Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq340 138 2e-26
seq178813 96.9 5e-14
>seq340
Length=3093
Score = 138 bits (152), Expect = 2e-26
Identities = 173/234 (74%), Gaps = 10/234 (4%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||| |||||||| || || ||||| |||| |||| |||| |||| |
Sbjct 454 ATCTACAAAGTGCTCAAACAAGTCCACCCGGACACCGG-----CATC-TCCAGCAAGGCG 401
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| |||||||||||||| || |||||||| |||| ||||||| | ||||||| ||
Sbjct 400 ATGTCCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGCCGAGGC--GT 343
Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088
||| || || | || ||||||| | ||||||| | | ||| | |||||| |||
Sbjct 342 CGCGACTCGCCCACTACAACAAGAGGTCCACGATCACGTCCAGGGAGGTGCAGACCTCCG 283
Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | || | ||| |||||| |||||| |||||||||| ||| |||||||
Sbjct 282 TGAGGCTCCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 229
>seq178813
Length=1263
Score = 96.9 bits (106), Expect = 5e-14
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|| ||||| ||| | |||||||| ||||| || |||| ||| || | ||| ||
Sbjct 761 ATTTACAAAGTGTTGAAGCAGGTTCACCCGGACAC---TGGG--ATC-TCGAGTAAGGCC 814
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| || ||||| || ||||||||||| || | || || |||| |||||||
Sbjct 815 ATGTCTATTATGAATTCCTTTGTCAACGATATTTTTGAACGTATCGCGGCCGAGGCGTCC 874
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || ||||||| | |||||| || | || | |||||| ||||
Sbjct 875 CGCCTGGCGCACTACAACAAGAGGTCAACGATCACGTCGAGGGAAGTGCAGACCTCCGTC 934
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| || || | | |||||| || || | ||||| ||| |||||| ||
Sbjct 935 CGTCTCCTCCTTCCCGGCGAGCTCGCGAAACACGCGGTCAGCGAGGGAAC 984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7151514763791356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |