Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq340 138 2e-26 seq178813 96.9 5e-14 >seq340 Length=3093 Score = 138 bits (152), Expect = 2e-26 Identities = 173/234 (74%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| |||||||| || || ||||| |||| |||| |||| |||| | Sbjct 454 ATCTACAAAGTGCTCAAACAAGTCCACCCGGACACCGG-----CATC-TCCAGCAAGGCG 401 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| |||||||||||||| || |||||||| |||| ||||||| | ||||||| || Sbjct 400 ATGTCCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGCCGAGGC--GT 343 Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 ||| || || | || ||||||| | ||||||| | | ||| | |||||| ||| Sbjct 342 CGCGACTCGCCCACTACAACAAGAGGTCCACGATCACGTCCAGGGAGGTGCAGACCTCCG 283 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | || | ||| |||||| |||||| |||||||||| ||| ||||||| Sbjct 282 TGAGGCTCCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 229 >seq178813 Length=1263 Score = 96.9 bits (106), Expect = 5e-14 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||| ||| | |||||||| ||||| || |||| ||| || | ||| || Sbjct 761 ATTTACAAAGTGTTGAAGCAGGTTCACCCGGACAC---TGGG--ATC-TCGAGTAAGGCC 814 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| || ||||| || ||||||||||| || | || || |||| ||||||| Sbjct 815 ATGTCTATTATGAATTCCTTTGTCAACGATATTTTTGAACGTATCGCGGCCGAGGCGTCC 874 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| || ||||||| | |||||| || | || | |||||| |||| Sbjct 875 CGCCTGGCGCACTACAACAAGAGGTCAACGATCACGTCGAGGGAAGTGCAGACCTCCGTC 934 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || || || | | |||||| || || | ||||| ||| |||||| || Sbjct 935 CGTCTCCTCCTTCCCGGCGAGCTCGCGAAACACGCGGTCAGCGAGGGAAC 984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7151514763791356