Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq38040 147 1e-30 seq98588 104 2e-17 seq80369 95.1 8e-15 seq60889 87.8 1e-12 >seq38040 Length=2861 Score = 147 bits (162), Expect = 1e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||| |||||| | ||||| || || ||| |||||||| |||||||| ||||| Sbjct 2464 ACCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGA 2523 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| |||||||| ||||| |||||||||||||| || |||||| | || Sbjct 2524 AAGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGG 2583 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| | | ||||| || | ||||| | ||| | Sbjct 2584 AATGCCTTCTTTGTCTTGAATTTT-AGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAA 2642 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||| || ||||| ||||| | ||||| ||||| || |||||| Sbjct 2643 CTTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCATA 2692 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | || ||||| | ||| |||||||| |||||||| || || Sbjct 1553 CCACCGCGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGAC 1612 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || || ||||| | ||| || |||||| | || Sbjct 1613 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGA 1672 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | ||| |||||||| || || ||| ||||| ||| ||||| | |||||| Sbjct 1673 ATACCCTCTTTGTCTTGGATCTTGGCTTT-AACATTTTCAATAGTGTCTGAGGGTTCCAC 1731 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| ||||| ||||| | || |||||||||||||||||| Sbjct 1732 TTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCATA 1780 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||| |||||| | || | || || || |||||||| || ||||| || || Sbjct 2236 ACCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGA 2295 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||||||| || || ||||| || | ||| || |||||| | || Sbjct 2296 TAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGG 2355 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| ||||| | | |||| || | ||||| || |||| Sbjct 2356 GATACCTTCTTTGTCTTGGATTTT-AGCCTTTACATTTTCAATTGTGTCAGATGGCTCCA 2414 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || ||||||| || || ||||| || |||||| Sbjct 2415 CCTCTAGAGTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCATA 2464 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || || ||||||||||| || ||||| || || ||||| || ||||| || | Sbjct 2704 ACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCC 2763 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| ||||||||| |||||||| | | ||| || ||| | || | ||||||||| Sbjct 2764 ATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTT 2823 Query 33654 GTC 33656 ||| Sbjct 2824 GTC 2826 >seq98588 Length=355 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| || ||||| || ||||| |||||||| |||||||| ||||| Sbjct 340 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 281 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||||||| || || ||||| || | |||||||||||| | || Sbjct 280 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 221 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||||| | || || | || | || || | |||||| Sbjct 220 ATGCCCTCTTTGTCTTGGATTTT-AGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCAC 162 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || || || || |||| ||||| ||||| ||||||||| Sbjct 161 TTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 113 >seq80369 Length=3501 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 33537 TAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTC 33596 |||||| | ||| || || || || || || || |||||||| || || || | | || Sbjct 405 TAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGATAGCGTTCTAGCATC 346 Query 33597 GTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 || | ||| || || ||||| || | | |||||||||| | || | || || ||||| Sbjct 345 CTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTC 286 Query 33657 GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCG 33715 | || || || || |||| || | || || || || || || || | || || | Sbjct 285 TTCTATCTT-TGCTTTTACATTCTCGATAGTATCACTAGACTCTACTTCCAATGTTATTG 227 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGTGTTTA 33763 | || |||||||| ||||| ||||||||||||||| ||||| |||| Sbjct 226 TCTTTCCTGTTAATGTTTTAACAAAGATCTGCATA-AGGGTGTTTTTA 180 >seq60889 Length=898 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || || ||||||||||| || ||||| || || ||||| || ||||| || | Sbjct 760 ACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCC 701 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| ||||||||| |||||||| | | ||| || ||| | || | ||||||||| Sbjct 700 ATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTT 641 Query 33654 GTC 33656 ||| Sbjct 640 GTC 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327611790360960