Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq38040 147 1e-30
seq98588 104 2e-17
seq80369 95.1 8e-15
seq60889 87.8 1e-12
>seq38040
Length=2861
Score = 147 bits (162), Expect = 1e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||| |||||| | ||||| || || ||| |||||||| |||||||| |||||
Sbjct 2464 ACCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGA 2523
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| |||| |||||||| ||||| |||||||||||||| || |||||| | ||
Sbjct 2524 AAGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGG 2583
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||||| |||||| | | ||||| || | ||||| | ||| |
Sbjct 2584 AATGCCTTCTTTGTCTTGAATTTT-AGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAA 2642
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||| || ||||| ||||| | ||||| ||||| || ||||||
Sbjct 2643 CTTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCATA 2692
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | || ||||| | ||| |||||||| |||||||| || ||
Sbjct 1553 CCACCGCGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGAC 1612
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || || || ||||| | ||| || |||||| | ||
Sbjct 1613 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGA 1672
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701
| ||| |||||||| || || ||| ||||| ||| ||||| | ||||||
Sbjct 1673 ATACCCTCTTTGTCTTGGATCTTGGCTTT-AACATTTTCAATAGTGTCTGAGGGTTCCAC 1731
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| ||||| ||||| | || ||||||||||||||||||
Sbjct 1732 TTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCATA 1780
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||| |||||| | || | || || || |||||||| || ||||| || ||
Sbjct 2236 ACCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGA 2295
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || |||||||| || || ||||| || | ||| || |||||| | ||
Sbjct 2296 TAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGG 2355
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| ||||| | | |||| || | ||||| || ||||
Sbjct 2356 GATACCTTCTTTGTCTTGGATTTT-AGCCTTTACATTTTCAATTGTGTCAGATGGCTCCA 2414
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || ||||||| || || ||||| || ||||||
Sbjct 2415 CCTCTAGAGTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCATA 2464
Score = 87.8 bits (96), Expect = 1e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| || || ||||||||||| || ||||| || || ||||| || ||||| || |
Sbjct 2704 ACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCC 2763
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
|| |||| ||||||||| |||||||| | | ||| || ||| | || | |||||||||
Sbjct 2764 ATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTT 2823
Query 33654 GTC 33656
|||
Sbjct 2824 GTC 2826
>seq98588
Length=355
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| || ||||| || ||||| |||||||| |||||||| |||||
Sbjct 340 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 281
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||||||| || || ||||| || | |||||||||||| | ||
Sbjct 280 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 221
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || |||||||| ||||| | || || | || | || || | ||||||
Sbjct 220 ATGCCCTCTTTGTCTTGGATTTT-AGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCAC 162
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | || || || || || |||| ||||| ||||| |||||||||
Sbjct 161 TTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 113
>seq80369
Length=3501
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/228 (70%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 33537 TAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTC 33596
|||||| | ||| || || || || || || || |||||||| || || || | | ||
Sbjct 405 TAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGATAGCGTTCTAGCATC 346
Query 33597 GTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656
|| | ||| || || ||||| || | | |||||||||| | || | || || |||||
Sbjct 345 CTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTC 286
Query 33657 GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCG 33715
| || || || || |||| || | || || || || || || || | || || |
Sbjct 285 TTCTATCTT-TGCTTTTACATTCTCGATAGTATCACTAGACTCTACTTCCAATGTTATTG 227
Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGTGTTTA 33763
| || |||||||| ||||| ||||||||||||||| ||||| ||||
Sbjct 226 TCTTTCCTGTTAATGTTTTAACAAAGATCTGCATA-AGGGTGTTTTTA 180
>seq60889
Length=898
Score = 87.8 bits (96), Expect = 1e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| || || ||||||||||| || ||||| || || ||||| || ||||| || |
Sbjct 760 ACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCC 701
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
|| |||| ||||||||| |||||||| | | ||| || ||| | || | |||||||||
Sbjct 700 ATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTT 641
Query 33654 GTC 33656
|||
Sbjct 640 GTC 638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 327611790360960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |