCCGGCG 25271 ||| || | || ||||| ||||| || || || || |||||||||||||||| || | Sbjct 918 AGTTTCTTCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTG 859 Query 25272 GCAAGGGCGCCAACCCGGAC 25291 |||| || || ||||| ||| Sbjct 858 GCAAAGGTGCTAACCCTGAC 839 >seq38040 Length=2861 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| ||||||||||| || ||| ||| | || || | Sbjct 1802 AAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCA-TCTTCCAA 1860 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || | ||||| ||||| ||||| || |||||||||||||| || || Sbjct 1861 TTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGTAT 1920 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||| | ||||| | || || || || | ||| | ||| || || Sbjct 1921 TTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCC 1980 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||| || || || ||||| Sbjct 1981 TGTCAATGTTTTCACAAATATTTGCAT 2007 >seq49094 Length=1117 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| ||||| ||||| || ||| ||| | || || ||||| || || Sbjct 653 GTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCA-TCTTCTAGCTGTTTTCC 595 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581 || |||| |||| ||| ||||||||||| || ||||| ||||| ||| ||||| || Sbjct 594 TGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTGTC-TTGAATTTTTGCCT 536 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || || | | ||||| || | || | |||||||| ||||| | Sbjct 535 TAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATCGTTTTGCCAGTCAGTG 476 Query 133642 TTTTTACGAAAATCTGCAT 133660 | ||||| ||||| ||||| Sbjct 475 TCTTTACAAAAATTTGCAT 457 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| ||||| || || || ||| | | | || || || ||||| || Sbjct 197 GTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCA-TCTTCCAGTTGCTTTCC 139 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | | || || || ||||| |||||||||||||| |||||| ||| Sbjct 138 GGCGAAAATTAATCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTT 79 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| | || || | | ||||| || | |||| |||||||||||||| || Sbjct 78 TACGTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCGGTCAGTGT 19 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || ||||| ||||| Sbjct 18 TTTAACAAAAATTTGCAT 1 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || || ||||| || ||| |||| | | || ||||| |||||||||||||||||| Sbjct 1067 TCTTCCAGTTGCTTTCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTG 1008 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | ||||| | | ||||| || | || | Sbjct 1007 TCTTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATA 948 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || ||||| ||||| |||||||| ||||| Sbjct 947 GTTTTACCAGTCAGTGTTTTAACGAAAATTTGCAT 913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481773313999120