Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq51813 159 3e-34
seq98588 113 4e-20
seq22409 111 1e-19
seq49094 100 3e-16
seq38040 98.7 9e-16
seq157294 87.8 2e-12
seq89394 87.8 2e-12
>seq51813
Length=3444
Score = 159 bits (176), Expect = 3e-34
Identities = 372/549 (68%), Gaps = 14/549 (3%)
Strand=Plus/Minus
Query 24784 GAAAATAACAAGCGTTTCGAG-AAACATCCCGATAAAATTGTAGCGGCTTACTTCGTCGA 24842
||||| || |||| ||| || ||||||| || ||| |||| | || |||||||| ||
Sbjct 1375 GAAAAAAATAAGCCATTCAAGCAAACATCTGGA-AAAGTTGTGGGCGCCTACTTCGTAGA 1317
Query 24843 GTGGGGCGTGTATCAGCGGCAGTTTTCCGTCGACAAAGTGCCCGCGCCCAATTTGTCGCA 24902
||||| || |||| | |||| |||| || | || || ||| | | ||
Sbjct 1316 ATGGGGTGTCTATCCTAGAAAGTTCCCCGTGGATCGTATACCTATACCTAATCTTACTCA 1257
Query 24903 CTTGCTATACGCTTTCGTGCCGATATGCGGCGGCGAGGGCATAAACGACGCTCTCAAAAC 24962
||||| || | || | || || |||||||| || |||||||| ||| || ||||
Sbjct 1256 TTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAATGACAG-CTTAAAAG 1198
Query 24963 AGTTCCC-GGTAGTTTTGAGGCGCTGCAGCGCTCGTGCGCCGGGCGCGACGATTTTAAGG 25021
|| || || ||||| | || ||||| || || || ||| || || || ||||| |
Sbjct 1197 AGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCGTGAGGACTTTAAAG 1138
Query 25022 TAACCATTCACGACCCCTGGGCCGCCATCCAGAAACCGCAGAAAGGCGTCTCCACTTGGA 25081
| | || ||||| || ||||| || | || ||||| || ||||| | || | ||||
Sbjct 1137 TCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGGA 1078
Query 25082 ACGAGCCGTACAAAGGCAACTTTGGACAATTAATGGGCCTGAAATTAGCTAATCCACACT 25141
||||||| |||||||||||||| || ||||||||| || ||| ||| || | |
Sbjct 1077 ACGAGCCCTACAAAGGCAACTTCGGCCAATTAATGTCACTAAAACAAGCCCGCCCGGAAT 1018
Query 25142 TGAAGGTGCTGGCGTCGATCGGCGGCTGGAC-CTTGTCAGATCC---ATTCTTTCACATG 25197
||||| | || | || || || || ||||| |||| | ||||| |||||| |
Sbjct 1017 TGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTG-CCGATCCTTTTTTCTTTTTAGTT 959
Query 25198 CATGACGCGACCGTGCGTCAAACG-TTCATCGATTCCGTCGAGGACTTTCTCTTGACTTG 25256
|| | | | | | | ||| || | | || || |||| ||||| | || ||
Sbjct 958 GATAAATCTA-AGAG---AACACGATTTGTGCAGTCAGTAAAGGAGTTTCTTCTAACATG 903
Query 25257 GAAGTTTTTCGACGGCGTCGACATTGACTGGGAGTTTCCGGGCGGCAAAGGGGCCAATCC 25316
||| || ||||| || || || || || ||||||||||| || |||||||| || || ||
Sbjct 902 GAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGCAAAGGTGCTAACCC 843
Query 25317 TCACGTCGG 25325
| || ||||
Sbjct 842 TGACCTCGG 834
>seq98588
Length=355
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | || ||||||||||||||||||||| | || || |
Sbjct 328 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGACCA 269
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | || ||||| | | |||| |||||||| ||||| || || ||||| |||||
Sbjct 268 TCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTG 209
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||||| ||| | | ||| | |||||| | || |||||||| | || |
Sbjct 208 TCTTGGATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATG 149
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||| || ||||| | |||||||||||
Sbjct 148 GTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114
>seq22409
Length=1756
Score = 111 bits (122), Expect = 1e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || ||||||||||||||||| || ||||| |||||| ||||||||||| | |
Sbjct 1470 GATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCA 1529
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | ||| || || ||||| || || ||||| ||||| |||||| ||| |
Sbjct 1530 AAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTCGCTTTTACA 1589
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | |||||| | | ||||| |||| || | |||||||| || || || ||
Sbjct 1590 TTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTG 1649
Query 132110 ATGAAAATCTGCAT 132123
| |||||| |||||
Sbjct 1650 ACGAAAATTTGCAT 1663
>seq49094
Length=1117
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| || ||||| | | | || || || ||||| |||||||| || ||||| |
Sbjct 899 CGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTGACAGTGTACGTCCA 840
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||||||||| || || | | | ||||| | || |||||||| || ||||| ||||||
Sbjct 839 TCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTA 780
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||||||| || | | ||| | ||||| | | |||||||| | || |
Sbjct 779 TCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATA 720
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || ||||| || |||| ||||| |||||
Sbjct 719 GTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 685
>seq38040
Length=2861
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||| ||||||||||| | ||||||| |||||| | ||| || |||| |
Sbjct 2042 GACTCCTTTTGGATGTTGTAGTCAGATAAGGTACGCCCATCTTCCAACTGCTTGCCGGCA 2101
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| ||||| |||||||||||||| || || |||||||| ||| || || |
Sbjct 2102 AAGATGAGACGTTGTTGATCTGGAGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACG 2161
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | |||||||| || | || | || || || || || || ||
Sbjct 2162 TTTTCAATGGTATCAGATGGCTCCACCTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTG 2221
Query 132110 ATGAAAATCTGCAT 132123
| || || |||||
Sbjct 2222 ACAAATATTTGCAT 2235
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
||||| |||| |||| || | | | || ||||||||||||||||||||| | |||
Sbjct 2471 CGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTG 2530
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| ||||| | || || || | | | || | ||| |||||||||||||| ||||||
Sbjct 2531 CGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCT 2590
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
||||| || |||||| || | | ||| | || || | | || ||||| | |
Sbjct 2591 TCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAC 2650
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||||| || || || ||||| | ||||| |||||
Sbjct 2651 GTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| |||||||| ||||||||||| || || || ||| || ||||| ||||| |
Sbjct 1586 GATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCG 1645
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| |||||||| ||||||||||| || || || ||||| || || || ||| |
Sbjct 1646 AAAATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTTGGCTTTAACA 1705
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||| || | || |||||||| | || | ||||| || || || || |||
Sbjct 1706 TTTTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTT 1765
Query 132110 ATGAAAATCTGCAT 132123
| || ||||||||
Sbjct 1766 ACAAAGATCTGCAT 1779
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
||||| |||| || | || | | | || ||||||||||| |||||||| | |||
Sbjct 2243 CGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGATAGGGTG 2302
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| |||||| | || ||||| | | |||| ||||| |||||||||||||| || |||
Sbjct 2303 CGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGGATACCT 2362
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
||||| || ||||| || | | ||| | || || | |||||||| || |
Sbjct 2363 TCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGATGGCTCCACCTCTAGA 2422
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || || || || || | || || |||||
Sbjct 2423 GTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2463
>seq157294
Length=2047
Score = 87.8 bits (96), Expect = 2e-12
Identities = 232/350 (66%), Gaps = 6/350 (2%)
Strand=Plus/Plus
Query 146656 TACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCTTTGATCTATGAAAGCGTTG-CG 146714
|| || || | ||| ||||| | ||| | ||||| ||||| |||||| |||| ||
Sbjct 275 TATGTTGGTTGCGCAACGAATAAATTTAGTGATTGTGACTGATCAATGAAAA-GTTGACG 333
Query 146715 GTCGGCCGCCATCTCAATCATGCGTTTTGTCTTCATTTCCCAAGCGGTTTTGTACAGCCC 146774
||| ||||||| ||||| | ||| | || |||| |||||| |||||||| ||
Sbjct 334 GTCTGCCGCCAAATCAATTACATTTTTCATTTTAATTTTCCAAGCTGTTTTGTAAAGTTT 393
Query 146775 CTTAACGCTATCTGGAATACCTTCAATGTTTTGAATAGAGCCCTTGTGCGCAAAAAT--A 146832
|||| | || ||| ||| || ||| |||||||| || || | | ||| || |
Sbjct 394 TTTAATGTCATTTGGTATATTTTTAATATTTTGAATTGAACCTTCATATTCAATGATTAA 453
Query 146833 GTGTTTCGTATTTCGGGCGTGTAAAGGTTTAGTTTAATGAGGTCATCAATTAAATACTGA 146892
| |||| ||||| | | | | ||||| |||||| | || | | ||||| | |
Sbjct 454 ATTTTTC--ATTTCATGTGACCACAAGTTTAATTTAATTAAATCTTTCAACAAATATTCA 511
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
||||| | || ||| || || || | | || || | ||| ||| |||||
Sbjct 512 TTGACAATTTTAAATTCACCAGCATGTGTTCTCCTCGTGTAAATGTTGGAAGTAAAAGGT 571
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCAT 147002
|||||| | |||||||| |||||||| | || | |||||||||||
Sbjct 572 TCAAAACATTCATTATTATTAAATATTTGTGAGGTACTGGCGGTAGGCAT 621
>seq89394
Length=1369
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 115649 CGGCTTCTATTACACGGGCGTCGGTGACGAAGTGCGTTGCGCTTTCTGCAAAGTGGAGAT 115708
||||||||||||| |||| ||| || ||||| || ||||| || || ||||| || ||
Sbjct 396 CGGCTTCTATTACCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAAT 455
Query 115709 TATGAGATGGCAGCCCGGAGACGATCCATTGACGGACCACAAACGATGGGCGCCTCAGTG 115768
||||| |||| | || |||||||| | ||||||| |||| |||||||| || ||
Sbjct 456 TATGAAATGGGTAGCGGGCGACGATCCCGCCAAGGACCACCAACGGTGGGCGCCCCAATG 515
Query 115769 T 115769
|
Sbjct 516 T 516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 474986920945680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |